LOC120558745


Basic Information

Item Value
gene id LOC120558745
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 39656666 ~ 39744170 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639176.1
TTCCTACGGAGCTGCAGGAGACACACTCTGAACTCTGTCTTTACTTCAGCTGCAGTATCTACTCCGTACTCTTTAACCTGAACAAGAACAGGAACCATTACAACCTAAACATGGACAGCAATTTTGGTGTGGTTTGCTGCAAGAAGCCATCTGACAAAGACTGTCagcagaaagcagcagaaagactGTCACAGCACCTGCACCAAAAATAGCCAGCAAATACTACCATGCCTGGCCAAAGATGTCTTGAATATTTTGCACTGTctgcttttcctcttcggtGTTATCTGCCCAGCCGGATACCACCAGGAACACATGGGGTCCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639176.1 True 327 lncRNA 0.47 3 39656666 39744170

Neighbor

gene id symbol gene type direction distance location
bcap31 bcap31,LOC102784580 coding upstream 342937 39282009 ~ 39313729 (+)
slc35a2 NA coding upstream 410630 39207730 ~ 39246036 (+)
pim2 pim2,LOC107397278 coding upstream 456259 39190083 ~ 39200407 (+)
otud5a otud5 coding upstream 470633 39132420 ~ 39186033 (+)
LOC120559063 LOC106516718,LOC103372410 coding upstream 852338 38787321 ~ 38804328 (+)
LOC120558742 NA coding downstream 10369 39754539 ~ 39760147 (+)
LOC120558738 LOC101484296,LOC106675709 coding downstream 64693 39808863 ~ 39811404 (+)
LOC120558740 NA coding downstream 151795 39895965 ~ 39897486 (+)
LOC120558439 LOC102207434,LOC101484296,LOC102207724,LOC106675709 coding downstream 161520 39905690 ~ 39918513 (+)
ptpn18 NA coding downstream 415837 40160007 ~ 40186156 (+)
G56103 NA non-coding upstream 41058 39427826 ~ 39615608 (+)
G56098 NA non-coding upstream 42432 39559928 ~ 39614234 (+)
G56123 NA non-coding upstream 46456 39604313 ~ 39610210 (+)
G56121 NA non-coding upstream 52059 39599880 ~ 39604607 (+)
G56113 NA non-coding upstream 54113 39602161 ~ 39602553 (+)
G56138 NA non-coding downstream 2282 39746452 ~ 39764933 (+)
G56808 NA non-coding downstream 282139 40026309 ~ 40026733 (+)
G56811 NA non-coding downstream 289451 40033621 ~ 40038323 (+)
G56810 gripap1 non-coding downstream 294477 40038647 ~ 40044842 (+)
G56812 NA non-coding downstream 299754 40043924 ~ 40044615 (+)
G56112 NA other upstream 92398 39523146 ~ 39564268 (+)
G56072 NA other upstream 386238 39182501 ~ 39270428 (+)
si:ch211-180f4.1 LOC103365591,LOC102308931 other upstream 500494 39097131 ~ 39156172 (+)
LOC120559065 LOC107695300,LOC103365588,LOC101480057,LOC102306209,LOC102203592,LOC103460216,LOC101079199 other upstream 573170 38972410 ~ 39083496 (+)
G56035 NA other upstream 776284 38879016 ~ 38880382 (+)
G56807 NA other downstream 272815 40016985 ~ 40017315 (+)
G56818 NA other downstream 358215 40102385 ~ 40148620 (+)
G56819 NA other downstream 366288 40110458 ~ 40111288 (+)
G56847 NA other downstream 642158 40386328 ~ 40488120 (+)
LOC120559073 NA other downstream 1355737 41099907 ~ 41103714 (+)

Expression


Co-expression Network