G60607


Basic Information

Item Value
gene id G60607
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 10812779 ~ 10852906 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU81296
aaatgacaagttgtccatatcgttctccattggctccaatgATCAAACTCgcggatatttcccagcgaaacactgaacgaaccactttcttaaatcgctgatatgcccacatttttaagtttatccatatacattttataccgatacgttcacaaaggccttgtggtgctcaggatcacgtcatttgactgatagcagttatggtgttgccacagtgaggcgttgtttgagagctcgctctcagtgtctctcaatagctgcagcacagcacagctgacagattcagcaggtgacaggctcgttagcttgattacagacatcaaagcaagtttataaacattcccaggccatggttaccatgacaacactttcacagacacacacccagatactacagacagtaatatgaacagtagtctgtggtcttccacttctctctgactgtcttctctctccccctcgctatctctctgtttctcttttctttctctctctctccccctgtttctctctctgtcctctctccatccctccctctctctctgtctctctctctctccttctttctccatcccgccttctccctccctctctatctctctgtttctcttttctttctctctctctccccctgtttctctctcttttctctctccatccctccttctccctctctctctgtcctctctccatccctccctctctctctctgtctctctctctttctctctctctcctttctccatcccgccttctccctccctctctatctctctgtttctcttttctctctctctgtcctctctccatccctccttctccctccctctctctgttctctctccatccctccttctccctccatctctctctgtctctctctctttttctctctctctccttctctctcatcccgccttctccctccctctctccctgtctctttctctttttctctctctctccttctttcaccatccctcctccctccctctcttactttctttaacttattgaaccaatttccactttttcaactattcttcagcttcagc
>TU81298
aaatgacaagttgtccatatcgttctccattggctccaatgATCAAACTCgcggatatttcccagcgaaacactgaacgaaccactttcttaaatcgctgatatgcccacatttttaagtttatccatatacattttataccgatacgttcacaaaggccttgtggtgctcaggatcacgtcatttgactgatagcagttatggtgttgccacagtgaggcgttgtttgagagctcgctctcagtgtctctcaatagctgcagcacagcacagctgacagattcagcaggtgacaggctcgttagcttgattacagacatcaaagcaagtttataaacattcccaggccatggttaccatgacaacactttcacagacacacacccagatactacagacagtaatatgaacagtagtctgtggtcttccacttctctctgactgtcttctctctccccctcgctatctctctgtttctcttttctttctctctctctccccctgtttctctctctgtcctctctccatccctccctctctctctgtctctctctctctctttttctctctctctccttctttctccatcccgccttctccctccctctctatctctctgtttgtcttttctttctctctctctccctgtttctctctcttttctctctctctgtcctctctccatccctccatctctctctgtctctctctctctttttctctctctctccttctctctcatcccgccttctccctccctctctccctgtctctttctcttttctttctctctctctccccctgtttctctctcttttctctctccatccctccttctccctctctctctgtcctctctccatccctccctctctctctctgtctctctctctttctctctctctcctttctccatctctctgtttctcttttctttctctctctctccccctgtttctctctcttttctctctccatccctccttctccctctctctctgtcctctctccatccctccctctctctctctgtctctctcttttctctctctcctttctccatcccgccttctccctccctctctatctctctgtttctcttttctttctctctctctccctgtttctttctcttttctctctctctgtcctctctccatccctccttctccctccctctctctgttctctctccatccctccttctccctccatctctctttttctctctctctccttctctctcatcccaccttctccctccctctctccctgtctctttctctttttctctctctcttcttctttctccatccctcctccctccctctcttactttctttaacttattgaaccaatttccactttttcaactattcttcagcttcagctaaagacttcacaatgttctacatattttgtcatttttcagcttttaaagccaacaatttagcgtcaactttgaactttttaacgatttccactttttcaactattctctctACTTCaattcttcttacagatttcagctattcaaccagttagctttagcagttcagctattcagcattcccacgcattttccgcaggaaatgcattttctagttgggggaatg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU81296 False 1055 lncRNA 0.47 2 10812779 10814069
TU81298 True 1616 lncRNA 0.46 3 10812779 10852906

Neighbor

gene id symbol gene type direction distance location
LOC120560494 NA coding upstream 1437033 9368199 ~ 9375746 (+)
tcima LOC104938922,LOC102777577,LOC103152810,LOC103353800,LOC101487124,LOC102217691 coding upstream 1678199 9133547 ~ 9134580 (+)
LOC120560490 abcb9 coding upstream 1823416 8972286 ~ 8989363 (+)
LOC120560802 abcb9,LOC106965289 coding upstream 1847673 8939829 ~ 8965106 (+)
zgc:113436 LOC102776507 coding upstream 1879526 8922283 ~ 8933253 (+)
marveld2b LOC104926564,LOC103371582,LOC102788930,LOC102293847,LOC101466532 coding downstream 320113 11173019 ~ 11188211 (+)
oclnb LOC104926565,LOC103397562 coding downstream 340581 11193487 ~ 11206112 (+)
gtf2h2 LOC100696048,LOC102788170,LOC101466805,LOC102292669,LOC102204724 coding downstream 366045 11218951 ~ 11231887 (+)
ankrd34bb NA coding downstream 422112 11275018 ~ 11277484 (+)
LOC120561249 fut7,LOC103353858 coding downstream 721074 11573980 ~ 11576354 (+)
G60577 NA non-coding upstream 41955 10770546 ~ 10770824 (+)
G60575 NA non-coding upstream 69893 10742652 ~ 10742886 (+)
G60574 NA non-coding upstream 76599 10735721 ~ 10736180 (+)
G60566 NA non-coding upstream 108086 10686683 ~ 10704693 (+)
G60620 NA non-coding downstream 49155 10902061 ~ 10905629 (+)
G60682 NA non-coding downstream 266871 11119777 ~ 11120044 (+)
G60698 NA non-coding downstream 305028 11157934 ~ 11158234 (+)
G60722 NA non-coding downstream 357759 11210665 ~ 11223962 (+)
G60723 NA non-coding downstream 358682 11211588 ~ 11214100 (+)
LOC120561144 NA other upstream 60339 10748116 ~ 10752440 (+)
LOC120561142 NA other upstream 65826 10726438 ~ 10746953 (+)
LOC120560959 golga7,LOC104937560,LOC106585131 other upstream 831725 9926950 ~ 9981054 (+)
ppp3cca LOC104934810,LOC100705072,LOC105915415,LOC101486266,LOC102777092,LOC103366803,LOC102200614,LOC101072650,LOC106932221 other upstream 1757014 9017891 ~ 9055765 (+)
vps37ba vps37b,vps37c,LOC102776795 other upstream 1797876 8991441 ~ 9014903 (+)
G60897 NA other downstream 1073277 11926183 ~ 11926601 (+)
G61139 tubb2b,tubb4b,LOC103024866,LOC101061694,LOC105901187 other downstream 2068241 12921147 ~ 12923836 (+)
LOC120560904 crb2,LOC103353841,LOC106959700,LOC106929552 other downstream 2279192 13132098 ~ 13180491 (+)
G61337 LOC100705941,LOC102292089,LOC108234925,LOC106529513,LOC104934772,LOC103365846 other downstream 3254577 14107483 ~ 14109546 (+)
G61338 htr7,LOC104934772,LOC101065316 other downstream 3288536 14141442 ~ 14142050 (+)

Expression


Co-expression Network