noc2l (noc2l)


Basic Information

Item Value
gene id noc2l
gene name noc2l
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 23558897 ~ 23588252 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039801926.1
AAACTAGTTTACGGTTTAGCACCCGTGAAACGTAAAACCAACCCTTTGGTTTTGCACCAGGGGATTGTGGGTATTGAGGTTTGAGGGCGTCACGTTTTGGATCCAGCATGGCAGCGAAACAGAAAAGGAAATTAGAAGACCTCAGTGTGGATGAGTTCCTGCTGTCAGGTTTTGACTCTGCAGGTGAAGGTGACTCTGATGAAGAGGTTCAAAAACAGAATGGACtccaaaaaaagaacaaaaagaaagaTCTGAAATCTGCAGCCTTTACAATAGATGATGGGAAGAAAGGTAAGGCCACTGAGCACAAGGAGCAGCTGTCCAGGTTAAAGAACAAAGATCCAGAGTTCTACAAGTTTCTGCAAGCAAATGACCAAACGCTCCTAAACTTTGACGACACAGACACCtctgaggatgaggatgagaaAAAGTATCACAGATTGCCATCCGCACTGGAGGAGGCCGGCTCTGGtggcgatgatgatgatgaagatgatgacaTGGGTCAGAAAGCTTCTAAGAAATCCAAGAAGGCAGTGGAGACTATCAAAGTCACAGACAAAATGATTGATGACTGGAAAGCTGCTATGAAGAAAGAACCAACACCTCGTCTCTTCAGAGAAGTCACCCAGGCCTTTAAGGCTGCTGTGGCTACAACCAAGGGCGAAGGAGTGGCTCAGTGTCGATACAAAGTGGCTGACAGTTCAGTGTTCAACGCCTTGGTCCTGTTCTGTATCAGAGATATTTATGTGGCCCTGCAGAGGATGctcaacctgaagccagataaAGACCAGAAAAAGCTAGTGCTCCCATCGTCTAGTCCAAAGTGGCAGAAGAATCAGATCGACGTCAAGATGTATCTCAGTGGAGTAGTTCAGCTGTTATCCTGTCTGACAGAGTCTACAGTCATCAGCGCTGTCCTGCGGCATGCCAACCAGCTCGCACCTTATTACCTTTGTCTACCCAAACAGTGTCGTCACCTGGTTAAGCAACTGATGAAGCAGTGGAGCACAGGGGAGGAGACTAGTCGGGTTCTCGCCTTCCTGGCACTCAACAAAATCTGCAGACACAAGCAGGAAACATATCTTAACCCTATTCTCAAGCAAATGTACATTTCCTACGTACAAAACTGTAAGTTCACATCTCCCAATGTGCTGCCCATGATCAACTTCATGCAGCGAACTCTGACAGAGATGTACTCCCTGGATACACAGGCTACTTACCAGCACGCCTTCATCTACATCCGACAGCTGGCCATCCACCTCAGGAATGCCATGACTATGAAGAAAAAGgAAACGTACCAGTCGGTGTATAACTGGCAGTATATCCACTGTCTGTATCTCTGGTGTCGGGTTCTCAGCTCCCTGCACCCCAGTGATGTACTCCAGCCTCTCATCTATCCACTCTGCCAAGTCATAATTGGCACCATGAAaCTAGTGCCCACATCAAGATACTACCCTCTGAGGATGCACTGTTGCAGAGCCCTCACCCTGCTGTCCAGCAGCACCAACACATTTGCACCGGTGATGCCTTTCCTCTTGGAGATCCTCCAACAGGTGGACTTCAACAAGAAACCAGGGCGAATGAGCAAGAAACCCATCAACTTTGCAGTCATCCTGAAGCTTAGCAAGGTCAACCTAATGGAGAAAGCATACAAGGACGGGTTGATTGACCAGCTGTATGACCTGATACTGGAATACTTTCACACTCAGGCCAGCTCCATCGGCTTCCCGGAGCTTTCCCTGCCCACCGTCATTCAGCTGAAAGCGTTCCTGAAGGAATGCAAAGTGGCCAATTACTGCAAGCCGGTGCGCCAGCTGCTGGAAAAGGTACAGGAGAACAGCAGCCACATCACAGGACGGAGACAGAAGGCTGCCTTCGGAGTGGCCGATGCCACCGCTgtgGCGGCTTGGGAGAAGCAGATGAAGGAGGAGGGGACTCCCCTCAGCAGGTACTACAGCCAGTGGAAAAAGCTGAGGGAAAAGGAGATCCAGCTGGAAATCTCTGGCAAAGACAGGATGGAGGATCTGGAGCTCCCAGAGATCAAACGTAGGAAGATTCAGGAGAAGAAGGTGGAGGACAAGAAGGAGTTCAAGGATTTGTTTGAGTCCGACAGCGAATCAGACGACGGAGAACTCAAAATCAAAGGGAAAAAGGGCCACCTTGGGTCAGATGAtgacaaggaggaggaggaggatgatgatgatgatgatgatgatgatcttaAAGATTTGTCTGACATGAGTGATGATGAGGAGATGGAGTGCGAAGACTCAGATGATGAAGATGGGGATGAAAAGGCCTCCAAGCCTCCTGAGCCGCTGTCCTCCTCTGCCCTGATAAAGCTGGCAGAAGGAGATGAGGATCTGGTGGAGGACCTGGAGCTGTCTGATGATGACTGAGGTTCATGGATGCACACACTCGAGCTTACCTGAGAGACTTTTATGCTCTCCACCTTATTACCCATCTATGTTTAGAATAATATTGGCCTTTTTGCTATTTTCTTTACTTTTGAATGTTGTATTACTTCACCTGTACAGTTCAAACATGTTTATGATGTAATTTTATTAAGCATtgaaattgtaaaaaataaaaaaaataaaaaaaatttaaagag

Function

symbol description
noc2l Predicted to enable histone binding activity and transcription corepressor activity. Predicted to be involved in negative regulation of histone acetylation; negative regulation of transcription by RNA polymerase II; and ribosomal large subunit biogenesis. Predicted to be located in nucleus. Predicted to be part of Noc1p-Noc2p complex and Noc2p-Noc3p complex. Predicted to be active in nucleolus and nucleoplasm. Is expressed in immature eye. Orthologous to human NOC2L (NOC2 like nucleolar associated transcriptional repressor).

NR:

description
nucleolar complex protein 2 homolog isoform X1

GO: NA

KEGG:

id description
K14833 NOC2; nucleolar complex protein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039801926.1 True 2617 mRNA 0.47 18 23558897 23588252

Neighbor

gene id symbol gene type direction distance location
ca6 ca6,LOC102780476 coding downstream 259207 23293203 ~ 23299690 (-)
LOC120559643 NA coding downstream 297512 23259471 ~ 23261385 (-)
spsb1 spsb1 coding downstream 304306 23244807 ~ 23254591 (-)
slc25a33 slc25a33 coding downstream 327102 23222019 ~ 23231795 (-)
atp5pb atp5f1 coding downstream 366020 23187403 ~ 23192877 (-)
perm1 LOC103364029 coding upstream 41189 23629441 ~ 23640398 (-)
her9 hes4,LOC102778090 coding upstream 112324 23700576 ~ 23702429 (-)
lzic lzic coding upstream 303547 23891799 ~ 23894184 (-)
tardbpa tardbp,LOC106534252 coding upstream 419749 24008001 ~ 24021872 (-)
pex14 pex14 coding upstream 677922 24266174 ~ 24319003 (-)
G52544 NA non-coding downstream 110272 23448086 ~ 23448625 (-)
G52477 NA non-coding downstream 321438 23236683 ~ 23237459 (-)
G52474 NA non-coding downstream 344960 23207837 ~ 23213937 (-)
G52471 NA non-coding downstream 353606 23204474 ~ 23205291 (-)
G52453 NA non-coding downstream 363796 23194241 ~ 23195101 (-)
G52574 NA non-coding upstream 114476 23702728 ~ 23702955 (-)
G52630 NA non-coding upstream 201196 23789448 ~ 23791103 (-)
G52633 NA non-coding upstream 220419 23808671 ~ 23809079 (-)
G52634 NA non-coding upstream 225877 23814129 ~ 23814406 (-)
G52635 NA non-coding upstream 249442 23837694 ~ 23837956 (-)
G52501 eno1,LOC104965722,LOC103151087 other downstream 239213 23308500 ~ 23319684 (-)
si:ch211-150o23.3 LOC103367744,LOC101075068 other downstream 339997 23214098 ~ 23218900 (-)
G52226 NA other downstream 1028189 22529606 ~ 22530708 (-)
LOC120559880 LOC104932903,LOC103358260,LOC104967532,LOC107390844 other downstream 1329476 22223149 ~ 22229421 (-)
si:dkey-151g10.3 wnk3 other downstream 1543854 21970052 ~ 22015043 (-)
masp2 masp2,LOC106536928,LOC103357864,LOC107086886 other upstream 746897 24335149 ~ 24339456 (-)
phactr3a LOC100701276,LOC107550338,LOC107551495,LOC104947949,LOC103365918,LOC106955159 other upstream 1162179 24750431 ~ 24785005 (-)
acot7 acot7,LOC102782704 other upstream 2322503 25910755 ~ 25972322 (-)
emc1 NA other upstream 2548746 26136998 ~ 26147245 (-)
G53196 NA other upstream 2624741 26212993 ~ 26214882 (-)

Expression


Co-expression Network