zgc:193690 (LOC104936306,LOC102788238,LOC100707688,LOC102213016,LOC101470444,LOC102313919)


Basic Information

Item Value
gene id zgc:193690
gene name LOC104936306,LOC102788238,LOC100707688,LOC102213016,LOC101470444,LOC102313919
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 9925177 ~ 9933192 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801489.1
GTCGCGGTTGGTCCAGGTCAGGAGCAGCGGCACGTCGTCACTTCACTTTGACGCACATCATTCACGCTGACATCAaacttttgataaaaaaaaattgttgtttCTTTCGAAAGAAACGCACAATTAATGTTTGAAAATGTCCGAAGACTCGTGGGCGGTTGCTGTGGATGTCCAAGAAGCCACAAATCCATCCACACAGTTTGACTTTTCAAAGAAAGTTGAGCGACTGCGTGGTCCTCGTAACATAAGAGGAGACATAAATGGCAACATATTGCCAGAGAAGACTGAAAATGGAGGTTCGAAAAGAGAGGCAGAAAAAGTGGACCTGGCTGAACAGTCCCTGTTGAATAAGCTGATCCGCCGCTCTCTGGTGCGGAACAGAAACCAGGTGGAGGTCCTGCAGCGGGACCCCACCTCTCCTCTCTACTCCGTCAAGACATTTGAAGAGCTGAGGCTGAAACCTGAGCTACTGAAGGGCGTGTACAACATGGGTTTCAACAGACCATCCAGGATCCAGGAGAATGCCTTGCCCATGATGTTGGCACAGCCACCTCAGAATCTGATCGCCCAGTCCCAGTCTGGCACGGGTAAAACTGCTGCTTTTTCTCTTGCCATGCTCAGCCATGTAAACCCGGACAATAAGTGGACCCAGTGCCTTTGCATCGCGCCAACATATGAGCTCGCTCTGCAGATCGGCCAAGTAATCGAGCAAATGGGGGCATTGTGCCCTGATGTGAAACTGGCTTACGGCATTCGGGGCAACAGACTGGAGCGAGGCGTCAAGTTGCAGGAGCAGATTGTCATCGGAACACCAGGCACAGTCCTCGACTGGTGCACCAAGTACAAACTCATTGACCCCAAGAAGATTACTATGTTTGTGCTCGACGAGGCTGATGTGATGATCGCCACGCAAGGCCACCGGGACCAGAGCATTCGGATCCATAGACAGCTGACAAAGGACTGCCAGATGCTCCTTTTCTCTGCAACCTTTGAGGACTCTGTGTGGAGGTTTGCAGAGCAGGTGGTTCCCGATCCCAACATCATCAGGCTGAAGCGTGAGGAGGAGACACTGGACACAATCAAGCAGTTCTACGTGCTCTGTAGGGAGAAGGAGGACAAGTTCACAGCACTCTGTAATCTTTATGGGAGCCTTACCATTGCACAGGCCATGATCTTCTGCCATACTCGCAAGATGGCTGCTTGGCTGACTGCGAACCTGACCAACGAGGGTCACCAGGTGGCGTTACTGAGCGGGGAAATGACCGTGGAGCAGAGAGCTGCCGTCATCGATCGCTTCAGGAACGGCAAGGAGAAGGTCCTGGTGACCACAAACGTGTGCTCCAGGGGTATTGACGTGGAACAGGTGTCACTTGTGGTCAACTTTGACCTGCCTGTGGACATGGATGGGAACGCCGACAATGAGACCTACCTTCACCGGATTGGCCGCACAGGACGCTTTGGCAGAAGGGGATTTGCCGTCAACATGGTTGACAGCAAACACAGCATGGATGTCATCAACCAAATTGAGATGCATTTCAACCGGAGAATCACGAAACTTGACACGAGCAATCTGGAAGAAATGGAAAGCCTGATCAGCTGAATGCTTCGCTACGAGCACTACCAAAGCCTGACGCCGTTAGACGTGTTACCTCATATTTGACCTGAGTTCTTTCCAgggtttgtttgcattttattgtttaCAGAAGAAAGATGCATACTAATATTAACTATGCAGACTTATTTCACGGCCGTCATTTTTGCCAAAGTTCTTTAATTTGATGTGTCCGACTTTGATCACTGAAGTCACCTTAAGCCTTTAAGCTGTCTCCCAGAGCCTATAAAGCAATCACTAGCTGTTAAAACGGCATTTAAGAAGAGGAGTGGTGATAATGTTTGTTAGATAATCTGAGGTGAATTCTTACTGTAGGATGTGTCTCATCTATAGATCAAGGTTGAGTTCAGATAAAATATCCTTGAGTGACTTGAATCATTTTAAGGTTTAAATGCCTTTTTCAGTCGTAGGTGTAGTTGACGGTTTACTGATAACTTAATTTGATCAATGACTGTGAAGCCAGAGCTGTTgctcattttttttgtgtgcttaaaaaaataaatatattgttgcatattaaa

Function

NR:

description
PREDICTED: ATP-dependent RNA helicase DDX19B

GO:

id name namespace
GO:0006200 obsolete ATP catabolic process biological_process
GO:0005524 ATP binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801489.1 True 2133 mRNA 0.48 11 9925177 9933192

Neighbor

gene id symbol gene type direction distance location
ints11 cpsf3l coding downstream 9042 9904308 ~ 9916135 (-)
LOC120558325 NA coding downstream 23519 9890555 ~ 9901658 (-)
LOC120558654 LOC103359731 coding downstream 43481 9787365 ~ 9881696 (-)
klhl21 klhl21 coding downstream 239543 9548670 ~ 9685634 (-)
nol9 nol9 coding downstream 389494 9522095 ~ 9535683 (-)
mul1b mul1 coding upstream 45061 9978253 ~ 9985133 (-)
LOC120558779 LOC101471596,LOC102789400,LOC103365659 coding upstream 161721 10094913 ~ 10109100 (-)
LOC120558781 LOC105013598,LOC108237630,LOC101472165,LOC107390417,LOC101079871 coding upstream 198499 10131691 ~ 10136381 (-)
si:ch73-206d17.1 NA coding upstream 383627 10316819 ~ 10325211 (-)
ptpn22 LOC106912495,LOC103467961 coding upstream 609741 10542933 ~ 10566475 (-)
G48477 cptp non-coding downstream 6298 9916578 ~ 9918879 (-)
G48479 NA non-coding downstream 31351 9892968 ~ 9893826 (-)
LOC120558310 NA non-coding downstream 158988 9764068 ~ 9766189 (-)
G48436 NA non-coding downstream 162728 9760890 ~ 9762449 (-)
G48430 NA non-coding downstream 359963 9564964 ~ 9565214 (-)
LOC120558372 NA non-coding upstream 81211 10014403 ~ 10018354 (-)
G48522 NA non-coding upstream 89936 10023128 ~ 10023993 (-)
G48569 NA non-coding upstream 366352 10299544 ~ 10299879 (-)
G48617 LOC103365731,LOC108237576,LOC102292634,LOC100710458,LOC104928629,LOC101473555 non-coding upstream 370259 10303451 ~ 10375462 (-)
G48623 NA non-coding upstream 470945 10404137 ~ 10404797 (-)
hipk1a LOC103359735 other downstream 139936 9766311 ~ 9785241 (-)
c1qtnf12 fam132a other downstream 171491 9727874 ~ 9753686 (-)
olfml3a LOC103359736,LOC104967461,LOC102308353,LOC101465779,LOC102785892 other downstream 201043 9689729 ~ 9724134 (-)
plekhg5b plekhg5 other downstream 405722 9427206 ~ 9519455 (-)
LOC120558858 LOC103370645,LOC100704217,LOC102196282,LOC102305949,LOC101463755,LOC102780123 other downstream 516774 9379000 ~ 9408403 (-)
G48523 NA other upstream 91802 10024994 ~ 10025825 (-)
G48697 NA other upstream 708213 10641405 ~ 10733887 (-)
LOC120558961 NA other upstream 1570635 11503827 ~ 11508337 (-)
srxn1 srxn1 other upstream 1952773 11885965 ~ 11891139 (-)
peds1 LOC104919928,LOC103354371 other upstream 2026187 11959379 ~ 11979035 (-)

Expression


Co-expression Network