bin2a (LOC102783891)


Basic Information

Item Value
gene id bin2a
gene name LOC102783891
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 11510733 ~ 11518488 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801861.1
GACTCAGGGCGGTTGGGACATGGGCATGGCGGATCGCTCTACTCTAGTAAGGCGTGTTCAATAAATCTTTTACCCAGGATACTGCAGACAATTGGTTCCAAAGTTCAAGGGTAAAATATCCAGGAGCACAGCGCACGGGGGAGAACCAGAAGAGGGCGAGTCAAAGGAAAGTGTCAACGTGATCCATTTGGGAAAATTATAAAGAAATCAGTCATTGGTGTCGACAGCAATAAACACAGGCAAGACACAATATGGCAGAGAGTACGAGTCCAAAAGGCAACTCTGGTGACTTTGCTAAAAAAGTCCAGAGACAGCTAAGCAGAAGCAAGGAAAAGGTTCTGCAAAGGCTGGGGAAGACAGTGGAGAGCAGAGATGACCAATTTGAACAGTGTCTCCAACAGTTTAATGACCAGCAGACTGATGGGAACCGGATGTACAAGGATCTGAGGAACTACATTAATGCAGTTAGagACATGCGTGAAGCTTCAAGACGCCTTTCCCAGTCTCTGTTTGACGCTTATGAGACCGACTGGGCTGGAGAGGAAGATCTAGGAGCCATCGTAGAGGGGGAAGACCTCCTGTGGAATGACTTTGAGGTGAAGCTATTAGACCAGGCCGTACGCACCATGGAGTCCTACGTGAGCCAATTCCCAGATGTCAGGGAGAAAGTAGCCAAGAGGGGGAGAAAACTGGTGGACTACGACTCTTCCCTCCACCACCTGGAGGCACTGCAGACTGCTAAGAAGAGGGACGATGTCAAGATTAACAAGGCAGAAGAAGAGATGAATGCTGCCAAAAGTGTCTATGAAGGCATCAACACTGAGTTAAAAGAAGAGCTGCCTGTGCTCTTTGATAGCCGCGTTGGATGCTTCGTGACAGTCTTCTCAGCTGTATCAAATTTACGAGACATATTCTATAAGGAAATGAGCACGCTCAACCTCGATCTACATAATGTGATAAAGGAGCTGCAGGCTCAGCATCCGGACAAAATGTTTGCCTTGAAGGGAATGCAACGatATGGCTCCCTGAAGAGACGAAGTCTAATGTCCCCTAAGGCCTGGAAAGCCAGCTTCTCTGAGTTTCACAAGAGCTATAGCCCTAAACCTGCCCAGAGGTTTAGTTTCAAGTCCCCGGACAAGCCTCGCCACAGCACTCTGTCCAGAGAGAGCAGCACCCTCGCAGTCTCCCCGCCATCACCTCTTCTGGAGACCCCCGAGTCCAGGGACCTGGACGCGGGATCCAGCCACAGTGAGACCCACGGTTCTCCTGAACAAGGAGACGCTGCGGCTGGAAACCAGCTGAAGTCGCTGGAAGACAGCAGTCAGGTGGAAGAGGAGAAGGGCCTGAAAGATGAGGAGCCTACGCCTCCTGCAGGATCTGATAATAAGGGAGACGGTGAGAAAGCTCCGCCGAGCGAGAGCAGCTCTGAACTCAACAACTCCTGTGATTCACTGAGCTTGGAGCTCCAGCTGTCTGCAGCAGACGACAGCCCGCTGCACATCGAGGAGAGAGAAGACACTTCTCTAGTGCTCAACACTCCCAGACCAAATGGACTGGAGAACGGAGAGGTTTCTGGGTTAAACTCTGAGACTAAGGACCTGAGCATTCCTCACAAGAATGCTCCTGCAGAAAAACAGGCATCTCCGGATTCAAAAAGCACAGACGTTTAAA

Function

NR:

description
PREDICTED: bridging integrator 2-like

GO:

id name namespace
GO:0005737 cytoplasm cellular_component

KEGG:

id description
K12562 AMPH; amphiphysin

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801861.1 True 1671 mRNA 0.50 12 11510733 11518488

Neighbor

gene id symbol gene type direction distance location
pou6f1 pou6f1,LOC102796073 coding downstream 12669 11487065 ~ 11498064 (-)
tfcp2 tfcp2 coding downstream 32817 11464498 ~ 11477916 (-)
csrnp2 csrnp2,LOC102795091 coding downstream 46607 11455743 ~ 11464126 (-)
itga5 LOC103365860,LOC103385260 coding downstream 89272 11382182 ~ 11421461 (-)
slc48a1a slc48a1,LOC101074998 coding downstream 150538 11348286 ~ 11360195 (-)
racgap1 racgap1 coding upstream 2833 11521321 ~ 11531078 (-)
si:dkey-190g6.2 coq10a,LOC106917050,LOC103139137,LOC102221461 coding upstream 61805 11580293 ~ 11585970 (-)
zgc:56699 NA coding upstream 178468 11696956 ~ 11699952 (-)
cd63 NA coding upstream 198131 11716619 ~ 11731081 (-)
ormdl2 ormdl2,LOC101074775,LOC101464341 coding upstream 227819 11746307 ~ 11750609 (-)
G48891 NA non-coding downstream 72032 11438272 ~ 11438701 (-)
G48761 NA non-coding downstream 289254 11220997 ~ 11221479 (-)
G48756 NA non-coding downstream 302116 11208394 ~ 11208617 (-)
G48749 NA non-coding downstream 361351 11149074 ~ 11149382 (-)
LOC120558410 NA non-coding downstream 645688 10834886 ~ 10865045 (-)
G48903 LOC102783589,LOC107599367 non-coding upstream 45583 11564071 ~ 11572989 (-)
G48886 cs non-coding upstream 58051 11576539 ~ 11578988 (-)
G48907 ankrd52 non-coding upstream 81804 11600292 ~ 11600508 (-)
G48910 ankrd52 non-coding upstream 87245 11605733 ~ 11606614 (-)
G48911 NA non-coding upstream 89482 11607970 ~ 11615709 (-)
LOC120558961 NA other downstream 2396 11503827 ~ 11508337 (-)
G48697 NA other downstream 776846 10641405 ~ 10733887 (-)
G48523 NA other downstream 1484908 10024994 ~ 10025825 (-)
hipk1a LOC103359735 other downstream 1725492 9766311 ~ 9785241 (-)
c1qtnf12 fam132a other downstream 1757047 9727874 ~ 9753686 (-)
srxn1 srxn1 other upstream 367477 11885965 ~ 11891139 (-)
peds1 LOC104919928,LOC103354371 other upstream 440891 11959379 ~ 11979035 (-)
G49083 LOC103354491,LOC102226477,LOC108232148 other upstream 608398 12126886 ~ 12128425 (-)
dnmt3ba NA other upstream 628926 12147414 ~ 12169209 (-)
ppdpfa LOC104933328,LOC101073585 other upstream 702246 12220734 ~ 12223028 (-)

Expression


Co-expression Network