LOC120559332


Basic Information

Item Value
gene id LOC120559332
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 13445243 ~ 13447764 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039800979.1
ATCCACTACACTTGAGTCACCCAATCACCACGCCTCCTTCTATGCTTTCCCGGGGTGGGCTGCGGCTTCTACTATTTACAGTCTGTATGAATTTAACTTTCATTCACCAAAATAGTCGAATGTAAGGACGATAGATAATGTTTGAGGTGTTTCTGTCGAGCGTTTATTTTGAACGAACACTATCAGCGCGTGACTAGCTGTTACTCAACTGCTTGTGTAACACATGCATTGCTGGCTAGTAACATTATGCTAGCTAATGTTACGACAAAGTCAGGTAGCCTACTGTGAGGAAGGAAATTACTTATTTAACGTCATCGGTGTAGCTAGTTTGTTGGCTGTTAAATCAGCACGTTACCGCTGTGGTGGGTTCAGtgtatttgaaaatgttttcccaAGTGAGAGCATGGTTGGTGTCGGGTTTGACCAAATTTCCCAGTTTTGTAAACTCAACGACCGCAATAAGTGTGGCACCTGCCCTCTGCAGCAGGCATCGGCATCGGACCTTCAGCTCCGAGTCTGCAGGTGTCAAGGTGCTGTATGATGGGCTTTGTCCCATATGTGTGACGGAGATCCGCTTCCTCCAATTTCTGCAGAGAAACCGGCCTGGGAAAGTATATTTTATTGATATCTCCCTGCCAGACTATGATGTAGAGAAATACAAGGATGTCAGCTATGAGATGGCCATGGAGGAAATGCATGTAATTGATGAGAAAGACGAGGTTCACCGTGGGATCCCAGCGTTTGCAGTCATTTACAGTGCAGTGGGCCTTGGCTGGTTGGGTCGCTTCATGATGTGGTCACCTGTGAGACCATTCATGGACAAGTCCTATGCCATCTTTGCCAGGAATCGCTTACAGTGGACTGGACGAGGGGAGGAGTGCAGAACGGGACGCTGtgaaaagaaaacgcattgactTGTGACCACAGAGAAAATAAAGTATGTTTCATAAGTTAATTGAATGTGAAGAACTGGATGGTTTTTCCTGCTAACCATCAGTTTATTATGAATCTGTCTGGAAAGATTAAAGACTGTTCTTAGCTGTAGGGAAATATTTGCTGCCTGATTTGGATGTTTATTTTGTGAAGCTATAATTTGCTGCAGAATTTCTTAGCTAGATCTAGACTGTAAGTTTGATTAAACATCTACCACAAAATATCTGAAAATGATAGAGATGTTGATATTACAAGATaaacgcaaaaaaaacaaacacaggagaACACACAGGAAATGGCCTAAATAAAACAATGATGTATAATGTTAAGTGTCATATTGGCATCCAAATAcatgttattaaaaaaagaaaacagttaaaaaa

Function

GO: NA

KEGG:

id description
ko03420 Nucleotide excision repair

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039800979.1 True 1316 mRNA 0.42 3 13445243 13447764

Neighbor

gene id symbol gene type direction distance location
LOC120559331 LOC104955230,LOC106567269,LOC101065054 coding downstream 1297 13437589 ~ 13443946 (-)
nfascb NA coding downstream 9737 13414941 ~ 13435506 (-)
LOC120558460 NA coding downstream 39059 13396016 ~ 13406184 (-)
LOC120559526 NA coding downstream 101290 13339493 ~ 13343953 (-)
LOC120559881 NA coding downstream 116993 13307588 ~ 13328250 (-)
LOC120559852 LOC104955226,LOC102789706,LOC101477062 coding upstream 62887 13510651 ~ 13519559 (-)
LOC120559206 LOC103355075,LOC100698283,LOC101476589 coding upstream 72720 13520484 ~ 13527197 (-)
lmod3 lmod3 coding upstream 84115 13531879 ~ 13534915 (-)
LOC120559773 frmd4b,LOC101475124,LOC102291948,LOC102193657,LOC102787077 coding upstream 87637 13535401 ~ 13559677 (-)
mdfic2 NA coding upstream 161553 13609317 ~ 13616046 (-)
G49514 NA non-coding downstream 12148 13432519 ~ 13433095 (-)
LOC120558464 NA non-coding downstream 66380 13376627 ~ 13378863 (-)
LOC120558462 NA non-coding downstream 76870 13366263 ~ 13368373 (-)
LOC120558463 NA non-coding downstream 87438 13355117 ~ 13357805 (-)
G49447 LOC104955234 non-coding downstream 160993 13281987 ~ 13284250 (-)
G49624 oard1,LOC106909399 non-coding upstream 207767 13655531 ~ 13657376 (-)
G49673 NA non-coding upstream 732576 14180340 ~ 14184391 (-)
G49675 NA non-coding upstream 757825 14205589 ~ 14205824 (-)
G49676 NA non-coding upstream 760808 14208572 ~ 14208852 (-)
G49677 NA non-coding upstream 764446 14212210 ~ 14212497 (-)
LOC120558461 NA other downstream 32065 13406785 ~ 13413178 (-)
LOC120558437 NA other downstream 132514 13308360 ~ 13312729 (-)
LOC120558587 NA other downstream 191635 13250986 ~ 13253608 (-)
camta1a LOC103354943,LOC102299287,LOC102779653,LOC102211199,LOC106922242,LOC104961361,LOC107390471,LOC108232047,LOC103144055 other downstream 223905 12924458 ~ 13221338 (-)
prickle3 prickle3,LOC102790576 other downstream 1005334 12415603 ~ 12439909 (-)
zgc:66479 NA other upstream 299639 13747403 ~ 13753866 (-)
smim29 LOC104942556,LOC104932788,LOC105416285,LOC106572343,LOC105022745 other upstream 591971 14039735 ~ 14125823 (-)
LOC120558710 NA other upstream 692616 14140380 ~ 14145222 (-)
LOC120558545 LOC104942567,LOC103358644 other upstream 968572 14416336 ~ 14432994 (-)
G49766 LOC103358643,LOC101487433,LOC103144045,LOC101072611,LOC101159823,LOC107094832 other upstream 1084360 14532124 ~ 14534605 (-)

Expression


Co-expression Network