cbln4 (cbln4,LOC102783801)


Basic Information

Item Value
gene id cbln4
gene name cbln4,LOC102783801
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 9287548 ~ 9292138 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801181.1
GACACGGATTGTCTCACTCGGATATGGCACATCTCTGGATCCAATAAGAGAATTTCACAGCGTCAGACGCGTCTGCGGCGGCAGAGACCAGCGGAGGGACTCGGAAACTTGTGCGGCGCAGGAgacggtctctctctcttttggaaTCGGCGCTGCCACGGctgtcacagagagagacagagccatGTTGAACTCCCTCGTACTGATGCTCAGCTGGACGGTGATCTCCGAAGTGGCGAGAGCCCAGAATGACACGGAGCCTATCGTCCTGGAGGGGAAATGTCTCGTGGTCTGCGACTCCAACCCGACCACGGACTGGAAGGCTTCGTCCTCCCCGCTCGGCATCTCAGTGCGCGCCGCCAACTCCAAGGTGGCTTTCTCTGCAGTCCGGAGCAACAACCACGAACCGTCGGAGATGAGCAACAAAACGAGAATAATCTACTTCGACCAGGTTCTTGTGAATATAGGAAACTACTTCACATTTGAATCAGTATTTTTGTCCCCAAGAAAAGGCATCTACAGTTTTAACTTCCATGTCATTAAAGTGTACCAGAGCCAAACCATACAGGTGAACTTAATGTTGAATGGGAAACCAGTCATCTCTGCCTTTGCGGGTGACAAAGATGTAACTCGTGAGGCGGCCACCAATGGAGTTCTGCTCTATCTAGAAAAAGAGGACAAAGTCTACTTAAAGCTGGAAAAGGGAAACCTAGTTGGTGGATGGCAATACTCAACATTTTCTGGCTTTCTTGTGTtccctctgtaaaaaaaaaaaaaaaagaaaaagaaaagaagattgTAAGCTCACTGACTTCTTCATAATGTGTTGTCACTGTGTAATCAAAACATTGCGGCTGCGTCCGTTGGATCTTGCAAAATTGTTGAAAAATGATAGATGGAAGTGgatcagagcagagagagaggaaatatGACTTTGGAAATCGTTCACATTCTCTGGATGTGCCGAGTCCTCGTTCAGCTGAAAGAGACTTGAAATCTTCCCTATCGCTACTCTATGTTCCTGTCACTCAAGCAGCCTCAGAGAGAGGGACGCTAAAACATCCCAAAAGTACTTTTTGAACTTTGACTTGTCAGAGTATATTTAGCATACTGATGTTTTTCATGGCAACTGTTTGCATTCAAGTACATCTGCTTTTTAGGTGTAAACTGTAAATGCTTGTGTTATTTTTGTGACTTGTCATCACCAAAGTATTCACCTTGTAAGTATTGGGAGGGCATCTTCTCTGGAGCCAATTGTTCCTGATCAAGAGTTGGTCAAATGAGAGGAGTGATGAAACAAATTTTTGAATTTGATTTTAAATGCTTATTGTTAATTGTAAAGCGTGTTAAGTGATCAAGGAATGGATGGATCTGAATAGGCCTACCGGGGCACAGGGCCCCCTGGTCATAGGAAACCTGGTCACAGGGCCCCTGGGCCCCCTAACCCATTGGGCTCCCTGGGCTTCACCTGTAATGTCACTAAAAGCCTTTTACAAGTCTGTGCCCAGGGGCCCGTTGTGTCATAATCCGTCCATGATCAGAGGTCAGATTTAAACATATGTATGAACATTTATGCTCACTGCTGTTTTGCTTTTGATGAATTATAGTGGTCAGTTTACTTTAACACTCTCTCCTAGAAATCACATTTATATTCCACAAATGTGCTTTGAGGGAAACGTAATTCTTGCCTGGATTGTGTGCAGTTGCAAAGTTATCGTCAATGACAATTTATTATTACCTGTGGCTGTGGACACTGGGGTTAGCATCCTGAGTCCAACGCACAGTCAGCTTTAGTCTACAGAAGCACTTTGGTTACAGAGGCTGTAATCAATGTTTTTACATGAACAATTGACCAAATGACTACTTGTATGTGAACAGGGTTGCATGTAgtgatgaacacacacagagagtaaTCAACCGACTGCGGTTCCCTTAAAATTTCACTttcagttttttaacattaatatgcattcccccagcctgcctatggtcccccagtggctagaaatggtgataggtgtaaaccgagccc

Function

symbol description
cbln4 Orthologous to human CBLN4 (cerebellin 4 precursor).

NR:

description
PREDICTED: cerebellin-4

GO: NA

KEGG:

id description
K24235 CBLN; cerebellin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801181.1 True 2032 mRNA 0.45 3 9287548 9292138

Neighbor

gene id symbol gene type direction distance location
bcas1 NA coding downstream 88574 9180687 ~ 9198974 (-)
znf217 NA coding downstream 112334 9168882 ~ 9175214 (-)
zfp64 zfp64 coding downstream 297237 8985972 ~ 8990311 (-)
sall4 sall4 coding downstream 343741 8937739 ~ 8943807 (-)
LOC120559208 atp9a coding downstream 354259 8883251 ~ 8933289 (-)
LOC120559472 LOC104950550,LOC105926880,LOC102779557,LOC106567326,LOC106567306 coding upstream 20748 9312886 ~ 9354630 (-)
irx7 LOC103370648 coding upstream 77823 9369961 ~ 9371630 (-)
nol9 nol9 coding upstream 229957 9522095 ~ 9535683 (-)
klhl21 klhl21 coding upstream 256532 9548670 ~ 9685634 (-)
LOC120558654 LOC103359731 coding upstream 495227 9787365 ~ 9881696 (-)
G48311 NA non-coding downstream 2296 9284917 ~ 9285252 (-)
G48306 NA non-coding downstream 5026 9282296 ~ 9282522 (-)
G48285 NA non-coding downstream 74723 9210924 ~ 9212825 (-)
G48255 NA non-coding downstream 198805 9077075 ~ 9088743 (-)
LOC120558360 NA non-coding downstream 541036 8743335 ~ 8746512 (-)
G48430 NA non-coding upstream 272826 9564964 ~ 9565214 (-)
G48436 NA non-coding upstream 468752 9760890 ~ 9762449 (-)
LOC120558310 NA non-coding upstream 471930 9764068 ~ 9766189 (-)
G48479 NA non-coding upstream 600830 9892968 ~ 9893826 (-)
G48477 cptp non-coding upstream 624440 9916578 ~ 9918879 (-)
LOC120559289 LOC106911506,LOC106515592 other downstream 582065 8702965 ~ 8705483 (-)
ada ada other downstream 877814 8381117 ~ 8409734 (-)
G47934 LOC103363443,LOC106920718,LOC105016959,LOC102211704,LOC108251018 other downstream 1099997 7771936 ~ 8187551 (-)
G47937 gpr182,LOC103467901,LOC103130457,LOC106963994 other downstream 1400698 7815151 ~ 7886850 (-)
G47814 NA other downstream 1788746 7485427 ~ 7498802 (-)
LOC120558858 LOC103370645,LOC100704217,LOC102196282,LOC102305949,LOC101463755,LOC102780123 other upstream 86862 9379000 ~ 9408403 (-)
plekhg5b plekhg5 other upstream 135068 9427206 ~ 9519455 (-)
olfml3a LOC103359736,LOC104967461,LOC102308353,LOC101465779,LOC102785892 other upstream 397591 9689729 ~ 9724134 (-)
c1qtnf12 fam132a other upstream 435736 9727874 ~ 9753686 (-)
hipk1a LOC103359735 other upstream 474173 9766311 ~ 9785241 (-)

Expression


Co-expression Network