si:ch73-217n20.1


Basic Information

Item Value
gene id si:ch73-217n20.1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 14404018 ~ 14409405 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801022.1
TCCTCTATAAATTGCTTGAGCTGAACGCGCTGGTGACATTTGATTTGTGATCTGCTCTTTGACGATCTGTTTACTGCACGGAGCCCCACGGACGACAGACATGAGGAACATCGGGTGGAGTATTTTGGTTTTATCGTTTGCCTTACTTGATTCAgctcaCTTACAGAAGGACTGTTCGGCTCCACGGGAGTACCCGTACGCCAGACTAAGGGGACCGCCGGAGAAATACGGCAGCACATGGACGTTCAGCAGCGGGAAGAAGGTGTATTATGACTGCGGCGAGGACTTTGCTCCATCCAGAGGGAGCCCATCTGTGCAGTGTGTTGATGGAGAATGGACCAGACTGACCCTAAAATGCGAAAAGAGATATTGTGGCAATGCCGGTGAGCTACGCAATGGAGAGTTCTATTATGAAGGCAATTCATTCGTCGGGGAGAAAGTTTATGCTGTATGCAATGCGGGATACACTGTGAAAGGACTCGACTACATGCTCTGCAAGAAGTCTGGCTGGACTGGTGACTTCCCTTCCTGTGAAGAAATCTCAGAGGTAGAGCCCACCTGCTCCACCCCACCTGCAGTGGCCAACTCTGTGAGCAGTGCTGGAGGGCTTTCTGTATACTGGGTGGGAGaatacgtgagcttcgcctgcagtCAGGGTTTCCAGCTGGAGGGACCTCAGCGGGTCACTTGTGGTCCTGGTGGCGTGTGGCAGCCTAAACCCCCTCAGTGCCTGCCTAAAACTGGGTCACCCGGTGTAAAAAGGGGATGCGGTGTGCCAGTAAGCAGGCACAACTCCAAGGCCAGCCTCGCTGACAAGTACATCCAAAGGCCATCTTTCGCTTCTGGTGAAAGAGTCCATTACGTGTGTGCGGTTGGATACATTCAAGCAGGCGGCAGCAGATATCGCACGTGTATCGAGGGAAAGTGGACCCAACTGCAGCTGAAATGTGACCGAAAGTCTTGTGGCTCTGCAGGAGAGATTACAAACGGACAGTTTATCTATACTGGAATAGAGTTTGGAGACACTGCTACAGCGGTCTGTGATGAGGGGTATAATCTTGTAGGACGGGCAACCAGAAACTGCATGAGCAAAGGCTGGGATGGACGTGTTCCTGCCTGTGAAGCTGTGGTGTGTGCGGAGCCTCCAAGAGGGACAAATGCAGAGATCAGCAGCCCTCAGGAGCCACCTTACACATACAGGAGTGTGATTCGCTATCGTTGTCGTGTGGGAACCCTTATTGGACAAAGGCACATTTCATGCACAGAGAATGGGACATGGAGTGATCCTGCACCTACATGCAAAGAAATAACATGTCCATCTCCAAATGTGCCCAACGCCTACTGGATGGGAGCTCAGGCCAAGCTGTACAAAGACAGGGACACTATATCCATCGAGTGTAACCCAGGCTTTACAAAGTTCGGCCCGAGCACGGTTACCTGTGGTGGTGATGGCCAATGGTTCCCTGGCCTCCCCAAATGTACACCTCGTCGCAACGACTGGTGGACCTAGTAAGCTAGTTGAAATGTAAAACTACAATGTTCAACCTAAAACTGCAGTCACTGGAGGATGAAAATAGTCTGAAGTCTTCCTTTCTACAATAAATATTTATCCTATATACCACCTTTA

Function

NR:

description
sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801022.1 True 1627 mRNA 0.51 11 14404018 14409405

Neighbor

gene id symbol gene type direction distance location
taf11 taf11 coding downstream 173612 14228370 ~ 14230406 (-)
LOC120559681 LOC104936655,LOC104942559,LOC101467974,LOC102795863 coding downstream 200058 14195482 ~ 14203960 (-)
LOC120558709 spdef,LOC103372894 coding downstream 210682 14185309 ~ 14193336 (-)
LOC120558702 LOC103355290,LOC102793276,LOC102312415,LOC101471251,LOC100701884 coding downstream 321213 13850446 ~ 14082805 (-)
LOC120558701 LOC106516757,LOC108231961 coding downstream 624927 13754929 ~ 13779091 (-)
dlgap4a dlgap4,LOC100704042,LOC103358645,LOC102796366 coding upstream 25840 14435245 ~ 14517114 (-)
col2a1a LOC103358639 coding upstream 156412 14565817 ~ 14590838 (-)
spryd4 spryd4 coding upstream 207206 14616611 ~ 14620139 (-)
LOC120559225 g6pd,LOC104919647,LOC107391210 coding upstream 275640 14685045 ~ 14698017 (-)
LOC120558823 adcy6,LOC107094831 coding upstream 298013 14707418 ~ 14750021 (-)
G49739 NA non-coding downstream 231 14402710 ~ 14403787 (-)
G49716 NA non-coding downstream 1388 14400015 ~ 14402630 (-)
G49682 uhrf1bp1 non-coding downstream 183400 14220217 ~ 14220618 (-)
G49681 NA non-coding downstream 184238 14219510 ~ 14219780 (-)
G49680 NA non-coding downstream 184839 14218972 ~ 14219179 (-)
G49801 NA non-coding upstream 260048 14669453 ~ 14672001 (-)
G49802 NA non-coding upstream 264223 14673628 ~ 14673848 (-)
G49807 NA non-coding upstream 273305 14682710 ~ 14683985 (-)
G49862 ptges3,LOC102790477 non-coding upstream 453390 14862795 ~ 14865747 (-)
G49876 baz2a,LOC102790184 non-coding upstream 474741 14884146 ~ 14885386 (-)
LOC120558710 NA other downstream 258796 14140380 ~ 14145222 (-)
smim29 LOC104942556,LOC104932788,LOC105416285,LOC106572343,LOC105022745 other downstream 278195 14039735 ~ 14125823 (-)
zgc:66479 NA other downstream 650152 13747403 ~ 13753866 (-)
LOC120558461 NA other downstream 990840 13406785 ~ 13413178 (-)
LOC120558437 NA other downstream 1091289 13308360 ~ 13312729 (-)
LOC120558545 LOC104942567,LOC103358644 other upstream 6931 14416336 ~ 14432994 (-)
G49766 LOC103358643,LOC101487433,LOC103144045,LOC101072611,LOC101159823,LOC107094832 other upstream 122719 14532124 ~ 14534605 (-)
map3k12 LOC104930685,LOC103358642 other upstream 130383 14539788 ~ 14551558 (-)
G49845 naca,LOC107737655,LOC106571941 other upstream 435933 14845338 ~ 14853817 (-)
G50217 fgd3,LOC104966710 other upstream 1871639 16281044 ~ 16283856 (-)

Expression


Co-expression Network