LOC120559331 (LOC104955230,LOC106567269,LOC101065054)


Basic Information

Item Value
gene id LOC120559331
gene name LOC104955230,LOC106567269,LOC101065054
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 13437589 ~ 13443946 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800978.1
cccacaccACACCAACCCCCCAGCCCAGCTCAACCAATGAGATTAAAGGACTGCACAAGAGAAGGGTTAAATTAAGTATCAAAACACACAGAAGAAATAGTGCTTCTGAAGGTTTGTCAGAAGGTGTGTActggatttttttaaaacagacgTGGTTGAAGAGGATTTGTGAATACAGAAGAACTAGCTGTTATGTTTCAGATTCCTGTTGCAAATGCTGTTAGGACCTAAATCTATGCAAGTTTAGGGTGACATTCGGACTTTGATTAATTGCTGCTCACTACATCAGGTCAAACATGGGTCGCTACCTCTGCACCAACTTGTGTTCAAGTTCTGTGAACAAGACTTTGAGATCATACTGCAAAATTAGGTACCTAATGAGCCTTCTCAGAAAGCACCCTCGTCTGGCTAAAGCACCACTTGGCCCGGACCTCCACAGATATTCACTGCTGTCATCTCCTCATCCGTCCAGATTGATGAGAAAAggaacttttaaaaatgtaaactacAATGATACAGGCTCTACCTCTAACCACTTCCTCAGAGATTTTACCAAAGAACTGAAAAGTCTCCAGCCGGTGCGTTTTTACTCGTCCTCCAATAAGAATACATTCAAACCGGAAGCTCCAATTGGGATCTTTGAGGAGCCTCAGAACAGTTTTCTTTTGAGGTCGCTGGGAGGACGTCTTGGTGAATCATTTAATAGATTGTCCAGACATATTaacatttatttcaagagaatGGATGTTGTACATCTAGCTGAAAATGCCAGCCTTGTTGTCACAACTCCAGAATATCTTGGCAGATCACAAAGGCGTAGTCAAAGTCAACGGGCAGCCAAAGAGAGATATATATCCAAGGGCAAAGACACAACGCAGACCTTGAAAACCAAAGACAAACAGGAGAGCTCAGGAACAAGTCCTTCAAGACAGAACGACTCTGGACTCCAActatttcacatcagcaatttGGCGACAACATTTGGTGAGAGCTACAGTTACGTGGCTAGTCACATTAACTCAGTCTTCTCTCGTGGTtttgcaaaagttaaaatgcAGGAAGATTTGGAAACCATATCTTCCAGCAGAGGGACAAACAAGAGGCTAAAGAGGAGACACATGCAAAACACTTACATCATAACATCTAAAGAAGCGGAAATGTCTCAAGTGAAATTGGGTGCTGATCAGACAACAGTGGAACCTAACAATATCTacagcagctgggaggagggCTACCGCCACTTTGCAAGGCACATCAATAAATACTTTGGTGCCAAGGTTACAGAAGAAGTTGACCAAGATCAGAATAGGAGAGAACAATTTCCTGTGGAAAAGAATAGCACTTacaaaaaacacttttcagCAAAGTCCACCTCACAAACTCAAAGTGCCATGTCTCAACTGAAGCAAGACAAACCTATCATCCATGAAAGTGGAGGCCTTTTCCACAGCAGCCGTAAAACCACTAACTTTGGGGAGAACTTCTTCCAAATGGCCGGTCACATCAATCAATATTTCAAGGGTCAGAGTGGATTGGATAAGGACATTGATAGAATTCTCCTAACGGAGATGGACCCTAAATCTGCTACCTCTGAGAGACTGAAGACTGTATCCTTTATGGACTGCCTTCGCCACCCCACAAGCGCCATCCCTGATTTGCTGGGTGCTTATCTAAAACTGGGACCCTTGTCCCAGACCGGTAAGCTCAAACCGGCTATGACTTCCCCAGAGGCAATGCTGAATAGAAAGGTTGTCTTGAGTCAGAGGCAGGCAGAGGAAATGACACAAGGGTTGATTGGCACTCTGTCACAGTCTTCCTCTCCAGAAGCTCTGACTGCCTGCGTGGAGGCACTCAATGAACACCTTATCCATTACCCATCATGCAAAGCTTTAATGTGGCAGGAGAAAACCGCGGTCACATTGTTAAGAAAGCGAAGAACCTGCAGAGATAACCAGGTGCTTCAGAGCGCCTTAAGAGAAAGCTTTGCTTTAATTGGCTATGTGGATCCAGTCAAAGGCCGTGGCATTAGAGTGCTCTCAATTGATGGTGGTGGCACAAGAGGTGTGGTGCCTTTGCAGGTATTAAAGCTACTGGAAGCTGAGACAGGCAAGAAAATCCACCAGCTGTTTGACTACATATGTGGAGTGAGCACAGGTGCCGTCCTAGCTTACATGCTGGGCCTGGCCCATTTTTCTCTGGAAGAGTGTGCTGACATGTATCGTCGTTTTGGCTCCGAAGTGTTTCGGCAGAACCCGCTGGTTGGTACCGTAAAGATGGGCTGGAGTCACTCTTACTATAGCACTGACACCTGGGAGACAATACTACGAGAAAAGCTGGGAAATAGAGTACTTATCAAAACAGCCAGGGATGAGTTGACTCCTAAGGTTTCAGCAGTCAGCGCAGTGGTAAACTGGGGTACCACTCCAAAAGCCTTTGTCTTCCGCAACTACAACCACAAACCAGGCTCTCTCAGCCGCTACGCCGGAGGCTCAGTCTGCCAGATGTGGCAGGCAGTGCGAGCATCATCAGCTGCCCCAGGATACTTCCAGGAGTTCCCCTTACAAAGTGACATTCACCAGGATGGAGGAATTATCCTAAACAATCCCTGTGCCTTGGCTGTCCATGAGAGCCGTCTATTGTGGCCCAACCAGCCCTTCCAGTGTGTGCTGTCCCTTGGCACCGGTCGCTATGACAATGCAAAGAGGGGACCTGCCACCTCCACCAGCCTGAGGGCCAAAATCAGCACCCTGATCAACAGCGCTACAGACACTGAAGGGGTCCACACCCTTTTGGATGATCTGTTGCCTCCAGACGTGTACTTCCGCTTCAACCCCATGTTGAGTGCTGTGGTGTCCCTGGATGAGAGCCGTCCACGGGCCATGGACCAGCTGCAGAGAGACACCCAGAACTACCTGGAGAGAAACCGGCCCAAACTGGCCAGGCTCTGTTTGGTGCTTGGGGCGGAGCGCTCAGCTGCAAGCAGAACTAAGGACTGGATGAGTGAGAGGGCCTGGGAGATGAAGCAGAGATGGGTGTGAGTAGGTACAGTAGGTTGCATGTCTACATGCAGACGCACACCCCGCGCACGGACACCTATACAGACCATGGactaaataacagaaacaccttAAAGTACAACAACCACCCCGATGTACTGAAGCAATCAGGTTTGTTGTTGAGACCTTGCATGTGTCACTTCAACTCAGTGGTCATTTTTAGCTGTGGCTCTatcagtgttggtcatcttactttaaaaagtaattatttacagttacaaattacttctcccaaatagtaattgagttagtaactc

Function

NR:

description
PREDICTED: calcium-independent phospholipase A2-gamma-like isoform X2

GO: NA

KEGG:

id description
K16815 PNPLA8; calcium-independent phospholipase A2-gamma

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800978.1 True 3313 mRNA 0.47 9 13437589 13443946

Neighbor

gene id symbol gene type direction distance location
nfascb NA coding downstream 2083 13414941 ~ 13435506 (-)
LOC120558460 NA coding downstream 31405 13396016 ~ 13406184 (-)
LOC120559526 NA coding downstream 93636 13339493 ~ 13343953 (-)
LOC120559881 NA coding downstream 109339 13307588 ~ 13328250 (-)
LOC120559884 NA coding downstream 137597 13292514 ~ 13299992 (-)
LOC120559332 NA coding upstream 1297 13445243 ~ 13447764 (-)
LOC120559852 LOC104955226,LOC102789706,LOC101477062 coding upstream 66705 13510651 ~ 13519559 (-)
LOC120559206 LOC103355075,LOC100698283,LOC101476589 coding upstream 76538 13520484 ~ 13527197 (-)
lmod3 lmod3 coding upstream 87933 13531879 ~ 13534915 (-)
LOC120559773 frmd4b,LOC101475124,LOC102291948,LOC102193657,LOC102787077 coding upstream 91455 13535401 ~ 13559677 (-)
G49514 NA non-coding downstream 4494 13432519 ~ 13433095 (-)
LOC120558464 NA non-coding downstream 58726 13376627 ~ 13378863 (-)
LOC120558462 NA non-coding downstream 69216 13366263 ~ 13368373 (-)
LOC120558463 NA non-coding downstream 79784 13355117 ~ 13357805 (-)
G49447 LOC104955234 non-coding downstream 153339 13281987 ~ 13284250 (-)
G49624 oard1,LOC106909399 non-coding upstream 211585 13655531 ~ 13657376 (-)
G49673 NA non-coding upstream 736394 14180340 ~ 14184391 (-)
G49675 NA non-coding upstream 761643 14205589 ~ 14205824 (-)
G49676 NA non-coding upstream 764626 14208572 ~ 14208852 (-)
G49677 NA non-coding upstream 768264 14212210 ~ 14212497 (-)
LOC120558461 NA other downstream 24411 13406785 ~ 13413178 (-)
LOC120558437 NA other downstream 124860 13308360 ~ 13312729 (-)
LOC120558587 NA other downstream 183981 13250986 ~ 13253608 (-)
camta1a LOC103354943,LOC102299287,LOC102779653,LOC102211199,LOC106922242,LOC104961361,LOC107390471,LOC108232047,LOC103144055 other downstream 216251 12924458 ~ 13221338 (-)
prickle3 prickle3,LOC102790576 other downstream 997680 12415603 ~ 12439909 (-)
zgc:66479 NA other upstream 303457 13747403 ~ 13753866 (-)
smim29 LOC104942556,LOC104932788,LOC105416285,LOC106572343,LOC105022745 other upstream 595789 14039735 ~ 14125823 (-)
LOC120558710 NA other upstream 696434 14140380 ~ 14145222 (-)
LOC120558545 LOC104942567,LOC103358644 other upstream 972390 14416336 ~ 14432994 (-)
G49766 LOC103358643,LOC101487433,LOC103144045,LOC101072611,LOC101159823,LOC107094832 other upstream 1088178 14532124 ~ 14534605 (-)

Expression


Co-expression Network