LOC120559678 (LOC102200381)


Basic Information

Item Value
gene id LOC120559678
gene name LOC102200381
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 13616876 ~ 13633635 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801591.1
TGTTAGCAACTTGTGGCTAGCTCGCTACCAAGGAAGGCAGAGTGCTCCGAGATCTGTTCCTCAGACACCACCCCGAGACTGTCCGCCCGTACGTAATTCGGTCTTTGAAGTCCAGATGCATGAGTCTGGGTCAGAACCAACACACACCATTCCAGCAAGTCAGACAGAGAACGGGAATACTAGTGAGAATGAAAGTCGAGTGAGGAGCAGCCAGACTCCTCCTCTAGAGGCACCCAGGGTTCCAGTGTCATTATCTATGATGACCCCACCAGCAGAAGCCCCACAGCAGTTGCAACAGACACCGCAGCAGCAGGTCCTCAGTCCTCAGCAGCTCCAAGCGCTGCTCCAGCAGCAGAAAGCACTCATGTTACACCAGCAACAAATTCAAGAAGTCTTCAAGAATCAGCAAGAGCAGCTAAATATTCAGCTGCTGCAACAGAAGAATGCTGGGATTGTTAGTCAAGAGCTGACAGCCCAGCAGATTGCCATCCAGCAGCAGCTCCTCCAGGTGCAGCAGCAACATCTCCTCAACCTGCAGAGACAAGGCCTGCTGTCTGTCCTTCCTTCCAGCCCCATTGCACTCACAGTTTCAGGCTGTGAGAATGGTAGCATCCTGTCCGCTGGTGGAGACACCAGAGAGTCTTCAAGTCAACGATCTACCAGCAACGGTCATCACACTCTtctgaagaggaaagaaagTGGGTCACtggatgaaaacacacagaataGCCATGCACTGTATGGAAATGGCATGTGTAAATGGCCTGGCTGTGAGACTGTCTTTGGAGACTTTCAGGCATTTCTCAAacaTTTGAACAACGAGCATACACTGGATGACAAGAGCACAGCACAGTGTCGTGTGCAGATGCAAGTGGTTCAGCAGTTGGAACTGCAGTTGAAAAAGGACAAAGAGCGACTGCAAGCAATGATGGCTCATCTGAAGTCCTCTGAACCCAAACCCGCAGCGCAGCCTgtgaatCTGGTGTCTAATGTATCCTTCTCCCAGGCAACACTGCCCAAAGGCCCTCCTCCTATGAGTTTGTCTCAGAGTGCCACAGCACCATCCACACCCCTGACGCCGCTCTCTGAATCCCCCTCAGTCCTCACTCCCAATAGCATGTTCACTGGAACTCCTGTACGGAGGCGATATAGCCGCTCTGTGAGCCAAGGTAACGATATAGTTGATAATAAGGAGTTCTACTTGAGCACTGAAGTTAGACCTCCATTTACATATGCATCTCTCATAAGACAGgcTATATTTGAATCACCTCGCAATCAGCTGACGTTAAATGAAATCTACAACTGGTTCACAAGAAACTTTGCATATTTCAGGCGCAATGCAGCTACCTGGAAGAATGCCGTCAGACATAATCTCAGCCTCCATAAATGCTTTGTACGTTTGGAAAATGTGAAGGGAGCTGTGTGGACAGTAGATGAGATTGAGTTCCACAGGAGAAGGCCCCAGAAGACTGCTGGTAATGGGTCTCTGCTGAAGAACTCCCAAAACCACCACAGCTCAGCTGGGTCTGCTCATCAGAGCGGCGGTTTCGATGGCAACAGCTCTCTCTACAACCCAGCCTCTATGGGCAGCATCCCATTTCACTCCCTGTCTCATGTTCTCCAAGAGCAGATGAATGGAGTCCTTGCAAATGGATCTGGATACCAAAGTGACAGCAGTGCAACGCAGTCGCCTCCACAAGCTTTCATTAAAGAGGAGCAGGAGGATGAGGAGATATGTGAAGCGTATCCCTATGAATCCCCAGAGAGCACAGACGAGCACGGCCCCAGCCCAGAGATGCACCTCGATGAAGACAACGGCAGCCCGGAGAGGCCCAATCTTCATTTTGATCGCGTACCTTCTCTCTGACTACGAAGTCCAAAATTTCCACTGCAAGGCAGCCTCACTCACAGCCTGTGTGACTTTGTATTCCAAAAGTTTCCAAAAACAACTGCTTCATCTACATAACCTAGCAGTGCAAGCACTCTTTTACGTGGGGAAATTTTGTATCagcatttgttattttttgttcttAATCTAGCTCTCAATTATCTCTGTAGAGTGAgatcacaaaaacacatctgtttatgatttttctcattttatatatgtgtacACATGAAGACCACGATGAGCAGAGAAGCCAAAGGAAAGGGAACATTAATAGTTAGCACTTCACAATGAAAAATGTCCCACCTCTGTATAGCCACTTTATGCCAAGTGGGGGGCCTCACTACCTGATTTTATTTTAGTAGTcataatatataaaacattttgtagaggtaaaaaaaaaaatgttgctttaaaaaatgtaaatgttcacTGCCAACATGATCTGATATATTTGTATCTAAGGTATAATCAATTGATCAAAAGAATACATAGCTTATTTATACTTGTTGGTCTTTTTCACCCCTTCCACAAACATTGCTAAATTTGCTCTAATTGAGCTTGTGAGAGTAGATAATATAGATTTACCATTATTGTAAACCAATGCATCTCTATGAATAATAAATCCCTCATGAAAAATGTG
>XM_039801592.1
TGTTAGCAACTTGTGGCTAGCTCGCTACCAAGGAAGGCAGAGTGCTCCGAGATCTGTTCCTCAGACACCACCCCGAGACTGTCCGCCCGTACGTAATTCGGTCTTTGAAGTCCAGATGCATGAGTCTGGGTCAGAACCAACACACACCATTCCAGCAAGTCAGACAGAGAACGGGAATACTAGTGAGAATGAAAGTCGAGTGAGGAGCAGCCAGACTCCTCCTCTAGAGGCACCCAGGGTTCCAGTGTCATTATCTATGATGACCCCACCAGCAGAAGCCCCACAGCAGTTGCAACAGACACCGCAGCAGCAGGTCCTCAGTCCTCAGCAGCTCCAAGCGCTGCTCCAGCAGCAGAAAGCACTCATGTTACACCAGCAACAAATTCAAGAAGTCTTCAAGAATCAGCAAGAGCAGCTAAATATTCAGCTGCTGCAACAGAAGAATGCTGGGATTGTTAGTCAAGAGCTGACAGCCCAGCAGATTGCCATCCAGCAGCAGCTCCTCCAGGTGCAGCAGCAACATCTCCTCAACCTGCAGAGACAAGGCCTGCTGTCTGTCCTTCCTTCCAGCCCCATTGCACTCACAGTTTCAGGCTGTGAGAATGGTAGCATCCTGTCCGCTGGTGGAGACACCAGAGAGTCTTCAAGTCAACGATCTACCAGCAACGGTCATCACACTCTtctgaagaggaaagaaagTGGGTCACtggatgaaaacacacagaataGCCATGCACTGTATGGAAATGGCATGTGTAAATGGCCTGGCTGTGAGACTGTCTTTGGAGACTTTCAGGCATTTCTCAAacaTTTGAACAACGAGCATACACTGGATGACAAGAGCACAGCACAGTGTCGTGTGCAGATGCAAGTGGTTCAGCAGTTGGAACTGCAGTTGAAAAAGGACAAAGAGCGACTGCAAGCAATGATGGCTCATCTGAAGTCCTCTGAACCCAAACCCGCAGCGCAGCCTgtgaatCTGGTGTCTAATGTATCCTTCTCCCAGGCAACACTGCCCAAAGGCCCTCCTCCTATGAGTTTGTCTCAGAGTGCCACAGCACCATCCACACCCCTGACGCCGCTCTCTGAATCCCCCTCAGTCCTCACTCCCAATAGCATGTTCACTGGAACTCCTGTACGGAGGCGATATAGCCGCTCTGTGAGCCAAGATATAGTTGATAATAAGGAGTTCTACTTGAGCACTGAAGTTAGACCTCCATTTACATATGCATCTCTCATAAGACAGgcTATATTTGAATCACCTCGCAATCAGCTGACGTTAAATGAAATCTACAACTGGTTCACAAGAAACTTTGCATATTTCAGGCGCAATGCAGCTACCTGGAAGAATGCCGTCAGACATAATCTCAGCCTCCATAAATGCTTTGTACGTTTGGAAAATGTGAAGGGAGCTGTGTGGACAGTAGATGAGATTGAGTTCCACAGGAGAAGGCCCCAGAAGACTGCTGGTAATGGGTCTCTGCTGAAGAACTCCCAAAACCACCACAGCTCAGCTGGGTCTGCTCATCAGAGCGGCGGTTTCGATGGCAACAGCTCTCTCTACAACCCAGCCTCTATGGGCAGCATCCCATTTCACTCCCTGTCTCATGTTCTCCAAGAGCAGATGAATGGAGTCCTTGCAAATGGATCTGGATACCAAAGTGACAGCAGTGCAACGCAGTCGCCTCCACAAGCTTTCATTAAAGAGGAGCAGGAGGATGAGGAGATATGTGAAGCGTATCCCTATGAATCCCCAGAGAGCACAGACGAGCACGGCCCCAGCCCAGAGATGCACCTCGATGAAGACAACGGCAGCCCGGAGAGGCCCAATCTTCATTTTGATCGCGTACCTTCTCTCTGACTACGAAGTCCAAAATTTCCACTGCAAGGCAGCCTCACTCACAGCCTGTGTGACTTTGTATTCCAAAAGTTTCCAAAAACAACTGCTTCATCTACATAACCTAGCAGTGCAAGCACTCTTTTACGTGGGGAAATTTTGTATCagcatttgttattttttgttcttAATCTAGCTCTCAATTATCTCTGTAGAGTGAgatcacaaaaacacatctgtttatgatttttctcattttatatatgtgtacACATGAAGACCACGATGAGCAGAGAAGCCAAAGGAAAGGGAACATTAATAGTTAGCACTTCACAATGAAAAATGTCCCACCTCTGTATAGCCACTTTATGCCAAGTGGGGGGCCTCACTACCTGATTTTATTTTAGTAGTcataatatataaaacattttgtagaggtaaaaaaaaaaatgttgctttaaaaaatgtaaatgttcacTGCCAACATGATCTGATATATTTGTATCTAAGGTATAATCAATTGATCAAAAGAATACATAGCTTATTTATACTTGTTGGTCTTTTTCACCCCTTCCACAAACATTGCTAAATTTGCTCTAATTGAGCTTGTGAGAGTAGATAATATAGATTTACCATTATTGTAAACCAATGCATCTCTATGAATAATAAATCCCTCATGAAAAATGTG

Function

NR:

description
PREDICTED: forkhead box protein P1-B-like isoform X3

GO: NA

KEGG:

id description
K09409 FOXP2_4; forkhead box protein P2/4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801591.1 True 2531 mRNA 0.46 16 13616876 13633635
XM_039801592.1 False 2525 mRNA 0.46 16 13616876 13633635

Neighbor

gene id symbol gene type direction distance location
mdfic2 NA coding downstream 830 13609317 ~ 13616046 (-)
LOC120559773 frmd4b,LOC101475124,LOC102291948,LOC102193657,LOC102787077 coding downstream 57199 13535401 ~ 13559677 (-)
lmod3 lmod3 coding downstream 81961 13531879 ~ 13534915 (-)
LOC120559206 LOC103355075,LOC100698283,LOC101476589 coding downstream 89679 13520484 ~ 13527197 (-)
LOC120559852 LOC104955226,LOC102789706,LOC101477062 coding downstream 97317 13510651 ~ 13519559 (-)
LOC120559297 eif4e3,LOC101063498,LOC104943141 coding upstream 3428 13637063 ~ 13642433 (-)
LOC120558698 LOC103355245,LOC104927444,LOC105928575,LOC103467653,LOC107391259,LOC106918288,LOC101471341 coding upstream 91453 13725088 ~ 13739877 (-)
LOC120558999 NA coding upstream 109554 13743189 ~ 13746688 (-)
LOC120558701 LOC106516757,LOC108231961 coding upstream 121294 13754929 ~ 13779091 (-)
LOC120558702 LOC103355290,LOC102793276,LOC102312415,LOC101471251,LOC100701884 coding upstream 216811 13850446 ~ 14082805 (-)
G49514 NA non-coding downstream 183781 13432519 ~ 13433095 (-)
LOC120558464 NA non-coding downstream 238013 13376627 ~ 13378863 (-)
LOC120558462 NA non-coding downstream 248503 13366263 ~ 13368373 (-)
LOC120558463 NA non-coding downstream 259071 13355117 ~ 13357805 (-)
G49447 LOC104955234 non-coding downstream 332626 13281987 ~ 13284250 (-)
G49624 oard1,LOC106909399 non-coding upstream 21896 13655531 ~ 13657376 (-)
G49673 NA non-coding upstream 546705 14180340 ~ 14184391 (-)
G49675 NA non-coding upstream 571954 14205589 ~ 14205824 (-)
G49676 NA non-coding upstream 574937 14208572 ~ 14208852 (-)
G49677 NA non-coding upstream 578575 14212210 ~ 14212497 (-)
LOC120558461 NA other downstream 203698 13406785 ~ 13413178 (-)
LOC120558437 NA other downstream 304147 13308360 ~ 13312729 (-)
LOC120558587 NA other downstream 363268 13250986 ~ 13253608 (-)
camta1a LOC103354943,LOC102299287,LOC102779653,LOC102211199,LOC106922242,LOC104961361,LOC107390471,LOC108232047,LOC103144055 other downstream 395538 12924458 ~ 13221338 (-)
prickle3 prickle3,LOC102790576 other downstream 1176967 12415603 ~ 12439909 (-)
zgc:66479 NA other upstream 113768 13747403 ~ 13753866 (-)
smim29 LOC104942556,LOC104932788,LOC105416285,LOC106572343,LOC105022745 other upstream 406100 14039735 ~ 14125823 (-)
LOC120558710 NA other upstream 506745 14140380 ~ 14145222 (-)
LOC120558545 LOC104942567,LOC103358644 other upstream 782701 14416336 ~ 14432994 (-)
G49766 LOC103358643,LOC101487433,LOC103144045,LOC101072611,LOC101159823,LOC107094832 other upstream 898489 14532124 ~ 14534605 (-)

Expression


Co-expression Network