LOC120559391


Basic Information

Item Value
gene id LOC120559391
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 3173356 ~ 3177854 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801083.1
actgttcacaaactgctcccaacagctctattgtagtgaAGCCTTTTCTTCCGTGACGTGCTGACGTCAGCTCGTAACAGAAGTTATAaagctcgcctagctgctaagctcacccctccccccaccaccaccactaatTCAAGTTTGTTAGACCCAGAGCGGCTGGAGAGTTGAGAGTCTCGGTCATGTCCAGGAGACGCTGTATTCGTCAGTGCACGGGGAAATTTCCTCTTTTTCGTCTTCCAAAAGACGATGAATTTAAGAGTCAGTGgttaaaatttgtttttggcACTATTCCCCAGGACTACAACCCCAACCTTATGTTGTGTTCTGCTCATTTTACGGAGGACTGCTTCCTGAACCTGCAACAGTTCAATTCAGGATTTTCAAACCGTTTAATTCTGAAAGACAGTGCAGTTCCGACTCTGTCTGGTCATCATGTAGATTCAGAACCACAACCTAGTACATCACAGCAGCCCTTTGAAACCCCACACCTTTCCACTACATTCCATGACATAGGATGCCAGACTGAACCACCACAAAATATGTCAGTGGGCATACAGTCCAGTGCTCCAAAAATGAGAACAGTTGGCACACAGCTATCCATGGGTACGCTGAGGGCTTCCATGAGAAGCAAAGgcaCCCAGGCAATAGTGCCCTGTGTTAGTGTTTACACTGAGACCACTTCAAGTTCCCCAGAATTCACCCCGATGTCTTCAACACCAATAAGACCCCAAGATTTCAGACCTCACAAGAGACCTCGTCTTGagttggaggaggaggaggaggaagagggagacacCTCAACAGAGTCCAAGCTGAGCCACAAGACTCAACATATATCCCTGGTGACTCTGTTCTAACGGACGATTCTGCCATGTCgtctGAGCCAGTGTCTACTTATAAGGATGATAAGTACATTGTTTTTGAAAGTTGCCTAAGGGAGCTTTTTCAAAGCTGTCCTGTATGCAAGAGGCAGTGTGACGTTCAGCGCCGAAAAATGGGAACGTATGTGTCATTCACACAGCTCTGCCCACACTGCAACTATTCAAGACAGTGGCAGAGTCAGCCTGTTGTAGGAAGTACCCCCGTCGGCAACCTAcacctgtcagcggcaacataTTTCACCGGTTCATCCTTTATCCAACTGGAAAAGATATGCAAGGCCATGAATCTTCAGATTTTCCAGTATGACACCTTCAGGAGGCATGCTAGGAGTTTTCTGGAGCCAGCCATAATCCACAAATGGAAGACGGATCAGCAACATCTTTTTCAAAAGTTACAGCATGGAGGAAAGATTGGAGTCAGTGGAGATATGCGAGCTGACTCCCCAGGGCACTCAGCAAAGTATGGGAGCTACACACTGATGCACCTAGACAGTAACCGCATTATTGACCTTCATCTTGTTCAGAGCAATGAAGTAGGTGGTAGTTACCACATGGAGAATGAGGGCCTTAAACGCTGCCTGGATCTACTGGATTCAAACGGTTTGGTGGTGGACTACATTGTCACCGACCGTCATCCACAGATCCAGAAGTATCTGAGGGAGCGAAGCATCACCCACTTCTATGATGTGTGGCACTTTGAGAAAGgtttgtcaaaaaaaattgaaaaagttGCGCAAAACAAGGACTGCGGGGTGTTGAAGAAGTGGCTGCGTAGCATCAAAAGCCATGTCTACTGGAGTGCAACATCGTCAACATCAGGGCCAGAGAAGGTAGCCAAGTGGATGTCGATGGTCAACCACATCCAGAACGTGCACTTGCATGAAAAACCTCTTTTCCCTAAGTGCCAACATCCTGATCGAGTGTCAAGGGATCCAAGTAAATGGTTTCAACCAGggACAATGGCGCTCTACAAAGTGGGAAAAATCCTGGTCAATAAGAGGGTTGTCAAAGATGTGGAGAAGCTGAGCCACCACTACCAAACATCATCCCTGGAGGCTTTCCACAGTTTGATCCTTCGCTTCACACCCAAGAATGTGGTTTTCCCTTTCATGGGCATGCTTTGCAGGTTGTACCTTGCAGCCATGCACTACAATGAAAATGCAGACCGCGAGCAAGCCACAacatctgcaggacaaccagtATTCAAGGTTGTGTTTCCCAAGTCCAGGAAGGGGGAGGTGACTGCGAGGCCAGTAAAAACAGACCCTACATACAAATATGTGGAAGAATTTATGAGGCTGGTTTTCGAGGAGGTGTTTGAGGACCCAACTCCATTTGTTGAGGTGCTGAAACTGATCCCCATCCCCAAGGACCTGGCATCGGAACATGAGAGACCCTCAAAGGAGGAAGTGGTTGCACGCCATCTGTCCCGCTTTGCTCAAGGGAAAGTCGGAACCGTACATACTAGGCACCCGGATCAAGAAACTGCAGGCGTATCCGGCGTACAACGCACGACGGGATTACCACCCTAACAGTCCTTCCCAAGTAGCCCCAGCACCAGTTGACCAAGCCAAGATAGGCAAGGTGCCTGTAGCGCCTGTATGGACAGGATT
>XM_039801084.1
tcaaaatatgtagaacagtGTACAAGTGTGCATGTGAAGGTATGTTTAGAACGTTAATGCTACTTTACAGGTTGATTGGTAAGGGCACCGAAACCACTGTATAAGCTCAGCTAATTTGGTAGTGTTGGCTAACGTTCTGTAAAGTGGTAAACGACACGTGCTTTTAAGTTGCTTTTGTTACGTGGAGACCGTTGTCCATAACCAACAGTATATTTGCTCCCTACTTACACAACTGGGGCTTTGACTAGCAAAAGGATGTCATGTGGTGTGTTAATTTGTTTATATGCTACTTGTGCTGTCTCCTGATTTCACAAGGGATAAGAAGGTTAGCGTTACAGATACGGACTCTTTTCATCTGATTACTGTCTTATTACAGAGTACATCACAGCAGCCCTTTGAAACCCCACACCTTTCCACTACATTCCATGACATAGGATGCCAGACTGAACCACCACAAAATATGTCAGTGGGCATACAGTCCAGTGCTCCAAAAATGAGAACAGTTGGCACACAGCTATCCATGGGTACGCTGAGGGCTTCCATGAGAAGCAAAGgcaCCCAGGCAATAGTGCCCTGTGTTAGTGTTTACACTGAGACCACTTCAAGTTCCCCAGAATTCACCCCGATGTCTTCAACACCAATAAGACCCCAAGATTTCAGACCTCACAAGAGACCTCGTCTTGagttggaggaggaggaggaggaagagggagacacCTCAACAGAGTCCAAGCTGAGCCACAAGACTCAACATATATCCCTGGTGACTCTGTTCTAACGGACGATTCTGCCATGTCgtctGAGCCAGTGTCTACTTATAAGGATGATAAGTACATTGTTTTTGAAAGTTGCCTAAGGGAGCTTTTTCAAAGCTGTCCTGTATGCAAGAGGCAGTGTGACGTTCAGCGCCGAAAAATGGGAACGTATGTGTCATTCACACAGCTCTGCCCACACTGCAACTATTCAAGACAGTGGCAGAGTCAGCCTGTTGTAGGAAGTACCCCCGTCGGCAACCTAcacctgtcagcggcaacataTTTCACCGGTTCATCCTTTATCCAACTGGAAAAGATATGCAAGGCCATGAATCTTCAGATTTTCCAGTATGACACCTTCAGGAGGCATGCTAGGAGTTTTCTGGAGCCAGCCATAATCCACAAATGGAAGACGGATCAGCAACATCTTTTTCAAAAGTTACAGCATGGAGGAAAGATTGGAGTCAGTGGAGATATGCGAGCTGACTCCCCAGGGCACTCAGCAAAGTATGGGAGCTACACACTGATGCACCTAGACAGTAACCGCATTATTGACCTTCATCTTGTTCAGAGCAATGAAGTAGGTGGTAGTTACCACATGGAGAATGAGGGCCTTAAACGCTGCCTGGATCTACTGGATTCAAACGGTTTGGTGGTGGACTACATTGTCACCGACCGTCATCCACAGATCCAGAAGTATCTGAGGGAGCGAAGCATCACCCACTTCTATGATGTGTGGCACTTTGAGAAAGgtttgtcaaaaaaaattgaaaaagttGCGCAAAACAAGGACTGCGGGGTGTTGAAGAAGTGGCTGCGTAGCATCAAAAGCCATGTCTACTGGAGTGCAACATCGTCAACATCAGGGCCAGAGAAGGTAGCCAAGTGGATGTCGATGGTCAACCACATCCAGAACGTGCACTTGCATGAAAAACCTCTTTTCCCTAAGTGCCAACATCCTGATCGAGTGTCAAGGGATCCAAGTAAATGGTTTCAACCAGggACAATGGCGCTCTACAAAGTGGGAAAAATCCTGGTCAATAAGAGGGTTGTCAAAGATGTGGAGAAGCTGAGCCACCACTACCAAACATCATCCCTGGAGGCTTTCCACAGTTTGATCCTTCGCTTCACACCCAAGAATGTGGTTTTCCCTTTCATGGGCATGCTTTGCAGGTTGTACCTTGCAGCCATGCACTACAATGAAAATGCAGACCGCGAGCAAGCCACAacatctgcaggacaaccagtATTCAAGGTTGTGTTTCCCAAGTCCAGGAAGGGGGAGGTGACTGCGAGGCCAGTAAAAACAGACCCTACATACAAATATGTGGAAGAATTTATGAGGCTGGTTTTCGAGGAGGTGTTTGAGGACCCAACTCCATTTGTTGAGGTGCTGAAACTGATCCCCATCCCCAAGGACCTGGCATCGGAACATGAGAGACCCTCAAAGGAGGAAGTGGTTGCACGCCATCTGTCCCGCTTTGCTCAAGGGAAAGTCGGAACCGTACATACTAGGCACCCGGATCAAGAAACTGCAGGCGTATCCGGCGTACAACGCACGACGGGATTACCACCCTAACAGTCCTTCCCAAGTAGCCCCAGCACCAGTTGACCAAGCCAAGATAGGCAAGGTGCCTGTAGCGCCTGTATGGACAGGATT
>XM_039801085.1
cactgttcacaaactgctcccaacagctctattgtagtgaAGCCTTTTCTTCCGTGACGTGCTGACGTCAGCTCGTAACAGAAGTTATAaagctcgcctagctgctaagctcacccctccccccaccaccaccactaatTCAAGTTTGTTAGACCCAGAGCGGCTGGAGAGTTGAGAGTCTCGGTCATGTCCAGGAGACGCTGTATTCGTCAGTGCACGGGGAAATTTCCTCTTTTTCGTCTTCCAAAAGACGATGAATTTAAGAGTCAGTGgttaaaatttgtttttggcACTATTCCCCAGGACTACAACCCCAACCTTATGTTGTGTTCTGCTCATTTTACGGAGGACTGCTTCCTGAACCTGCAACAGTTCAATTCAGGATTTTCAAACCGTTTAATTCTGAAAGACAGTGCAGTTCCGACTCTGTCTGGTCATCATGTAGATTCAGAACCACAACCTAGTACATCACAGCAGCCCTTTGAAACCCCACACCTTTCCACTACATTCCATGACATAGGATGCCAGACTGAACCACCACAAAATATGTCAGTGGGCATACAGTCCAGTGCTCCAAAAATGAGAACAGTTGGCACACAGCTATCCATGGGTACGCTGAGGGCTTCCATGAGAAGCAAAGgcaCCCAGGCAATAGTGCCCTGTGTTAGTGTTTACACTGAGACCACTTCAAGTTCCCCAGAATTCACCCCGATGTCTTCAACACCAATAAGACCCCAAGATTTCAGACCTCACAAGAGACCTCGTCTTGagttggaggaggaggaggaggaagagggagacacCTCAACAGAGTCCAAGCTGAGCCACAAGACTCAACATATATCCCTGGTGACTCTGTTCTAACGGACGATTCTGCCATGTCgtctGAGCCAGTGTCTACTTATAAGGATGATAAGTACATTGTTTTTGAAAGTTGCCTAAGGGAGCTTTTTCAAAGCTGTCCTGTATGCAAGAGGCAGTGTGACGTTCAGCGCCGAAAAATGGGAACGTATGTGTCATTCACACAGCTCTGCCCACACTGCAACTATTCAAGACAGTGGCAGAGTCAGCCTGTTGTAGGAAGTACCCCCGTCGGCAACCTAcacctgtcagcggcaacataTTTCACCGGTTCATCCTTTATCCAACTGGAAAAGATATGCAAGGCCATGAATCTTCAGATTTTCCAGTATGACACCTTCAGGAGGCATGCTAGGAGTTTTCTGGAGCCAGCCATAATCCACAAATGGAAGACGGATCAGCAACATCTTTTTCAAAAGTTACAGCATGGAGGAAAGATTGGAGTCAGTGGAGATATGCGAGCTGACTCCCCAGGGCACTCAGCAAAGTATGGGAGCTACACACTGATGCACCTAGACAGTAACCGCATTATTGACCTTCATCTTGTTCAGAGCAATGAAGTAGGTGGTAGTTACCACATGGAGAATGAGGGCCTTAAACGCTGCCTGGATCTACTGGATTCAAACGGTTTGGTGGTGGACTACATTGTCACCGACCGTCATCCACAGATCCAGAAGTATCTGAGGGAGCGAAGCATCACCCACTTCTATGATGTGTGGCACTTTGAGAAAGgtttgtcaaaaaaaattgaaaaagttGCGCAAAACAAGGACTGCGGGGTGTTGAAGAAGTGGCTGCGTAGCATCAAAAGCCATGTCTACTGGAGTGCAACATCGTCAACATCAGGGCCAGAGAAGGTAGCCAAGTGGATGTCGATGGTCAACCACATCCAGAACGTGCACTTGCATGAAAAACCTCTTTTCCCTAAGTGCCAACATCCTGATCGAGTGTCAAGGGATCCAAGTAAATGGTTTCAACCAGggACAATGGCGCTCTACAAAGTGGGAAAAATCCTGGTCAATAAGAGGGTTGTCAAAGATGTGGAGAAGCTGAGCCACCACTACCAAACATCATCCCTGGAGGCTTTCCACAGTTTGATCCTTCGCTTCACACCCAAGAATGTGGTTTTCCCTTTCATGGGCATGCTTTGCAGGTTGTACCTTGCAGCCATGCACTACAATGAAAATGCAGACCGCGAGCAAGCCACAacatctgcaggacaaccagtATTCAAGGTTGTGTTTCCCAAGTCCAGGAAGGGGGAGGTGACTGCGAGAATATGTGGAAGAATTTATGAGGCTGGTTTTCGAGGAGGTGTTTGAGGACCCAACTCCATTTGTTGAGGTGCTGAAACTGATCCCCATCCCCAAGGACCTGGCATCGGAACATGAGAGACCCTCAAAGGAGGAAGTGGTTGCACGC

Function

GO: NA

KEGG:

id description
ko04113 Meiosis - yeast
ko04114 Oocyte meiosis

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801083.1 True 2500 mRNA 0.48 11 3173356 3177853
XM_039801084.1 False 2415 mRNA 0.47 10 3173356 3177009
XM_039801085.1 False 2283 mRNA 0.48 11 3173548 3177854

Neighbor

gene id symbol gene type direction distance location
LOC120559388 NA coding downstream 106141 3059497 ~ 3067215 (-)
LOC120558535 LOC103372586 coding downstream 370078 2765018 ~ 2803278 (-)
LOC120558533 NA coding downstream 408480 2762276 ~ 2764876 (-)
LOC120559403 NA coding downstream 412201 2757509 ~ 2761155 (-)
LOC120559408 NA coding downstream 446462 2719103 ~ 2726894 (-)
LOC120559395 NA coding upstream 7424 3185278 ~ 3192170 (-)
LOC120559400 NA coding upstream 74028 3251882 ~ 3253051 (-)
LOC120559411 NA coding upstream 153915 3331769 ~ 3339720 (-)
LOC120559390 NA coding upstream 205836 3383690 ~ 3426321 (-)
LOC120559410 NA coding upstream 280573 3458427 ~ 3459070 (-)
G46856 NA non-coding downstream 14784 3157691 ~ 3158572 (-)
LOC120559426 NA non-coding downstream 43503 3121212 ~ 3129853 (-)
G46803 NA non-coding downstream 101956 3070176 ~ 3071400 (-)
LOC120559428 NA non-coding downstream 113902 3056573 ~ 3059454 (-)
trnaq-cug_3 NA non-coding downstream 228432 2944853 ~ 2944924 (-)
LOC120559427 NA non-coding upstream 269355 3447209 ~ 3450188 (-)
G46816 NA non-coding upstream 338849 3516703 ~ 3517741 (-)
G46920 NA non-coding upstream 340583 3518437 ~ 3518669 (-)
G46979 NA non-coding upstream 526167 3704021 ~ 3704389 (-)
G46995 NA non-coding upstream 652905 3830759 ~ 3831182 (-)
G46698 NA other downstream 825852 2346505 ~ 2347504 (-)
LOC120559407 NA other downstream 837655 2329654 ~ 2335701 (-)
rps21 rps21 other downstream 1928128 1236385 ~ 1245228 (-)
G46199 NA other downstream 2191245 976808 ~ 982111 (-)
LOC120558775 adrm1 other downstream 2235154 933032 ~ 938202 (-)
G46817 NA other upstream 105187 3283041 ~ 3285923 (-)
LOC120559401 NA other upstream 313150 3491004 ~ 3493963 (-)
LOC120559679 LOC103384848,LOC102790723,LOC100693496 other upstream 756657 3934511 ~ 3950171 (-)
G47058 NA other upstream 777172 3955026 ~ 3955529 (-)
G47059 LOC102202574 other upstream 777750 3955604 ~ 3956382 (-)

Expression


Co-expression Network