LOC120559646


Basic Information

Item Value
gene id LOC120559646
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 4634314 ~ 4635440 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639340.1
tttaaatatatctttgtcccagttatattacatataagaGGAGTCACATTGTAAAGTAAATGCCTCTGATGTTACCATGTAAATtgtctgtaacgttagctagccactATTGGTAAAACATGCTAACGTTAATTTTCTGCAAATTGAAGTTGAGCTACGTTTTCCTAATTTAAACGTAGTGTCAGCGAAAAGCAAAACGGCGATTGTCAATGCTTATCATTATTTAACGCTAATTATTAGTGTGGAGAGCCACGATGGCATGTGCACCCACCCAATGACTCAGAATTAACACCTCCACCTGCAGTATCCAGGCATGAAGTTCATCTTCTCTGGCATCACCCAGAGATGCAGGTGGAGGGCTGTTGCCAATCCGGGGAAGATCGACAAGGCTCGCAGGCATTTGGACTTGACTGAACAGTGCTGCACAAGTGCTGTAAGCTTTATATTTTaagctatatttttatattgtggttTGTAATGTCAACCATTTCTACTGTAATTAACAATGTGGCACTAGTGATTCAACTACCTCTTTTTATTATGCAGACTTCACTTGTGACAGTGAAGTTTACCTTTACCTTGACCCACAGCAGTGATTTGTGTGGAATTTACACTGGATTGTAAAAGGTAAActacattatttaattcatcaatt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639340.1 True 655 lncRNA 0.38 3 4634314 4635440

Neighbor

gene id symbol gene type direction distance location
LOC120559100 LOC100709480,LOC103374188,LOC101478014,LOC102305352,LOC102202239,LOC102794305 coding downstream 253253 4283188 ~ 4381061 (-)
asxl1 LOC102292987,LOC107098928 coding downstream 628666 3983273 ~ 4005648 (-)
LOC120558369 NA coding downstream 679544 3952301 ~ 3954770 (-)
si:dkey-16n15.6 LOC103362245 coding downstream 706158 3913993 ~ 3928156 (-)
LOC120559452 suv39h1,LOC102791492 coding downstream 724544 3880310 ~ 3909770 (-)
efhd2 efhd2,LOC102781412 coding upstream 42260 4677700 ~ 4705540 (-)
LOC120558499 LOC105418166,LOC101068103,LOC108412963,LOC106522608,LOC108431938,LOC105419408,LOC106674638,LOC108415465 coding upstream 571782 5207222 ~ 5218713 (-)
LOC120559579 LOC103144399 coding upstream 1102881 5738321 ~ 5741953 (-)
tcea2 LOC103367858,LOC108232081 coding upstream 1770923 6406363 ~ 6427923 (-)
LOC120558793 NA coding upstream 2181267 6816707 ~ 6823536 (-)
LOC120558634 NA non-coding downstream 5791 4625963 ~ 4628523 (-)
LOC120558635 NA non-coding downstream 172108 4461787 ~ 4462206 (-)
G47162 samd3,LOC101476819 non-coding downstream 242551 4391269 ~ 4391763 (-)
G47122 NA non-coding downstream 437265 4196788 ~ 4197049 (-)
G47092 NA non-coding downstream 574601 4050510 ~ 4059713 (-)
LOC120559758 NA non-coding upstream 3653 4639093 ~ 4640142 (-)
LOC120559128 NA non-coding upstream 73952 4709392 ~ 4710407 (-)
G47251 NA non-coding upstream 92393 4727833 ~ 4728109 (-)
G47297 NA non-coding upstream 216750 4852190 ~ 4852414 (-)
G47304 NA non-coding upstream 252509 4887949 ~ 4889652 (-)
dedd dedd,LOC103374682 other downstream 12478 4591447 ~ 4621836 (-)
G47059 LOC102202574 other downstream 677932 3955604 ~ 3956382 (-)
G47058 NA other downstream 678785 3955026 ~ 3955529 (-)
LOC120559679 LOC103384848,LOC102790723,LOC100693496 other downstream 684143 3934511 ~ 3950171 (-)
LOC120559401 NA other downstream 1140351 3491004 ~ 3493963 (-)
G47252 NA other upstream 95061 4730501 ~ 4731141 (-)
G47254 NA other upstream 97356 4732796 ~ 4733285 (-)
G47624 NA other upstream 2061005 6696445 ~ 6721729 (-)
G47638 NA other upstream 2168701 6804141 ~ 6805706 (-)
LOC120558602 NA other upstream 2319764 6955204 ~ 7036375 (-)

Expression


Co-expression Network