cort (cort,LOC101173302,LOC102226263,LOC100698045,LOC103363980)


Basic Information

Item Value
gene id cort
gene name cort,LOC101173302,LOC102226263,LOC100698045,LOC103363980
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 24356788 ~ 24358011 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801166.1
AGGGGTAGAGGTATAAAAGAGTGAGGGACTTTGGAGGTAGAGCAGAATAAACATCAGTGGTTTCCAAATCTTGTGACCAGCTGCCAGCAACTGCACTTCCTCCACCACTTTCCTCTGGATCTCTGAGCTGctcagactctctctctctccttctccaacacacactcacacactcttatCTCTGTGAGCCTCCTGTGACTGTAGCCCTGGTCCGTCACCTGCACTCCTGCCACAGCATGCAGCTTCTGGTGGTGTTAGCAGCTCTCATGGGGGTTCTGTTCAGCGTTAGAGCAGCCGCCGTGCTCCCTGTGGAGGATAGGAGCTCCATCCATGTCGACAGGGAGCTGAGCAAAGAGCGCAAGGATCTGATTCTGAAGCTGGTGTCTGGCTTGTTGGATGGAGCTCTGGACACCAACATGTTGCCGGGGGAAGCTGCACTTGTGGATCTTGAGGAGCCGCTGGAGTCCCGTCTGGAGGAGAGGGCCGTCTACAACCGGCTATCACTGCCTCAGCGCGACCGCAAAGCCCCCTGTAAAAACTTCTTCTGGAAAACGTTCACCTCCTGCTAACAGTGCCCCAAAACACCCGGCTCTGCCTGCCTACTGTACGCCTTCCCTGCCAGCTCCACATGAACTGTAGTAGACCTCAGCTGTACATATCATCTACACCTGTCAGACACGCGGCATCGATGGACTTCACTGACACAGTGTGTCTGTTTGaatattaattatttatgtatctatttatgtatacaatgtatgtatttatgtatgtagcCGTTTCTTTCAGGGTCAATAAAGCATGGATATAACATTTGA

Function

symbol description
cort Enables G protein-coupled receptor binding activity and neuropeptide hormone activity. Involved in adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway. Predicted to be located in extracellular region. Predicted to be part of FANCM-MHF complex and Fanconi anaemia nuclear complex.

NR:

description
PREDICTED: somatostatin-1B-like

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005179 hormone activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801166.1 True 818 mRNA 0.51 2 24356788 24358011

Neighbor

gene id symbol gene type direction distance location
pex14 pex14 coding downstream 37785 24266174 ~ 24319003 (-)
tardbpa tardbp,LOC106534252 coding downstream 334916 24008001 ~ 24021872 (-)
lzic lzic coding downstream 462604 23891799 ~ 23894184 (-)
her9 hes4,LOC102778090 coding downstream 654359 23700576 ~ 23702429 (-)
perm1 LOC103364029 coding downstream 716390 23629441 ~ 23640398 (-)
srm srm coding upstream 2941 24360952 ~ 24365511 (-)
exosc10 exosc10,LOC102796841 coding upstream 12407 24370418 ~ 24384608 (-)
cntn3a.2 LOC103363983,LOC100703160,LOC104954126,LOC102301181,LOC102197109 coding upstream 32186 24390197 ~ 24427068 (-)
si:dkey-178k16.1 epb41l1,LOC103363988,LOC102294250,LOC102199659 coding upstream 276760 24634771 ~ 24671798 (-)
edn3b NA coding upstream 330588 24688599 ~ 24697982 (-)
G52732 NA non-coding downstream 29812 24325020 ~ 24326976 (-)
G52706 NA non-coding downstream 248074 24108484 ~ 24108714 (-)
G52692 NA non-coding downstream 343537 24012963 ~ 24013251 (-)
G52681 NA non-coding downstream 354765 23980748 ~ 24002023 (-)
G52746 NA non-coding upstream 9138 24367149 ~ 24367469 (-)
G52765 NA non-coding upstream 27892 24385903 ~ 24386621 (-)
G52776 chl1,LOC101079354 non-coding upstream 108023 24466034 ~ 24468019 (-)
G52818 NA non-coding upstream 347506 24705517 ~ 24706004 (-)
G52883 NA non-coding upstream 562705 24920716 ~ 24945315 (-)
masp2 masp2,LOC106536928,LOC103357864,LOC107086886 other downstream 17332 24335149 ~ 24339456 (-)
G52501 eno1,LOC104965722,LOC103151087 other downstream 1037104 23308500 ~ 23319684 (-)
si:ch211-150o23.3 LOC103367744,LOC101075068 other downstream 1137888 23214098 ~ 23218900 (-)
G52226 NA other downstream 1826080 22529606 ~ 22530708 (-)
LOC120559880 LOC104932903,LOC103358260,LOC104967532,LOC107390844 other downstream 2127367 22223149 ~ 22229421 (-)
phactr3a LOC100701276,LOC107550338,LOC107551495,LOC104947949,LOC103365918,LOC106955159 other upstream 392420 24750431 ~ 24785005 (-)
acot7 acot7,LOC102782704 other upstream 1552744 25910755 ~ 25972322 (-)
emc1 NA other upstream 1778987 26136998 ~ 26147245 (-)
G53196 NA other upstream 1854982 26212993 ~ 26214882 (-)
LOC120559114 LOC101164642,LOC104966947,LOC100690915,LOC104926428,LOC102195969,LOC101062277 other upstream 2034001 26392012 ~ 26402310 (-)

Expression


Co-expression Network