acvrl1 (LOC104932540,LOC104956873,LOC103385089)


Basic Information

Item Value
gene id acvrl1
gene name LOC104932540,LOC104956873,LOC103385089
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 21379367 ~ 21392760 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801579.1
TTGTGAGGTTCTCACAGCGGAAAGAGTCTGGTCTGGTTCCAAACCGACGACGATGTTGTCGGTTTATCAGCGCAGATTTGGACCGAGATGAGATAGCCTACAGCCCGCTGTTTGTCGTCCTGCCAGGACACCgccctttttttatatttcacttCTGCCACATGTAGGCTAGAGTATCACTTGTTGTTAAACGAGTGGGCAGTTTTAATTTTTGTAGCAAAGAGGAAGAACTGCggaccaacttttttttttgtttgtcaccGAAGCAGGAAAGGATGTGAACATCTGCAATTGAGCCGTTTAAACGAAACGTAAAACGATTTACTCCGCTCTTGAAATGGAGCCAGTTGTATTTTAAATCTTCTACTTTTGACTTGAAATACTTTGGGAACACTTCGGCTAACTTTGATATGGGAGACGTGCGGCATCTGCGTCTGTCAAGTTAAAAGGCGAGCAGAAAACAGAGATGGAAAGCTCTTCTCTACTGACAGTGGTGCTAGTTGGGGCGTTTCTGTGGATCTCTGCTATTCATGCAGATTCCAAAGACGATGGGAAGGTGCTGTGTACGTGCGAGAATGGCAAAGGCACATGCGTGAATGGAACTTGCAAAGGAGACATCTGCTTCTACTCCTGGGTTCACGGCCATGAGGAGAGGGGCTGTTTCTCCAAAGTTTACTACATGGAGCAGTGCTTCAGCAAATTTGACCGCTTGTTTATGCACTGCTGCAGAGAGTATCTGTGCAACGCCTTCACCACTCCCCCTCCAAACATTAATGGAGAGCCGACAACAACACCCCCAGAGCTCAGTCGTCCGGAGCTGTGGATCacgttgtctttgctgctgTTAATCACAACTGCCAGCATGTGTGGTCTGGTGCTGTTCCTGCGCTTCCGACGTGCACATGGCAGATTGAGAAATGATGTCCATGGTGACCGTGATGTCACCATGCTCAAGGTTCCTGATGGAGATGACCCCACATACGGCgACATCTTTGATGAGTTTTGTACTTCAGGGAGTGGGACAGGGTTGCCCTATCTGGTCCAAAGGACTATGGCCAGACAAATCTCACTTGTCCAGTGTGTCGGTAAAGGCAGGTATGGGGAGGTGTGGAGGGGAACTTGGATGGGGGAGAGTGTGGCTGTCAAGATCTTTTCCTCTAGGGACGAGCAGTCCTGgttcagagagacagagatctACAATACTGTACAGCTGCGACACGACAACATACTGGGTTTCATAGCCTCCGACATGACATCCAAGAATTCCAGCACCCAGCTGTGGCTCGTCACCCACTTTCATGAGCTGGGTTCGCTCTACGACTTCCTGCAGTACAGCAGCTTGGAGCCTGAGAGCTGCCTCAGGATGTGCCTGTCAGTGGCCTGTGGCCTGGTCCATCTTCACACTGAGATCGTCAGCTCCCAGGAAAAGCCAGCTATCGCCCACCGAGACCTGAAAAGCCGAAACATCCTGGTAAAGCGGAACGGACAGTGCTGCATCGCTGACCTAGGTTTGGCTGTGATACACTCTCAGTCTCATGACTACCTTGATGTGGGCAACAACCCTCGCGTGGGGACCAAGCGCTACATGGCCCCTGAAGTGCTGGATGAGACTATTCGTATGGATGTCTTTGAGTCCTACAAGCAGACTGACATCTGGGCCCTGGGCCTGGTCTTCTGGGAAATTTCCCGCAGGACCATTGTCAATGGGATTGTGGAAGAGTACTGCCCTCCTTTCTTTGACATGGTGCCCTTAGATCCCAGCTTTGAGGAGATGAAGAAGGTGGTGTGCGTGGACCAGCATAAGCCCAGTCTGCACAACAGGCTCCATTCCCACCCTATCCTGTCGGCCATTGCGAAGATCATGAAGGAGTGTTGGTACCAGAGCCCACCAGCCCGCCTTACAGCCCTGCGAGTGAGGAAGACACTCTCCAAACTGGACCATGACAGTGACTTCAGCACTGAGAAACTCAAGAGGGACATCtagaccagagcaacaggatgAAACAAGGACAAACAATTGAAAATGCCAGAAGGGATTATGCACCACATTCCAACAGCACAAGGTGTAAATCATTAGCATATTTTGAGCTAATGGCTCACACAGTCACTGTATTCTATTAAAACCATATGACTTGGGGCAGTAGTGTCTAGACTGgctcccgaggctattttttttttattttatttttttgcgtAGCCTAATTTTCATCTGCCATATTTCTGGTACCCAACCAAAAGGCCCCAAAAAGAAAACTATGAAGATCaaattatatttctttttttttattcatttatttatgttcagctaataaaattaatttccaaagcagaataaataaaaccaaagatTTTATAGCCTGTTCTACACACACAGGGTTTTATTCATAATTGTCTAAATCCCCCCATCGTCATGACAGAAAGGAAAATCTGGCATAGCACAATTACTCATCATCTTAtcgagaagaagaggaggatgtcATTCTGGACTTTCTCTTATATACAGGAAAATTGCACAAATGGGTTTTCCCAACAATTGCCAAAAAAACCTTGGAGgccttggtgtttttttttttactatgaaTACAGGAAATATGTAAGTAATAACATGCTCATACCGAAGCACATTACCTGTTGTGTAAGCATATTTAACTTATATAAAATGAGCCTTCATtatctgcacacagacacattgaGCTATTTAGTTGTACATATTCTAACAGCATTGGAACTGTTGTCATTTATCACCATTGGATttattgtaaatatattttgtatagGGGTATTATTTTCAATTATTCAACAATGAGACACattttatatacttttttttttaacgacacattttttaagtatttttttacatttctgtagGCCAATAATGTACCATCACCATTACTATGGTCAGTAAAGGAATTCACAAACAGACATGTAATATTGtatatgttgaataaaggaTTGTATTTTTGAA

Function

NR:

description
serine/threonine-protein kinase receptor R3-like isoform X1

GO:

id name namespace
GO:0007178 transmembrane receptor protein serine/threonine kinase signaling pathway biological_process
GO:0006468 protein phosphorylation biological_process
GO:0016020 membrane cellular_component
GO:0005524 ATP binding molecular_function
GO:0004675 transmembrane receptor protein serine/threonine kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801579.1 True 2968 mRNA 0.45 10 21379367 21392760

Neighbor

gene id symbol gene type direction distance location
acvr1ba acvr1b,LOC104956875,LOC101062677 coding downstream 3133 21363300 ~ 21376234 (-)
dnajc22 dnajc22 coding downstream 84230 21291261 ~ 21295137 (-)
ikzf4 LOC103356912,LOC106096427,LOC104956881 coding downstream 88221 21281957 ~ 21291146 (-)
wnt10b wnt10b,LOC102780570 coding downstream 101632 21258261 ~ 21277735 (-)
arf3a arf3,ARF3,arf3a,LOC106921537,LOC102781726,LOC106954774,LOC104956878 coding downstream 123903 21250701 ~ 21255464 (-)
ankrd33aa NA coding upstream 3460 21396220 ~ 21403008 (-)
sp5l LOC102777623,LOC102204397,LOC102293226,LOC100709614,LOC104932563,LOC103356902,LOC104956872 coding upstream 81620 21474380 ~ 21477108 (-)
b4galnt1a LOC104956934 coding upstream 187444 21580204 ~ 21606297 (-)
tac3a tac3,LOC103368465 coding upstream 228211 21620971 ~ 21623462 (-)
LOC120559010 NA coding upstream 247578 21640338 ~ 21640949 (-)
G51721 NA non-coding downstream 85522 21291146 ~ 21293845 (-)
LOC120559347 NA non-coding downstream 156735 21219967 ~ 21222632 (-)
G51673 NA non-coding downstream 211619 21166722 ~ 21167748 (-)
G51606 NA non-coding downstream 330581 21046049 ~ 21048786 (-)
G51620 NA non-coding downstream 337423 21037082 ~ 21041944 (-)
G51767 NA non-coding upstream 1682 21394442 ~ 21395700 (-)
G51834 NA non-coding upstream 105384 21498144 ~ 21503262 (-)
LOC120559689 NA non-coding upstream 120243 21513003 ~ 21515984 (-)
LOC120559690 NA non-coding upstream 139640 21532400 ~ 21532964 (-)
G51848 NA non-coding upstream 155753 21548513 ~ 21548738 (-)
esyt1a LOC104932417,LOC104956886,LOC103356920 other downstream 162648 21199340 ~ 21216719 (-)
fmnl3 fmnl3 other downstream 180324 21167904 ~ 21199043 (-)
LOC120558386 hoxc10,LOC100690382 other downstream 426849 20820171 ~ 20952518 (-)
LOC120558911 LOC103362803,LOC100693258 other downstream 1564049 19799205 ~ 19815318 (-)
kcnd3 kcnd3,LOC102776651,LOC102303593,LOC100697611,LOC101470631 other downstream 2301586 18945968 ~ 19077781 (-)
si:dkey-151g10.3 wnk3 other upstream 577292 21970052 ~ 22015043 (-)
LOC120559880 LOC104932903,LOC103358260,LOC104967532,LOC107390844 other upstream 830389 22223149 ~ 22229421 (-)
G52226 NA other upstream 1136846 22529606 ~ 22530708 (-)
si:ch211-150o23.3 LOC103367744,LOC101075068 other upstream 1821338 23214098 ~ 23218900 (-)
G52501 eno1,LOC104965722,LOC103151087 other upstream 1915740 23308500 ~ 23319684 (-)

Expression


Co-expression Network