LOC120558423


Basic Information

Item Value
gene id LOC120558423
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 12351427 ~ 12368708 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639120.1
GTAAGATGCAGTAACAAAAACAATTCAGCTAGAGGCTATACATTCACATAGCGAGATGTGCTCAAACTGCTTCAGAGAAACACAGAGGAGGGTGTTGATGTCAAGATGGAACCTGTCAGACGGGACTGTGGATTTCTCAGCCAAGAGAGGAATGGCTTGTCCTCAGTTAAACTCATGGAGGCCAGGTGGAGAGCAGGACACAAGGGAGAGGAGCTTGGCCAGCCACCGACAAGGAGACAGTGAGGAGGcacgaacagacagacagacagacagacagacagagaggagcaATGGAAGGGTCTGATTAAGgtatcctcctcctcttcaatGACACATACTTGCACACATCGAGCCAGCTggccacacactcactctctcataCAGAATATGCACTCATCGTCATTGTGGAGATGCACCGAGCCCCACTGATGTAGAACGAAaagcccacagtgaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639120.1 True 455 lncRNA 0.50 3 12351427 12368708

Neighbor

gene id symbol gene type direction distance location
samd10a LOC105935172,LOC103139076,LOC103354595,LOC107095944 coding downstream 19435 12323485 ~ 12331992 (-)
uckl1a LOC103355333,LOC101079427,LOC103139074,LOC101476695,LOC102196708,LOC102308715,LOC103385400,LOC101173865 coding downstream 28086 12306258 ~ 12323341 (-)
nkain5 LOC103354565,LOC101477820 coding downstream 71390 12271487 ~ 12280037 (-)
ythdf1 LOC104938233,LOC103354577,LOC106952594,LOC100697389,LOC102786472 coding downstream 80896 12259997 ~ 12270531 (-)
dnajc5aa dnajc5,LOC104933326,LOC101169856,LOC107090698 coding downstream 113690 12233105 ~ 12237737 (-)
mfsd2al2 LOC102788240,LOC103355362,LOC102198151 coding upstream 23547 12392255 ~ 12410148 (-)
fam110a NA coding upstream 43513 12412221 ~ 12415372 (-)
plp2 LOC106572444 coding upstream 71309 12440017 ~ 12449668 (-)
sypb syp,LOC104932998 coding upstream 83779 12452487 ~ 12468003 (-)
LOC120559913 cacna1f coding upstream 99992 12468700 ~ 12493767 (-)
G49115 NA non-coding downstream 106594 12243202 ~ 12244833 (-)
G49118 NA non-coding downstream 137886 12211743 ~ 12213541 (-)
G49112 NA non-coding downstream 204394 12146728 ~ 12147033 (-)
G49092 NA non-coding downstream 210013 12140935 ~ 12141414 (-)
G49084 NA non-coding downstream 229877 12119658 ~ 12121550 (-)
G49178 NA non-coding upstream 3113 12371821 ~ 12373308 (-)
G49177 LOC108232018 non-coding upstream 6629 12375337 ~ 12375562 (-)
G49179 NA non-coding upstream 7580 12376288 ~ 12376976 (-)
G49180 NA non-coding upstream 8271 12376979 ~ 12380785 (-)
G49183 snph non-coding upstream 14794 12383502 ~ 12387224 (-)
ppdpfa LOC104933328,LOC101073585 other downstream 128399 12220734 ~ 12223028 (-)
dnmt3ba NA other downstream 182218 12147414 ~ 12169209 (-)
G49083 LOC103354491,LOC102226477,LOC108232148 other downstream 223002 12126886 ~ 12128425 (-)
peds1 LOC104919928,LOC103354371 other downstream 372392 11959379 ~ 11979035 (-)
srxn1 srxn1 other downstream 460288 11885965 ~ 11891139 (-)
fkbp1aa LOC100692950,LOC107391264,LOC103354614,LOC101168621 other upstream 20273 12388981 ~ 12391677 (-)
prickle3 prickle3,LOC102790576 other upstream 46895 12415603 ~ 12439909 (-)
camta1a LOC103354943,LOC102299287,LOC102779653,LOC102211199,LOC106922242,LOC104961361,LOC107390471,LOC108232047,LOC103144055 other upstream 555750 12924458 ~ 13221338 (-)
LOC120558587 NA other upstream 882278 13250986 ~ 13253608 (-)
LOC120558437 NA other upstream 939652 13308360 ~ 13312729 (-)

Expression


Co-expression Network