LOC120559681 (LOC104936655,LOC104942559,LOC101467974,LOC102795863)


Basic Information

Item Value
gene id LOC120559681
gene name LOC104936655,LOC104942559,LOC101467974,LOC102795863
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 14195482 ~ 14203960 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801595.1
CAGGTTGTTGAGTTTGTTATGACAAGTAGAGGCCTCGGACTAAATTAGGAGCGAAGCCCTGTCTCTGTCCGGGCGAATCTGAGATGGAGAGCATGGAactggacctggacctggaccaggAGCTCATGCAGAAATTTAGCTGCATGGGTACAACAGACAAAGATATCCTAATATCGGAATTCCAGAGGCTCCTTGGGTTTCAGCTAAACCCCGCCGGATGCGCCTTCTTTCTGGACATGACCAACTGGAATTTACAAGCAGCCATCGGAGCCTACTATGACTTTGAGAGTCCCAACATCAGTGCACCGTGCATGTCCTTTGTGAGCGATGTGACGATTGGTGAGGGAGAATCAGTTCCACCAGACACTCCTTTCACAAAGACCTGGAGAGTACAGAACACAGGTGCAGAGTCATGGCCTCCTGGGGTTTGTCTGAAGTATGTCGGAGGAGATCAGTTTGGGCATGTAAACATGGTGATGGTGCGGTCTCTAGACCCTCAGGAAATGGCTGATGTTAGTGTGCAGATGCATAGCCCTGCGTCTCCTGGCATGTACCAGGGCCAGTGGAGAATGTGCACAGCCACCGGACTTTACTATGGAGATGTCATTTGGGTGATCCTGAGTGTGGAGGTTGGAGGCCTCCTTGGCGTCACACAGCAGCTTTCCTCTTTTCAAGCGGAGTTCAACACTCAGCCTCACCGCAGCCTGGAAGGAGATTACAACCCCTTCGCCTCGCCAGAAAAGAGCAAGTGCCCCAACAGCAACAATAACAGCCTCCACGATGCCAGCGGTCACAGGGTTGCAGAGGAACATTGGCAGGGAAGCCCTAACCAGCTGCAGCAAGAGCAGAATGGACTTTCACACAACTCTGTGGATATTGTAGCAAACAGTCTACAAAGCAATCTATCAGTAGTCGCTTATAACCAGGTAAGACCCATCAAAGGGCAGGGAAATTCTCCATACTAGTGAATAAATGGTTGGGGTACGTTTCTTCAAATTTCCATCATCAGTGACATAACGATCAAATGACAGAACAACTTCAAAACCTGTAAGCTttccataataaaaaaaaacaggttacATCTAATCTATAAATACAAAGTTAAGTGTAAGATATTTCTCAAGTTCACTGTGTGAGTTGAAAGTAACCCCCAATCATAGGTAGATAAATATCTAATCTAAGTTTCTGTTCAGCTGAAATCATCGTACTATTCAAGTAATTTCAATATACCTTTAGACAGAAAGCATTGCTCAGGGCTGCAGTATTAGATAAACTGGGTTGCTACCATATTAAAATAAAGCTCCAGAGCAGTTCATTACTcccatttaatattttaaagtgcccatattatgaaaaaaacactttttctggg
>XM_039801596.1
CAGGTTGTTGAGTTTGTTATGACAAGTAGAGGCCTCGGACTAAATTAGGAGCGAAGCCCTGTCTCTGTCCGGGCGAATCTGAGATGGAGAGCATGGAactggacctggacctggaccaggAGCTCATGCAGAAATTTAGCTGCATGGGTACAACAGACAAAGATATCCTAATATCGGAATTCCAGAGGCTCCTTGGGTTTCAGCTAAACCCCGCCGGATGCGCCTTCTTTCTGGACATGACCAACTGGAATTTACAAGCAGCCATCGGAGCCTACTATGACTTTGAGAGTCCCAACATCAGTGCACCGTGCATGTCCTTTGTGAGCGATGTGACGATTGGTGAGGGAGAATCAGTTCCACCAGACACTCCTTTCACAAAGACCTGGAGAGTACAGAACACAGGTGCAGAGTCATGGCCTCCTGGGGTTTGTCTGAAGTATGTCGGAGGAGATCAGTTTGGGCATGTAAACATGGTGATGGTGCGGTCTCTAGACCCTCAGGAAATGGCTGATGTTAGTGTGCAGATGCATAGCCCTGCGTCTCCTGGCATGTACCAGGGCCAGTGGAGAATGTGCACAGCCACCGGACTTTACTATGGAGATGTCATTTGGGTGATCCTGAGTGTGGAGGTTGGAGGCCTCCTTGGCGTCACACAGCAGCTTTCCTCTTTTCAAGCGGAGTTCAACACTCAGCCTCACCGCAGCCTGGAAGGAGATTACAACCCCTTCGCCTCGCCAGAAAAGAGCAAGTGCCCCAACAGCAACAATAACAGCCTCCACGATGCCAGCGGTCACAGGGTTGCAGAGGAACATTGGCAGGGAAGCCCTAACCAGCTGCAGCAAGAGCAGAATGGACTTTCACACAACTCTGTGGATATTGTAGCAAACAGTCTACAAAGCAATCTATCAGTAGTCGCTTATAACCAGGGTATACAGGAGCCCTATCCTTTTGGGCAATCTTAAATCATGGGACTTATCACATTGAAGCAGCACCAAACCTCTGGAGTCTGTCACACCAATAAGTAGCTGGTCGAGAGTGTGGAGATTCAAAAACACTTTATGCAAAGTCCAGCTACACTTTGAGAAACCAGAGGCCAACGCTCCCGACGTGCAGCTCAACCAACACCCCACAACCCACTGTATGCACGTGTGAATGCTAAGTTAAAAACGAGTGCTATGAGTCTTTTGAGTGATTTgagtctctcttttttctgatttttttttagttgtcAGAGTGCAAATGAAACAATGATGACAGGAGTGGGTATTTGTGaattgtgtgtacatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcattgtgcaACCTGAAAGAGAGACTTTGGAGGAAAAGCCATTTATTTTGCCAACTGATTCTCCAGTTTCTGCTAAATATGGGCATATCTGAAACAAACTATTGGATATCATTGTTTACTTTTTATCTTCATTTTttaatatacactttttttttaagagaaggGGAACAGCCACATCCTTCAGAAATATATCTGAGGCTGATTCAACATGGCCTGTGCAGTACGGGCAATCGTTTACCTACTATTTTAAATGGGATACAAGTTTGTCCACTGGAGGGAGTCAGCCATTACATTACAAACAAGATAAGAGAAGATAAAATCAACACTGAGAAACAGAACTCTTATTTACAGTATAGCTCCTATGATTTAAGTCTTCATCattgtacagaaacatttttctCTTAAGCTAGACTCTGGAGCCAACTATTTTATTATACGTTCTGTAGTCAAACATGATGaagggttttttttcttcccccacACATTGCTGGTACTTTTGCATATAAACATCTATGAAATATTAAAAGAATATTAGCAGAATATTCATTATTAGTAATAATGCAGTATTACAGATTTCCTATTATCTAAAGCTaagatttagtttagttttacatGCTTGAATTAAaattaaacaacacaacaacatgatGAATGCACACTATGACATAATACATTGAATTCAAGCCATACGAACAGCAGTAAAAACATTATGACacattataaaaaagaaaacataattgTTCTTTGTCACCCATTTTAAAGCTGTCTTGAAGCTGTCTGTTTTATCATATTAAGTTGAATGTATTTGATGAATGTAGAAAAAGATAATGTTTTTGGAAATATATTAATTTACCCAAAGATTCAACGTTGTATATTTGCATCGAACTGGCAGTTTTATGAGTGTAGTTATTGTTCTgaatacaaaaaacaatgtctATTGTTAAAAATGATGCGTATGATGTTCCACATTAGAGTCTACAAAATGTTCTCACTAACCATCGATGAGCTTCTTAAACACATTTGAACATTTGTTTGATCATTGCAGATGCAAACTTACCTGCACCAGTGACATTACCATGAAGTGACAGACTGATGTTGTCTCGCAGAATTGTTACTGCACATTTACTTGCACTAACCAGCTGATCTATGCACTGAGTAATGCAACCTCCATCACAAGGCCCGTGTGTACCTTTCTCCTCCACAAGTACAGTTAAGTCCTGAAGGGTTTGTCAAGTCAATGTGATTTTATCTTATCATCCACAGACAGTGTATAAGACCCCCTTGTCAGGTGAACACCCTTCATTATTGAGGCACTAACTGTGAGCCCCAGGGTTATTGAGCTTTGACAGCATGACAATACCAGCCAATACTTCAACATGTCATGCGGATCTCTGTGCATTAGCTGTGCAAAAATGTTAATCATAAATGTTTCTCCCTGCCGTCAAAGGTATCCGCTGTCAACGCCAATTCATCAAGTGTATTTTGTTATTAGTGTAATATCTCTCTGAGGTTTCCACTGGCCAGATTGCAGAATGAATCAGTTGGCATTAAGACTCTTACAACAGCACATTTATGAGAGCGAGGAAGTGCAAACAGATGAAcgcttttttttcctgtgtgtttgaAGAATGTTTGTATGATTAAATTATCACTGAAAACTGA

Function

NR:

description
PREDICTED: uncharacterized protein C6orf106 homolog isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801595.1 False 1372 mRNA 0.46 4 14199459 14203960
XM_039801596.1 True 2992 mRNA 0.41 5 14195482 14203960

Neighbor

gene id symbol gene type direction distance location
LOC120558709 spdef,LOC103372894 coding downstream 2146 14185309 ~ 14193336 (-)
LOC120558702 LOC103355290,LOC102793276,LOC102312415,LOC101471251,LOC100701884 coding downstream 112677 13850446 ~ 14082805 (-)
LOC120558701 LOC106516757,LOC108231961 coding downstream 416391 13754929 ~ 13779091 (-)
LOC120558999 NA coding downstream 448794 13743189 ~ 13746688 (-)
LOC120558698 LOC103355245,LOC104927444,LOC105928575,LOC103467653,LOC107391259,LOC106918288,LOC101471341 coding downstream 455605 13725088 ~ 13739877 (-)
taf11 taf11 coding upstream 24410 14228370 ~ 14230406 (-)
si:ch73-217n20.1 NA coding upstream 200058 14404018 ~ 14409405 (-)
dlgap4a dlgap4,LOC100704042,LOC103358645,LOC102796366 coding upstream 231285 14435245 ~ 14517114 (-)
col2a1a LOC103358639 coding upstream 361857 14565817 ~ 14590838 (-)
spryd4 spryd4 coding upstream 412651 14616611 ~ 14620139 (-)
G49673 NA non-coding downstream 11091 14180340 ~ 14184391 (-)
G49624 oard1,LOC106909399 non-coding downstream 538106 13655531 ~ 13657376 (-)
G49514 NA non-coding downstream 762387 13432519 ~ 13433095 (-)
LOC120558464 NA non-coding downstream 816619 13376627 ~ 13378863 (-)
LOC120558462 NA non-coding downstream 827109 13366263 ~ 13368373 (-)
G49675 NA non-coding upstream 1629 14205589 ~ 14205824 (-)
G49676 NA non-coding upstream 4612 14208572 ~ 14208852 (-)
G49677 NA non-coding upstream 8250 14212210 ~ 14212497 (-)
G49678 NA non-coding upstream 13060 14217020 ~ 14217510 (-)
G49679 uhrf1bp1 non-coding upstream 13687 14217647 ~ 14218807 (-)
LOC120558710 NA other downstream 50260 14140380 ~ 14145222 (-)
smim29 LOC104942556,LOC104932788,LOC105416285,LOC106572343,LOC105022745 other downstream 69659 14039735 ~ 14125823 (-)
zgc:66479 NA other downstream 441616 13747403 ~ 13753866 (-)
LOC120558461 NA other downstream 782304 13406785 ~ 13413178 (-)
LOC120558437 NA other downstream 882753 13308360 ~ 13312729 (-)
LOC120558545 LOC104942567,LOC103358644 other upstream 212376 14416336 ~ 14432994 (-)
G49766 LOC103358643,LOC101487433,LOC103144045,LOC101072611,LOC101159823,LOC107094832 other upstream 328164 14532124 ~ 14534605 (-)
map3k12 LOC104930685,LOC103358642 other upstream 335828 14539788 ~ 14551558 (-)
G49845 naca,LOC107737655,LOC106571941 other upstream 641378 14845338 ~ 14853817 (-)
G50217 fgd3,LOC104966710 other upstream 2077084 16281044 ~ 16283856 (-)

Expression


Co-expression Network