LOC120559395


Basic Information

Item Value
gene id LOC120559395
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 3185278 ~ 3192170 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801090.1
ttcagaacagacaACAGAGCCGTGGGCAAAAAGAGGCTGGCGAAGTGACGTGAGAGTGTTGACATAATGGAAGACATCGGTGGGCTCCGAgatagcatgctagcattagcagATCAAATCGATCAACACTGGTTATCTGCAGATACTATTTTGACACATATTGATGATTTTGTGGAAATACTAGGGCGGATAAGTGCTCTTCAAGATATATACATAGACGACGaagttttaaattgtttaagaCTGATTGAGCACCGCGTGCATGTGGAAGATGTCCAAGTTCAAGAAGTTAACATTAGCGCTGGTACTACAAGCACAGGTGCTGGACGCCCGCCTCTGGATATTCCTGGCGATAAGCTGGCTAACTTTGTGTTGTCCGGTCTATCAACCCGAGAAATCGCGGATCTGTTTGGTGTGTCATCCAGCACGATTCAGAGGAGATTGGCCGAAGAAGGCCTTAGGGCATCGATTAAGGGCATCAATGCAGCGAGTTGATCCAGGAGCAATCTTTATGCGAAGGTTAACCCTACAGACTGCAAGGCGTCGTCAGTACAATGTTCCTGCACCAAATAGTCTATGGCATATAGATGGCAATCACAAGCTGATCAGGTGGAGGATTGTTGTCCATGGTGGCATTGATGGGTTCTCCAGGCTGATTGTTTACCTAAATTGTGCCACCAACAACAGATCTTCAACTGTTCTTGATGGTTTCATGTCTGCTGTTGGTCAATATGGAGTACCATCCCAAGTTAGATCTGACAAGGGGGGTGAGAATGTTATGGTTGCTCATTTCATGGTACAAACCCGTGGGGAGGACAGGAACTCTCATATTACCGGAAGGAGTGTTCATAACCAAAGAATTGAGCGCCTTTGGAGAGATGTGTACGAAAATGTTCTTGATCTCTACTACGCGATATTCATCCAGTTGGAGGCTGAAGGGTTACTCAATCCTGATCAAGAGATTGACCTGTATGCACTACACAGGTGCTTCATGCCACATATTCAGCATAATCTTCAGCTGTTCAAGGAGGCATGGAATCATCATGGACTGAGGACTGCAAGCCACCGTTCACCTTTGCAGTTGTGGTTATTAAATCACAAAGAGGGACAAGATGTCTCACAGGTTGATGAGGATTATGGTGTCGACTGGGAGGGACCACATACTCCCTGTGCATCTTTTGTCAGTGTTCCTGAGATCCAGCTCCTGCGCCCATTGAGTGAACATGAACTTGCAGCCCTACCAAACTGTAATGTTCCTTTCGGTGAAGCATTGGCAGTTTACATTGAAACTGTTCAGACACTCAAAGGCATGTTAAACCAAGAACCTTAGGTCAAGAACAGTTTCATCGGGAAAACTAAGGCTACATCTACATTGCTATGCTTCGGTTTTTAAGTGtttgagttttgagccaaaagcgatctaGGTGCACCaagtgtttttatctccagtacATTACATTCTGGTATGCTGGACATAAAAAGGAGGCAGCGTGGAGATTGTGCCCGCTGCTGGTAGTTACCATGGTAAGgttagtagcttagtctcagagaacgagacgttgtgaccgataagacccaatcTGGTGGAGAATCGTTGgtgtcggtgttgccaaaggttTGCGGCCGTTGAGGCTGAAACACAACCCtccagattccaaaccaaaacgggtcagaagtgtttccaaatgtctccggtttaggggctcggaaacaccagagcagggggaatgagagggggacacgTAGCAAAAGACGTAACAGTGTAAAATGTAACCTAAATTGAAGGAATAACTTTGTGAAATCAAAAATTGGAAGCGACGATATGGTGCAATCTGTATCATCATTTTGTCtatattcattattttaattCAGTCACAAATGTGCAGTTGGCTATATTTAATGCTAATCTACTTATTTGCTTTATTTATATTGCCATATTATATTTTTAGAACAAGGCTGATGACTGTAGGCCCAAGACAAAAAAAGCCAAAGAACATCATGTCAGATTACAAGGCTTAGTTTAAGAAAGTAGTTAAATGTACACTAAAGTGCTAGGTGgagtacaataaaaaaaaaaagaaatgtacaaatttgaaagtatttgtttattttgaataACTGTTAAAGGTAAGCATGCATTTAATTGCATGcattactatttgtgtgtgtgtgcctgtgtatgCGTAGCTTGAGATGACAAACACATACTCTCTGTAACAATCATTCTACATACATTGTAtattgattttagccaaaagcAGATTGATCATCCTCCCAGTTACTGGCTACAACAATTCAGTAGAGGGcctaaaaaaagtgatacagaCAATTAATAATATAAACGTTAGTATAAACTTTACAAAATGACCACATAAGTGTTAACACATTACATTCAGTAAATATGTGTGCAGTTTAATTAAAACAGTGTACGAGTAGGAGAGGTGATTAGTGCCGAACATATGGGGGCCAGGTTGCCTGTTTCATTGCATGTCTCAGATTGTCTTCTcatttacagtttggtcgaaCAGAAAGCCCTTAAAAACTCTGCAAAGAAGTTCCATAGCCATCATcgagtttagcaaatcaagcaaaacaaagattacagTTTTAAAAGCAGAATATAAAACCCTTCTTCtaggggaatttctgagtctcaaagtcagcATATCCGaattacagtttaaaaactgctagggctgtgctcgattgaagaaattcttagtcga

Function

GO:

id name namespace
GO:0030983 mismatched DNA binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801090.1 True 2726 mRNA 0.42 6 3185278 3192170

Neighbor

gene id symbol gene type direction distance location
LOC120559391 NA coding downstream 7424 3173356 ~ 3177854 (-)
LOC120559388 NA coding downstream 118063 3059497 ~ 3067215 (-)
LOC120558535 LOC103372586 coding downstream 382000 2765018 ~ 2803278 (-)
LOC120558533 NA coding downstream 420402 2762276 ~ 2764876 (-)
LOC120559403 NA coding downstream 424123 2757509 ~ 2761155 (-)
LOC120559400 NA coding upstream 59712 3251882 ~ 3253051 (-)
LOC120559411 NA coding upstream 139599 3331769 ~ 3339720 (-)
LOC120559390 NA coding upstream 191520 3383690 ~ 3426321 (-)
LOC120559410 NA coding upstream 266257 3458427 ~ 3459070 (-)
lrrc38a LOC103362254,LOC104932799,LOC101069713,LOC101473207 coding upstream 341909 3534079 ~ 3553937 (-)
G46856 NA non-coding downstream 26706 3157691 ~ 3158572 (-)
LOC120559426 NA non-coding downstream 55425 3121212 ~ 3129853 (-)
G46803 NA non-coding downstream 113878 3070176 ~ 3071400 (-)
LOC120559428 NA non-coding downstream 125824 3056573 ~ 3059454 (-)
trnaq-cug_3 NA non-coding downstream 240354 2944853 ~ 2944924 (-)
LOC120559427 NA non-coding upstream 255039 3447209 ~ 3450188 (-)
G46816 NA non-coding upstream 324533 3516703 ~ 3517741 (-)
G46920 NA non-coding upstream 326267 3518437 ~ 3518669 (-)
G46979 NA non-coding upstream 511851 3704021 ~ 3704389 (-)
G46995 NA non-coding upstream 638589 3830759 ~ 3831182 (-)
G46698 NA other downstream 837774 2346505 ~ 2347504 (-)
LOC120559407 NA other downstream 849577 2329654 ~ 2335701 (-)
rps21 rps21 other downstream 1940050 1236385 ~ 1245228 (-)
G46199 NA other downstream 2203167 976808 ~ 982111 (-)
LOC120558775 adrm1 other downstream 2247076 933032 ~ 938202 (-)
G46817 NA other upstream 90871 3283041 ~ 3285923 (-)
LOC120559401 NA other upstream 298834 3491004 ~ 3493963 (-)
LOC120559679 LOC103384848,LOC102790723,LOC100693496 other upstream 742341 3934511 ~ 3950171 (-)
G47058 NA other upstream 762856 3955026 ~ 3955529 (-)
G47059 LOC102202574 other upstream 763434 3955604 ~ 3956382 (-)

Expression


Co-expression Network