LOC120559723


Basic Information

Item Value
gene id LOC120559723
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053116.1
NCBI id CM020913.1
chromosome length 44101041
location 21896328 ~ 21897591 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639357.1
tggttttcagtttcaactttctgtcactgttttggcgtagggaggaggggccTGAGGGGAGGGACAAAGAGGGCGTGGTTTACAtgtaatttgcataggctactgggAGAGAAGGCAGCTCCACAGGCATCCACAGATCCATGTGTTATAACCACATATCTGCAATGGcttccacaagttcacctggaacctccaaatctaGCACCTTCGACTGGGAGGCAGTTTATGGAGAGACTGCTGAGAAGGCTTCAGGAAGTTCTGCAACATCAGCCTGTGGATTTTGActatttacacttttacactgttttACACTGGTTTAAGTCATGAAATGGGACTTGTACCCTTTTGCATAGACCAGTACACATTAACCCTCATATGCATTAtcattgcatttactgtaatttgttATTAAATATAGAGTCAAATTCTTacttgaatatatttatttgttattcatTGAAAAGGTACAGATTTAACTGTTTTGCTGGAGtccatactgtaaatgcatgttATTTCAAAAACTGTTAAGGATTAAAATCAGTACTACATATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639357.1 True 554 lncRNA 0.39 2 21896328 21897591

Neighbor

gene id symbol gene type direction distance location
l1cama l1cam coding downstream 17448 21828929 ~ 21878880 (-)
smc1a smc1a coding downstream 72909 21808296 ~ 21823419 (-)
c1ql4a LOC104932633,LOC102775687,LOC104956857,LOC103385087,LOC103368460 coding downstream 136887 21749085 ~ 21759441 (-)
neurod4 LOC103368461,LOC104956862,LOC101062304 coding downstream 167350 21726090 ~ 21728978 (-)
znf385a znf385a,LOC103368464,LOC102205706,LOC101482250,LOC102294796,LOC108244609 coding downstream 180926 21650403 ~ 21715402 (-)
huwe1 NA coding upstream 566 21898157 ~ 21957314 (-)
phf8 phf8,LOC102799568 coding upstream 60361 21957952 ~ 21969199 (-)
fam3a fam3a,LOC102798212 coding upstream 118743 22016334 ~ 22022646 (-)
ssr4 ssr4 coding upstream 167484 22065075 ~ 22076836 (-)
LOC120558639 NA coding upstream 183928 22081519 ~ 22090163 (-)
G51964 tmem9 non-coding downstream 115264 21779132 ~ 21781064 (-)
G51886 NA non-coding downstream 176205 21719192 ~ 21720123 (-)
G51885 NA non-coding downstream 177195 21717042 ~ 21719133 (-)
G51871 NA non-coding downstream 270449 21619719 ~ 21625879 (-)
G51864 NA non-coding downstream 318077 21577361 ~ 21578251 (-)
G51978 NA non-coding upstream 59870 21957461 ~ 21957711 (-)
G52009 NA non-coding upstream 149177 22046768 ~ 22047729 (-)
G52010 avpr2,LOC107591070,LOC107673055 non-coding upstream 156123 22053714 ~ 22055099 (-)
G52013 NA non-coding upstream 163121 22060712 ~ 22060924 (-)
LOC120559667 NA non-coding upstream 182308 22079899 ~ 22080456 (-)
esyt1a LOC104932417,LOC104956886,LOC103356920 other downstream 679609 21199340 ~ 21216719 (-)
fmnl3 fmnl3 other downstream 697285 21167904 ~ 21199043 (-)
LOC120558386 hoxc10,LOC100690382 other downstream 943810 20820171 ~ 20952518 (-)
LOC120558911 LOC103362803,LOC100693258 other downstream 2081010 19799205 ~ 19815318 (-)
kcnd3 kcnd3,LOC102776651,LOC102303593,LOC100697611,LOC101470631 other downstream 2818547 18945968 ~ 19077781 (-)
si:dkey-151g10.3 wnk3 other upstream 72461 21970052 ~ 22015043 (-)
LOC120559880 LOC104932903,LOC103358260,LOC104967532,LOC107390844 other upstream 325558 22223149 ~ 22229421 (-)
G52226 NA other upstream 632015 22529606 ~ 22530708 (-)
si:ch211-150o23.3 LOC103367744,LOC101075068 other upstream 1316507 23214098 ~ 23218900 (-)
G52501 eno1,LOC104965722,LOC103151087 other upstream 1410909 23308500 ~ 23319684 (-)

Expression


Co-expression Network