G61389 (crybb3,LOC103469711)


Basic Information

Item Value
gene id G61389
gene name crybb3,LOC103469711
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 14325390 ~ 14327533 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU82225
AGGGCAGGCACTGTCGGCAGTGTGGGGTGAGGCTGTGGGAGGGAGGGGGCGGGAGGTGTGTGAGGATCCTGCTCAGCTGGCTCCAGCTGTGGCAGGAGGGGCAGGAGGTGCTGGGGCGGGGTCGGGGTCGGGTCCTGGGCCGGGAACCGGAGCTGGGTCGGGGACAGTGAAACAGCCCCTCTTGTGCCACTGCATGTCCCGCACACGTCGGACAGACTGGATCTGAGGTGCAGGGGCCTCCCAGTCGTTCCAGTGCTTGAAATCTCCTCTCTCGAAGATAAACTGGCGCCCCCTGTAGCCTGGATACATGTAGCCGACCCATGTTCCGTTAAGAGCCTTGACACTCGCCACACGATCCTGAAAACCGTGGCCCCACAAACTGGgcacatcatcatcaacaatcTCCATCTTCCTTCCAGTAAATCCAGGGTTCTCGTACAGATGTAGCTTGTGTTCGGCACTGTCCACTTTGAGTGGCCTTAGAGACAAGAGGGAGTAGCTGTTCTGACTGTTGGTCCAGGTGTCCCAGCGTGGATATTCGCCCTTCTCCAGAATAAACTGCTCCCCTGTGAAGCCATGCCGATCATAACCCGCCCAGGGTCCTGACTCAACTATGACAGATCCAACCTTCTCCAGTCCCTTCTCTGTCACATCTTTACAATCTGATGAAAACTCCGCCTTGCAGCCCTGGAAGTTCTCAAACTCAAACAGCAACACCTTATATGTGGCTCCAGCTCCACCCTGGCTCTTCCCTGCAGCCAGCTGCTCCGGGGCACTCTGCTGCTCCGACATCCTCCTGATCCACTGCTCCTCCACTGGGTTATGGCCTGCTAGGATGTGGTAGTGTCCCTCTTTTTCTGTGCCACTTGGTGTTTGGTGGGGTTGAGCCATTAGAGGGCAGGGACAGGGGGGGTATTTATG

Function

symbol description
crybb3 Predicted to be a structural constituent of eye lens. Predicted to be involved in lens development in camera-type eye and visual perception. Is expressed in eye and lens. Human ortholog(s) of this gene implicated in cataract 22 multiple types. Orthologous to human CRYBB3 (crystallin beta B3).

NR:

description
PREDICTED: beta-crystallin B3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82225 True 921 lncRNA 0.57 6 14325390 14327533

Neighbor

gene id symbol gene type direction distance location
idua idua coding upstream 79085 14234278 ~ 14246305 (+)
LOC120560659 LOC103369208,LOC102291259,LOC102215744,LOC101478239 coding upstream 92002 14212239 ~ 14233388 (+)
LOC120560074 NA coding upstream 113686 14198755 ~ 14211704 (+)
piwil2 piwil2 coding upstream 136473 14147570 ~ 14188917 (+)
atad1a atad1,LOC101479261,LOC100705680,LOC104934768,LOC102292399,LOC106527948 coding upstream 325119 13986231 ~ 14000271 (+)
unc119.1 unc119b coding downstream 49721 14377254 ~ 14383227 (+)
msi1b msi1,LOC100704609 coding downstream 77607 14405140 ~ 14429432 (+)
prkab1b LOC103353610,LOC101165238 coding downstream 110292 14437825 ~ 14445152 (+)
pla2g1b NA coding downstream 123318 14450851 ~ 14454246 (+)
cfap77 NA coding downstream 221146 14548679 ~ 14555480 (+)
G61376 NA non-coding upstream 62521 14262155 ~ 14262869 (+)
G61332 NA non-coding upstream 264219 14060922 ~ 14061171 (+)
LOC120561318 NA non-coding upstream 420050 13904693 ~ 13905340 (+)
LOC120561317 NA non-coding upstream 420732 13903363 ~ 13904658 (+)
LOC120561319 NA non-coding upstream 500156 13812112 ~ 13825234 (+)
G61391 NA non-coding downstream 647 14328180 ~ 14329747 (+)
G61431 rnf10,LOC102784202 non-coding downstream 37699 14365232 ~ 14368488 (+)
G61448 NA non-coding downstream 73698 14401231 ~ 14401881 (+)
G61449 NA non-coding downstream 74522 14402055 ~ 14402762 (+)
G61450 NA non-coding downstream 76100 14403633 ~ 14404172 (+)
G61390 crybb2,LOC108234953,LOC100703162 other upstream 5884 14317539 ~ 14319506 (+)
G61383 NA other upstream 41519 14283417 ~ 14283871 (+)
LOC120560400 tmem150a,LOC106585116 other upstream 43619 14252256 ~ 14281771 (+)
G61338 htr7,LOC104934772,LOC101065316 other upstream 183340 14141442 ~ 14142050 (+)
G61337 LOC100705941,LOC102292089,LOC108234925,LOC106529513,LOC104934772,LOC103365846 other upstream 215844 14107483 ~ 14109546 (+)
c6h12orf43 NA other downstream 61938 14389471 ~ 14392583 (+)
LOC120560925 NA other downstream 103797 14431330 ~ 14434597 (+)
G61514 surf4,LOC103397973,LOC102307728,LOC100699423,LOC101479701,LOC101465012 other downstream 371992 14699525 ~ 14794602 (+)
LOC120561401 NA other downstream 427917 14755450 ~ 14762549 (+)
surf4l surf4,LOC103397973,LOC102307728,LOC100699423,LOC101479701,LOC101465012 other downstream 446980 14774513 ~ 14795943 (+)

Expression


Co-expression Network