LOC120559637 (LOC103353002)


Basic Information

Item Value
gene id LOC120559637
gene name LOC103353002
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 24947761 ~ 24958164 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801514.1
gagacagagaggaaatccaggcaggaggaggaagtggacataaagggaggaagggaaagggggcaggaggaaaaagacaaaacaagggGACCCAGATAAAGAGGGAAGATGGCTGAGCCGGAGCTGAAATTACGGAGCAGCCGGGAGAGCGTTGCCAAGGCGGTGAGCCAGGAGAAGATGGGGGAATTACCTGATGATGTGCGTGTCAACATAAACAGAGGAAGAGCTGAAGCAGACCCAGACCAAGATGATCTGATTGTAGAGCACCCAGCGTCTCCGTCTACACCCATGGTCCCTGCTCCTACTGACGCAGGCCCTATCATCGGCTCGCCTGCCAAAGAGAAGATCGTGCTCAAACGCAGCATCACTCTCTTCAATGGTGTGGGAATGATCATAGGCACCATCATTGGCTCTGGCATTTTCGTCACTCCAACAGGTGTGATCAAAGAGACCGGCTCAGCTGGGCTCTCCCTAATCATCTGGTCTGCCTGTGGAGTGATCTCTACCATGGGCGCCCTATGCTATGCTGAGCTGGGCACAACCATCACCAAGTCGGGGGGAGACTACACTTACATCCTGGAGGTGTACGGCGAACTGGCGGCTTTTCTAAAGCTGTGGGTGGAGATGCTCATTATCAGACCGTCATCACAGTATGTGGTGTCGCTGGTGTTTGCTACCTACCTTCTGAAACCTCTCTACCCAAACTGCAGCGTGCCTGACAGTGCAGCCAAGCTCATTGCCTGCTTGTGTCTTACCTCCCTGACGTTTGTAAACTGCATAAGTGTGAGAGCGGCCACCAAGGTGCAGGACTTGTTCACAGCTTCCAAATTGCTAGCCctgatcatcatcatcctctttGGCTTCATCCAGATTTCCACAGgtgatgTGCCGTACCTGAAACCAGACAAGGCGTTCGAAGGCAGCAAACTGGGAGTGGACAATATTGTCTTAGCTCTGTACAGTGGTCTCTTTGCTTTTGGAGGCTGgaattacCTGAATTACGTGACTGAGGAGATGATCAATCCAGAGAGAAACCTGCCCTTGTCCATCATCATATCCATGCCGATAGTGACGGTGGTGTACGTTCTGACCAACCTGGCATACTTCACCACCATCTCTCCTGAAGTCATGGTCGAGTCTGAGGCTGTTGCCGTGAGTTTTGGGGAGTACCATCTTGGTGTGATGTCCTGGCTGATTCCTGTCTTTGTGGGACTGTCCTGCTTCGGAGCCGTCAACGGATCCCTGTTCACCTCAGCACGGTTGTTCTATGCTGGAGCTCGAGAGGGTCAACTCCCTGCTGCTCTGGGTTTGGTCCACACAGACCTCTTCACACCAGTGCCGTCCCTCATCTTCACATGTTTGCTGTCCATGATGTACGCCATCTCCCAGGACATCTTCTCTGTCATCAATCTCTTCAGCTTCTTCACCTGGCTGTGTGTTGGTATGGCCATTGCTGGCATGCTCTGGCTGCGCTTTACCAAGCCCGACCTCAGAAGGCCAATTAAGGTGTATCTGTTCATCCCTGTGACTTTCGTTTTGGGCTGTGTCTTCATGATCGTTGTGTCGTTCTGGGCTGCTCCATTTGAGTGCCTGTTAGGCAGCGGCATTATTCTTACAGGCATCCCAGCGTACCTACTGGGCTACAAGTGGAAAAAACCCCATGTGATCAAGAAGATGCTGGAAATCTTCACCATGTTCTGTCAGAAGATCTTCATGTCTGTTCCTGAGGAGAGGGAGCAGCGCGAGGAGGATGAATAATGCTGGACAGACTGAACAAGATGGACTGTCAATATCTTCGCCTGAACATTCTTAATATGTTTATATTAATTCACTTGTGATTTGGCTAAAGCAGTTTTTTTAAAGGCATATTTTGTGAACActacaaaatgtttaaaaaacttgaaaaatctTCGTCaggtttttgacattttccaaGAATGCTAGAACATGCTTACATGTTGTATGTTAGTTAGTTAATGGAGAGTCATGCTATGATCTTAAAATGTGAGTAATTGTTGCAGACACATAATTAATTGTGTGTGTTAGAAGTTGCATACAATATACTCTGGTGGCCTAAAACATACAAGTTAATTGTTCACCTAAAGTTTACAAATGAGTGGCTTAGTGAGACATTTGATAAAAACTAACAACCAAGCTTCACATATTTTATTATAGTTTACAGTTTTATAGAATATGAAAGCTAATAACCTTTGAGTTAAAACTGAGGACTTTCTGTTACAGTCAATGATGTATGGACTAATTCAAAGTAAAAAGACATAAGGAACATACGTAACTGACAGTGTATAGTGTATAAATAAGATCAGGCTTGGTAGAGGAAATAGTTAACTAGCATTACACTGATTACATTATACACATACGCTACTAATATTTGTGGTAATGACAACTGATttcaatatttgtattttttgtatgcaTTTGTAAAATGAATCCACAACACTATCTGCAAGGACAAGCTAAAGTGAGATAAGACAGTGTATGTAATGTTTCCTGAAGATGTATCATGTTATTCTACCCGTGTCAGAGTCAGTGCTCCACATGTGATGTTATTTGATGAAATGACAGTGAATACCAGCGGTTGTTTGTGAGGCATTATTATAAGAAACTGAAGACCTGCGTAGATGTCCTTCTAGTTGTGTTTAGAAGACTCCATTTTAGCGTTAGTGTTTTTTATTGCTTGTATCATTATTATCTGTGCCAGCCATGTCAGTGCTGATATTCCAGTTTTTCTTTGTTGCATTGGCACTAAAAGACCAAAATGAATGTTGCAAATTTAGTGACATCAGCtttgcttttatattttacctATACAATCTTACTTTTAAAGTGAATATCTGGGGTTTTCCCAAAGTTATTGTAAGCACATTACCAGTCTACTCAAAATAACAGTCGCAGAGGGAAGTGAAGGAGGGTCAGCCTCTACAGTCCAGGTTTTGCAGGACACTGCCGGGTCAACTGGAAATGCATACAGTAAAATTCAATAATAATGCatagacacaaaacaaaaaatagtgCCATTCTTCCAACATAAATGGAGCTGAAGTGTTTTGAATTTCTCACAACGGCAGACAGCAGTACGAGGGAAAGGCTGAAAGAATGGAAATTGGAAAGCATCACAACAAACTGGACAATGATCAACCAAAGTTTAAAAATACCACTATGTAAATAAATCTACATGTAAAAGAAGTGAATACATCTTCAGTATAATTACCACCTGATGGCAACAACGCCCTAACAACTCTAATGAAAATGGAAGTTGATATGAAAGTTTATTACAAACTTTTGAACATAATGCACCTTTTTCACcccaatatttatttttcttcaacaGTCAGATAGCTAGAGACACAACAATGAACAGCACAATGGATGAAGTAATAGCCAAATTATGAATGTgcccttaaagctttagtgctttacacgatgacgatagcgcagcaagcagctttttgtacattcaacatgacggccactacaccgaagcgcagcaaccctgttgatgccgctgtcgctgctacgtcacccggatcgttggtctgattggttggactatCTAATTGCGCCCAGAATCATTTGAGcagcgtccgttggtgacgccccttaggaaatgagctgtgaatgaagcttgccaACCAGGCCATtacaattcctcatgggggcgacataAACTACCCACTATAGCTTCAATAAACCCAATTAAATTATAACAGAGGGTGTCTAAAAAACACATCATATTGTTTACTATGCAGATAAATAATCTCTGCAGATCCCATCATATATTTCATGTTATGCACAACATGCTGTATCTCTGTGTACAAAGTGGTAAGCATTGGTAATTCATCTATGGTGTTTGCTTAATGAAAATGTTATGGAGAACAAACTCTGTTAGCATATTTTTAATCTTAAAAATTGAAAGTACCCATGTCAATTATTGTAACTGTTGTATGTCAGTGACTATGGCGGGTACATGTAACAATAAACtatacaataaaatatttttgttcaaAGTCA
>XM_039801516.1
acagagaggaaatccaggcaggaggaggaagtggacataaagggaggaagggaaagggggcaggaggaaaaagacaaaacaagggGACCCAGATAAAGAGGGAAGATGGCTGAGCCGGAGCTGAAATTACGGAGCAGCCGGGAGAGCGTTGCCAAGGCGGTGAGCCAGGAGAAGATGGGGGCTGAAGCAGACCCAGACCAAGATGATCTGATTGTAGAGCACCCAGCGTCTCCGTCTACACCCATGGTCCCTGCTCCTACTGACGCAGGCCCTATCATCGGCTCGCCTGCCAAAGAGAAGATCGTGCTCAAACGCAGCATCACTCTCTTCAATGGTGTGGGAATGATCATAGGCACCATCATTGGCTCTGGCATTTTCGTCACTCCAACAGGTGTGATCAAAGAGACCGGCTCAGCTGGGCTCTCCCTAATCATCTGGTCTGCCTGTGGAGTGATCTCTACCATGGGCGCCCTATGCTATGCTGAGCTGGGCACAACCATCACCAAGTCGGGGGGAGACTACACTTACATCCTGGAGGTGTACGGCGAACTGGCGGCTTTTCTAAAGCTGTGGGTGGAGATGCTCATTATCAGACCGTCATCACAGTATGTGGTGTCGCTGGTGTTTGCTACCTACCTTCTGAAACCTCTCTACCCAAACTGCAGCGTGCCTGACAGTGCAGCCAAGCTCATTGCCTGCTTGTGTCTTACCTCCCTGACGTTTGTAAACTGCATAAGTGTGAGAGCGGCCACCAAGGTGCAGGACTTGTTCACAGCTTCCAAATTGCTAGCCctgatcatcatcatcctctttGGCTTCATCCAGATTTCCACAGgtgatgTGCCGTACCTGAAACCAGACAAGGCGTTCGAAGGCAGCAAACTGGGAGTGGACAATATTGTCTTAGCTCTGTACAGTGGTCTCTTTGCTTTTGGAGGCTGgaattacCTGAATTACGTGACTGAGGAGATGATCAATCCAGAGAGAAACCTGCCCTTGTCCATCATCATATCCATGCCGATAGTGACGGTGGTGTACGTTCTGACCAACCTGGCATACTTCACCACCATCTCTCCTGAAGTCATGGTCGAGTCTGAGGCTGTTGCCGTGAGTTTTGGGGAGTACCATCTTGGTGTGATGTCCTGGCTGATTCCTGTCTTTGTGGGACTGTCCTGCTTCGGAGCCGTCAACGGATCCCTGTTCACCTCAGCACGGTTGTTCTATGCTGGAGCTCGAGAGGGTCAACTCCCTGCTGCTCTGGGTTTGGTCCACACAGACCTCTTCACACCAGTGCCGTCCCTCATCTTCACATGTTTGCTGTCCATGATGTACGCCATCTCCCAGGACATCTTCTCTGTCATCAATCTCTTCAGCTTCTTCACCTGGCTGTGTGTTGGTATGGCCATTGCTGGCATGCTCTGGCTGCGCTTTACCAAGCCCGACCTCAGAAGGCCAATTAAGGTGTATCTGTTCATCCCTGTGACTTTCGTTTTGGGCTGTGTCTTCATGATCGTTGTGTCGTTCTGGGCTGCTCCATTTGAGTGCCTGTTAGGCAGCGGCATTATTCTTACAGGCATCCCAGCGTACCTACTGGGCTACAAGTGGAAAAAACCCCATGTGATCAAGAAGATGCTGGAAATCTTCACCATGTTCTGTCAGAAGATCTTCATGTCTGTTCCTGAGGAGAGGGAGCAGCGCGAGGAGGATGAATAATGCTGGACAGACTGAACAAGATGGACTGTCAATATCTTCGCCTGAACATTCTTAATATGTTTATATTAATTCACTTGTGATTTGGCTAAAGCAGTTTTTTTAAAGGCATATTTTGTGAACActacaaaatgtttaaaaaacttgaaaaatctTCGTCaggtttttgacattttccaaGAATGCTAGAACATGCTTACATGTTGTATGTTAGTTAGTTAATGGAGAGTCATGCTATGATCTTAAAATGTGAGTAATTGTTGCAGACACATAATTAATTGTGTGTGTTAGAAGTTGCATACAATATACTCTGGTGGCCTAAAACATACAAGTTAATTGTTCACCTAAAGTTTACAAATGAGTGGCTTAGTGAGACATTTGATAAAAACTAACAACCAAGCTTCACATATTTTATTATAGTTTACAGTTTTATAGAATATGAAAGCTAATAACCTTTGAGTTAAAACTGAGGACTTTCTGTTACAGTCAATGATGTATGGACTAATTCAAAGTAAAAAGACATAAGGAACATACGTAACTGACAGTGTATAGTGTATAAATAAGATCAGGCTTGGTAGAGGAAATAGTTAACTAGCATTACACTGATTACATTATACACATACGCTACTAATATTTGTGGTAATGACAACTGATttcaatatttgtattttttgtatgcaTTTGTAAAATGAATCCACAACACTATCTGCAAGGACAAGCTAAAGTGAGATAAGACAGTGTATGTAATGTTTCCTGAAGATGTATCATGTTATTCTACCCGTGTCAGAGTCAGTGCTCCACATGTGATGTTATTTGATGAAATGACAGTGAATACCAGCGGTTGTTTGTGAGGCATTATTATAAGAAACTGAAGACCTGCGTAGATGTCCTTCTAGTTGTGTTTAGAAGACTCCATTTTAGCGTTAGTGTTTTTTATTGCTTGTATCATTATTATCTGTGCCAGCCATGTCAGTGCTGATATTCCAGTTTTTCTTTGTTGCATTGGCACTAAAAGACCAAAATGAATGTTGCAAATTTAGTGACATCAGCtttgcttttatattttacctATACAATCTTACTTTTAAAGTGAATATCTGGGGTTTTCCCAAAGTTATTGTAAGCACATTACCAGTCTACTCAAAATAACAGTCGCAGAGGGAAGTGAAGGAGGGTCAGCCTCTACAGTCCAGGTTTTGCAGGACACTGCCGGGTCAACTGGAAATGCATACAGTAAAATTCAATAATAATGCatagacacaaaacaaaaaatagtgCCATTCTTCCAACATAAATGGAGCTGAAGTGTTTTGAATTTCTCACAACGGCAGACAGCAGTACGAGGGAAAGGCTGAAAGAATGGAAATTGGAAAGCATCACAACAAACTGGACAATGATCAACCAAAGTTTAAAAATACCACTATGTAAATAAATCTACATGTAAAAGAAGTGAATACATCTTCAGTATAATTACCACCTGATGGCAACAACGCCCTAACAACTCTAATGAAAATGGAAGTTGATATGAAAGTTTATTACAAACTTTTGAACATAATGCACCTTTTTCACcccaatatttatttttcttcaacaGTCAGATAGCTAGAGACACAACAATGAACAGCACAATGGATGAAGTAATAGCCAAATTATGAATGTgcccttaaagctttagtgctttacacgatgacgatagcgcagcaagcagctttttgtacattcaacatgacggccactacaccgaagcgcagcaaccctgttgatgccgctgtcgctgctacgtcacccggatcgttggtctgattggttggactatCTAATTGCGCCCAGAATCATTTGAGcagcgtccgttggtgacgccccttaggaaatgagctgtgaatgaagcttgccaACCAGGCCATtacaattcctcatgggggcgacataAACTACCCACTATAGCTTCAATAAACCCAATTAAATTATAACAGAGGGTGTCTAAAAAACACATCATATTGTTTACTATGCAGATAAATAATCTCTGCAGATCCCATCATATATTTCATGTTATGCACAACATGCTGTATCTCTGTGTACAAAGTGGTAAGCATTGGTAATTCATCTATGGTGTTTGCTTAATGAAAATGTTATGGAGAACAAACTCTGTTAGCATATTTTTAATCTTAAAAATTGAAAGTACCCATGTCAATTATTGTAACTGTTGTATGTCAGTGACTATGGCGGGTACATGTAACAATAAACtatacaataaaatatttttgttcaaAGTCA

Function

NR:

description
PREDICTED: large neutral amino acids transporter small subunit 1-like

GO:

id name namespace
GO:0003333 amino acid transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0015171 amino acid transmembrane transporter activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801514.1 True 4029 mRNA 0.43 12 24947761 24958164
XM_039801516.1 False 3984 mRNA 0.43 11 24947761 24958161

Neighbor

gene id symbol gene type direction distance location
wfdc2 LOC104919425,LOC106572146 coding downstream 151653 24794869 ~ 24796108 (-)
fam217ba fam217b,LOC102078452 coding downstream 228087 24715722 ~ 24719674 (-)
edn3b NA coding downstream 249779 24688599 ~ 24697982 (-)
si:dkey-178k16.1 epb41l1,LOC103363988,LOC102294250,LOC102199659 coding downstream 275963 24634771 ~ 24671798 (-)
cntn3a.2 LOC103363983,LOC100703160,LOC104954126,LOC102301181,LOC102197109 coding downstream 520693 24390197 ~ 24427068 (-)
LOC120559745 LOC103353003,LOC104920211,LOC100699381,LOC101479901 coding upstream 11780 24969944 ~ 24990360 (-)
ttc34 ttc34 coding upstream 41714 24999878 ~ 25006135 (-)
si:ch211-112c15.8 NA coding upstream 50114 25008278 ~ 25020847 (-)
ccdc30 LOC103353009 coding upstream 76471 25034635 ~ 25054253 (-)
rimkla rimkla coding upstream 108660 25066824 ~ 25082881 (-)
G52883 NA non-coding downstream 2446 24920716 ~ 24945315 (-)
LOC120559116 LOC103353002,LOC102301713,LOC102203634,LOC101480204,LOC104956590 non-coding downstream 19110 24925757 ~ 24928651 (-)
G52818 NA non-coding downstream 241757 24705517 ~ 24706004 (-)
G52776 chl1,LOC101079354 non-coding downstream 479742 24466034 ~ 24468019 (-)
G52765 NA non-coding downstream 561140 24385903 ~ 24386621 (-)
G52893 NA non-coding upstream 1627 24959791 ~ 24960183 (-)
G52935 alas2,LOC108236847,LOC106524166 non-coding upstream 32819 24990983 ~ 24996820 (-)
G52936 alas2,LOC106524166 non-coding upstream 39954 24998118 ~ 24999647 (-)
LOC120558684 NA non-coding upstream 126643 25084807 ~ 25085797 (-)
G52961 NA non-coding upstream 140941 25099105 ~ 25166197 (-)
phactr3a LOC100701276,LOC107550338,LOC107551495,LOC104947949,LOC103365918,LOC106955159 other downstream 162756 24750431 ~ 24785005 (-)
masp2 masp2,LOC106536928,LOC103357864,LOC107086886 other downstream 608305 24335149 ~ 24339456 (-)
G52501 eno1,LOC104965722,LOC103151087 other downstream 1628077 23308500 ~ 23319684 (-)
si:ch211-150o23.3 LOC103367744,LOC101075068 other downstream 1728861 23214098 ~ 23218900 (-)
G52226 NA other downstream 2417053 22529606 ~ 22530708 (-)
acot7 acot7,LOC102782704 other upstream 952591 25910755 ~ 25972322 (-)
emc1 NA other upstream 1178834 26136998 ~ 26147245 (-)
G53196 NA other upstream 1254829 26212993 ~ 26214882 (-)
LOC120559114 LOC101164642,LOC104966947,LOC100690915,LOC104926428,LOC102195969,LOC101062277 other upstream 1433848 26392012 ~ 26402310 (-)
dcp1a dcp1a other upstream 1688650 26646814 ~ 26658321 (-)

Expression


Co-expression Network