LOC120559128


Basic Information

Item Value
gene id LOC120559128
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 4709392 ~ 4710407 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639215.1
CTCCTAACTACCTGGTGCTCTGTTGACCAATCAGGGCCCCGTATAAAAACTGCTAGTTTCCCCCTTCCGCCCTCTCTTGCCCGCTGGTGACGGAAGTGCGTCATACTTCCGCGTCGCTCACTCCGTGTAGTTGCTCTGCTGTGCTACAGATCTTCGGTTGGCGGGCTATCATTCACCTTACTGTTTGAACGCCGTGAATGAGGAGCGAGTAACACTGATAGCTGCTACGTTTGCATGCTCGGAGCTTCCTCCCTCTGGGCTTACCAAAACTCTGCTTGAGCGGAACTGGGCTGAAGCCACCGGAGGTCCTTGTAGCTGTTTAGCATTTCCACTACTGGCTGCTGTTTTGCTGAGACACTGCTGCTTTTGCCGAAACACTGCTGCTTTTGCCGAGGCTGCTGTTTGCTTCATACGGCTTTTGCCGCGACTGCTGCTGTTATTGAAAATTCAATATCGTAGCGATTGCTGCACGCCATGCTGCACACCTGTCTTGCCTTCTCGGCTACTGGGCCAATATGAGTCACCTGTTTTATTGAGCCATTGTTTTATAGTTGAGGGGTTTGACTCCCTACTTTAATTTGGTTGATTtagttgtttctttgttttctttctattgttttcaatttaattaaaagttgtacttatattttgtttagtttcttTTAGTTAGTCTTTTTCTATTTAAACATTGACTTTTCTTGGTTATGTTATTGTGTCAATTAGAAGTGTTTTGTTTCTTGCTTTGTATGGCTTCCTGGAACCACTAGTGGTTCTGGCCAttatatggtatttatattgTGTTCGATTTCTTtcaatttgtttctttataatCGGTTATTGATTTTTTGAGATTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639215.1 True 854 lncRNA 0.43 3 4709392 4710407

Neighbor

gene id symbol gene type direction distance location
efhd2 efhd2,LOC102781412 coding downstream 3852 4677700 ~ 4705540 (-)
LOC120559100 LOC100709480,LOC103374188,LOC101478014,LOC102305352,LOC102202239,LOC102794305 coding downstream 328331 4283188 ~ 4381061 (-)
asxl1 LOC102292987,LOC107098928 coding downstream 703744 3983273 ~ 4005648 (-)
LOC120558369 NA coding downstream 754622 3952301 ~ 3954770 (-)
si:dkey-16n15.6 LOC103362245 coding downstream 781236 3913993 ~ 3928156 (-)
LOC120558499 LOC105418166,LOC101068103,LOC108412963,LOC106522608,LOC108431938,LOC105419408,LOC106674638,LOC108415465 coding upstream 496815 5207222 ~ 5218713 (-)
LOC120559579 LOC103144399 coding upstream 1027914 5738321 ~ 5741953 (-)
tcea2 LOC103367858,LOC108232081 coding upstream 1695956 6406363 ~ 6427923 (-)
LOC120558793 NA coding upstream 2106300 6816707 ~ 6823536 (-)
LOC120558600 NA coding upstream 2117278 6827685 ~ 6838050 (-)
LOC120559758 NA non-coding downstream 69250 4639093 ~ 4640142 (-)
LOC120559646 NA non-coding downstream 73952 4634314 ~ 4635440 (-)
LOC120558634 NA non-coding downstream 80869 4625963 ~ 4628523 (-)
LOC120558635 NA non-coding downstream 247186 4461787 ~ 4462206 (-)
G47162 samd3,LOC101476819 non-coding downstream 317629 4391269 ~ 4391763 (-)
G47251 NA non-coding upstream 17426 4727833 ~ 4728109 (-)
G47297 NA non-coding upstream 141783 4852190 ~ 4852414 (-)
G47304 NA non-coding upstream 177542 4887949 ~ 4889652 (-)
G47305 NA non-coding upstream 177854 4888261 ~ 4895639 (-)
G47309 NA non-coding upstream 193605 4904012 ~ 4942146 (-)
dedd dedd,LOC103374682 other downstream 87556 4591447 ~ 4621836 (-)
G47059 LOC102202574 other downstream 753010 3955604 ~ 3956382 (-)
G47058 NA other downstream 753863 3955026 ~ 3955529 (-)
LOC120559679 LOC103384848,LOC102790723,LOC100693496 other downstream 759221 3934511 ~ 3950171 (-)
LOC120559401 NA other downstream 1215429 3491004 ~ 3493963 (-)
G47252 NA other upstream 20094 4730501 ~ 4731141 (-)
G47254 NA other upstream 22389 4732796 ~ 4733285 (-)
G47624 NA other upstream 1986038 6696445 ~ 6721729 (-)
G47638 NA other upstream 2093734 6804141 ~ 6805706 (-)
LOC120558602 NA other upstream 2244797 6955204 ~ 7036375 (-)

Expression


Co-expression Network