LOC120559478


Basic Information

Item Value
gene id LOC120559478
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 44024924 ~ 44027156 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639288.1
cttaatctctctttactctcctctctttactctctctttactctctcctctctttactctctcctctctatactctctctcctctctctccttacTCTTGGACCCCGTGTCTGATTGGACCCCGTGTCTGATTGGACCCCGTGTCTGATTGGATCCCGTGTCTGATTGGATCCCGTGTCTGATTGGATCCCGTGTCTGATTGGACCCCGTGTCTGATTGGACCCCGTGTCTGATTGGACCCAGGTCTGATTGGACCCCGTGTCTGATTGGATCCCGTGTCTGATTGGATCCCGTGTCTGATTGGACCCCGTGTCTGATTGGACCCCAGGTCTGATTGGACCCCGTGTCTGATTGGACCCCGTGTCTGATTGGACCCCGTGTCTGATTGGACCCCAGGTCTGATTGGACCCCGTGTCTGATTGGATATCAGTCAGGTTAGGGTTAGTTATCTCGGATATAAAAGCAACTACAGCGTTGAGAGCTTTTGTTTCTTACGTCCTCCCTGGAGCCGTGCGTCTCTACAGCTGGTTCATATTTACAGTTGTTgtatttcttcttctctctttattATTACTCTTTATTATAATCTTATTATTCTGCTAGGACTGTTGTTGACGGCCGTGTTGGTTGATAAGAAGCTGAAGTCACACTAAGTGTAGATGAACACTCCCGCCCTGACCGGCCGACAGAACAGCTGttatttaagagtaaacttcaCGCGTTCTGATTGGTGGACCCAGACTTAGGGCTCAACCCAGAGACAAAAGCTTGTGCAGTTTGTCGCTCGTCGTCTGCTGTGTTGATCAGCGCTGTGGCCACGGAGGCAGCGCTCCTCCAGATGAACCTGAACAGGCAACTAGCAGCAGCTCCAGAGGGAGCCCACACCTGTCTCTGTCCTCGGGGCTCCGTTCCTAAAGTTTGATACCTGAACTCGATACTGCTTCctgaacgatacttttttccaattcaattttataaaaatcaattttaacacaaagaaagtaaaCATTAGACATTGCGGTAGAAGTATCTTCTTTTCCAGCTGCTTAGTTACCTGTGAGAGAAACCTAAAAGtctttcaaacagcccaaatCTCTCTTCAGTTAGTCGCCCACGTAGGAAACTTTTCCTCCACGTAAAACCTGAAAAAGCTCCTACAAGTTTCTGTGAAGGTCTGACTCCTGTCGGCTGTTCCGGGCCTCAGAGGGACGTCAGTGATTTAAAATCTGTCATTTGAAGGAGACTTGTTGCTTCGTCCTCTAACATCGGCCAGCCGTCACCTCGCCTGTTCCTCTCGGGTTCTGCACCCGAcatacagtccctccagaaaaacctgattatgtgatcgcataatcagcctatttttcaaatacgccgcactctcaccgcataaattgccgatttctgcgcaaaatatgcggtgcttgcatgtcATAACCCACGCTTTTTCGTTGTAAAAACGTCtcgtaatatatcttagcagaaagttgaaaaatgttgcgtttacttcacacaagagcagccatttccccgttgccatgggaacgttatgaaatgacgtcattacgcgacatgaacatcattgaaAAGCGTGTTGGGGTTCACCAAACAGCAGTTTCATCGCATAAGACTGCATAAATACCATATGGAGCATATTACATCACATTTTATAAGAAAACGTGTCACATGATCAAGGATTtctgcccgcaacaatcacaaaaaccagcttttttctggaaggactggtatgAATCTATATTTCCGAGCTGTTCCTGAATCAGCATGTTCTGTGGCATGAAATCAGTTCCAAGCCTTCGCCTGACATCATGCACACGAGAAATGGAGCGGCCAGCGGTGTTGATgattcattattaattattcTGACTGTAGTTTGAGGGAGTGACGCTGAACGTTTCCATGACTACTGTTAAAGCTTCACAACAGGAAGTGAATCCTGGGAACTAAAACCTGTTGATGTGCATCTGTGTTctgttattaatattaatatttattactTGTTACTGGCTGAGATTTCTACTGAAGCGTTCTGTAGCTGTTCAGTTTCTTAAAGTTTGATGTTATCACTTTTAATGTAAGCCAGTTTGTAATGGAATAAAGCTCGTTATCCAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639288.1 True 2131 lncRNA 0.45 2 44024924 44027156

Neighbor

gene id symbol gene type direction distance location
LOC120559476 LOC102210967,LOC103358300,LOC108245790,LOC107391506,LOC101163152 coding upstream 974 44019004 ~ 44023950 (+)
LOC120559495 LOC103384526,LOC103358296,LOC101487991,LOC102794006 coding upstream 35721 43974024 ~ 43989203 (+)
LOC120559090 NA coding upstream 52771 43964473 ~ 43972153 (+)
ndnl2 LOC104951562 coding upstream 504087 43482922 ~ 43520837 (+)
LOC120559932 NA coding upstream 506850 43517950 ~ 43518074 (+)
G57893 NA non-coding upstream 2644 44020613 ~ 44022280 (+)
G57892 NA non-coding upstream 4492 44020007 ~ 44020432 (+)
G57867 NA non-coding upstream 54574 43969951 ~ 43970350 (+)
G57878 NA non-coding upstream 62918 43957238 ~ 43962006 (+)
G57860 NA non-coding upstream 151221 43870741 ~ 43873703 (+)
G57897 NA non-coding downstream 16298 44043454 ~ 44044039 (+)
G57906 NA non-coding downstream 24258 44051414 ~ 44055615 (+)
G57907 NA non-coding downstream 26049 44053205 ~ 44054417 (+)
LOC120559493 NA other upstream 40412 43982002 ~ 43984512 (+)
LOC120559089 LOC102209886,LOC102308207,LOC103153489 other upstream 71414 43840847 ~ 43953510 (+)
zgc:113363 LOC103367255 other upstream 638933 43378346 ~ 43385991 (+)
LOC120558567 NA other upstream 1550983 42471896 ~ 42473941 (+)
LOC120558563 NA other upstream 1584025 42440002 ~ 42440899 (+)
LOC120559729 usp11 other downstream 23587 44050743 ~ 44098847 (+)

Expression


Co-expression Network