c6h12orf43


Basic Information

Item Value
gene id c6h12orf43
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 14389471 ~ 14392583 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU82315
CATGCATTAATCATGGCGGCCGCCGCTAAAAACATGGTTGCTGTTGACGATTCCAGCAGTAGTGACGATGAAGCGCTTAAAAGATGTCAGGAGGCAGTTTGGGACATACGAAGTGACAAGAACAAAGATGAGGACAGCAATGTGCAACAGTCAAAGCGtgttgttgtcgcTGACCATGACCACGATGGCAACGAGCTTCAGGTCACCAAAGGGTTTCAAATACACGTTGCTAAGAAGTTGGGACATCTGCTTGACAGGTAAGTATTGACTTTGTAGGGAAGTTTGGCATTTGAATACAATAATCTCATAATTCATGCACATATATTTACACCTGACTTCTGATGTGCCTGTTACTGCCAGTTCcattacagagatggagactgAAACTTTATCCTGTGTGAAATCAGCTAAATGTGGtggtgatgataatgatgatgatgatgatgatgaaggtgaagtttctcttttttttttcttagctcttttttttttgtacttgctGCTTTTCTGGGAATTCTGCTATTATGTCTTTCAATGCACACCTATCCACatatttttgttccttttttttgtagGATTCCGTCTGTTTTCTACGTCAGTCCCGGGACAGAAAGCTGATGATCCTCCGGCCCCTGTGAGGCGTCGGCCCGTACCCAGCTCAAGGTTCTTATTGTTGAGTTTTTAAAGAACTCTGATTCGTTTGTGTAGTCCTTAACATTCTACATCCCTCTGTTGGCCACAGTGACAGCGACAGTGAGATGGAAACACGGCTGAGGGAGGCAGCGGTGTCTGTCAAAGATCTCTTACACACATCGTCACTGCCCTCTACTCTCTCCACTCCCTCGACAGAGCTTCCCTGCtctgaaaaagtaaagaaaaagacgAAAGcggcagagggagaggagaaccatgttaagaagaaaaaaaagaggaaaccgaCTCATGAAGAGAGTGAGCAGGTGGACTCTGCAGGTTCTCCTCTTAATGCTCAAAGAAATGGTGAGCCCAGGACCTCAGAGCAGGAACACACGCAGGTCAAAGTGAaacggaaaaagaaaaagaagcgaGAATTACACCCAGAGGAAGAAGCTTTGAACTGAATTTCCTCTTGACTAATCTTTCACTGTTTCGGGGATGTTTGTTTGTTATCCAGTCTGCCATAGTTCGTTACAAGCTTGTAATATATTTCCCGAAAACGTTTTGAGTATATTTTTAGGAAGCCACATGTTTCAGAGCATGCGGCAAATACACAACAGTAAATGCATCTAAAATGTGTAaacaaaacccccccccccctttttttttcattaaaaatctTTTCA
>XM_039802551.1
TGTATGAAGACAGTGATGGATAAAGGCACATATCAAATTGAAAAAGCCCAATTTCTGGTCCACACAGTTCAAATTTACGAACAGACTGCATTACCCAGAATCCTCAGCTCAAAACAGACATCACCAGCGGCACATGCATTAATCATGGCGGCCGCCGCTAAAAACATGGTTGCTGTTGACGATTCCAGCAGTAGTGACGATGAAGCGCTTAAAAGATGTCAGGAGGCAGTTTGGGACATACGAAGTGACAAGAACAAAGATGAGGACAGCAATGTGCAACAGTCAAAGCGtgttgttgtcgcTGACCATGACCACGATGGCAACGAGCTTCAGGTCACCAAAGGGTTTCAAATACACGTTGCTAAGAAGTTGGGACATCTGCTTGACAGTTCcattacagagatggagactgAAACTTTATCCTGTGTGAAATCAGCTAAATGTGGtggtgatgataatgatgatgatgatgatgatgaagGATTCCGTCTGTTTTCTACGTCAGTCCCGGGACAGAAAGCTGATGATCCTCCGGCCCCTGTGAGGCGTCGGCCCGTACCCAGCTCAAGTGACAGCGACAGTGAGATGGAAACACGGCTGAGGGAGGCAGCGGTGTCTGTCAAAGATCTCTTACACACATCGTCACTGCCCTCTACTCTCTCCACTCCCTCGACAGAGCTTCCCTGCtctgaaaaagtaaagaaaaagacgAAAGcggcagagggagaggagaaccatgttaagaagaaaaaaaagaggaaaccgaCTCATGAAGAGAGTGAGCAGGTGGACTCTGCAGGTTCTCCTCTTAATGCTCAAAGAAATGGTGAGCCCAGGACCTCAGAGCAGGAACACACGCAGGTCAAAGTGAaacggaaaaagaaaaagaagcgaGAATTACACCCAGAGGAAGAAGCTTTGAACTGAATTTCCTCTTGACTAATCTTTCACTGTTTCGGGGATGTTTGTTTGTTATCCAGTCTGCCATAGTTCGTTACAAGCTTGTAATATATTTCCCGAAAACGTTTTGAGTATATTTTTAGGAAGCCACATGTTTCAGAGCATGCGGCAAATACACAACAGTAAATGCATCTAAAATGTGTAaacaaaacccccccccccctttttttttcattaaaaatctTTTCATATCA
>XM_039802552.1
CCCAGAATCCTCAGCTCAAAACAGACATCACCAGCGGCACATGCATTAATCATGGCGGCCGCCGCTAAAAACATGGTTGCTGTTGACGATTCCAGCAGTAGTGACGATGAAGCGCTTAAAAGATGTCAGGAGGCAGTTTGGGACATACGAAGTGACAAGAACAAAGATGAGGACAGCAATGTGCAACAGTCAAAGCGtgttgttgtcgcTGACCATGACCACGATGGCAACGAGCTTCAGGTCACCAAAGGGTTTCAAATACACGTTGCTAAGAAGTTGGGACATCTGCTTGACAGTTCcattacagagatggagactgAAACTTTATCCTGTGTGAAATCAGCTAAATGTGGtggtgatgataatgatgatgatgatgaagGATTCCGTCTGTTTTCTACGTCAGTCCCGGGACAGAAAGCTGATGATCCTCCGGCCCCTGTGAGGCGTCGGCCCGTACCCAGCTCAAGTGACAGCGACAGTGAGATGGAAACACGGCTGAGGGAGGCAGCGGTGTCTGTCAAAGATCTCTTACACACATCGTCACTGCCCTCTACTCTCTCCACTCCCTCGACAGAGCTTCCCTGCtctgaaaaagtaaagaaaaagacgAAAGcggcagagggagaggagaaccatgttaagaagaaaaaaaagaggaaaccgaCTCATGAAGAGAGTGAGCAGGTGGACTCTGCAGGTTCTCCTCTTAATGCTCAAAGAAATGGTGAGCCCAGGACCTCAGAGCAGGAACACACGCAGGTCAAAGTGAaacggaaaaagaaaaagaagcgaGAATTACACCCAGAGGAAGAAGCTTTGAACTGAATTTCCTCTTGACTAATCTTTCACTGTTTCGGGGATGTTTGTTTGTTATCCAGTCTGCCATAGTTCGTTACAAGCTTGTAATATATTTCCCGAAAACGTTTTGAGTATATTTTTAGGAAGCCACATGTTTCAGAGCATGCGGCAAATACACAACAGTAAATGCATCTAAAATGTGTAaacaaaacccccccccccctttttttttcattaaaaatctTTTCATATCA

Function

GO:

id name namespace
GO:0048878 chemical homeostasis biological_process

KEGG:

id description
ko04712 Circadian rhythm - plant

RNA

RNA id representative length rna type GC content exon number start site end site
TU82315 True 1322 TUCP 0.43 3 14389603 14392578
XM_039802551.1 False 1154 mRNA 0.45 6 14389471 14392583
XM_039802552.1 False 1055 mRNA 0.46 6 14389564 14392583

Neighbor

gene id symbol gene type direction distance location
unc119.1 unc119b coding upstream 6244 14377254 ~ 14383227 (+)
idua idua coding upstream 143166 14234278 ~ 14246305 (+)
LOC120560659 LOC103369208,LOC102291259,LOC102215744,LOC101478239 coding upstream 156083 14212239 ~ 14233388 (+)
LOC120560074 NA coding upstream 177767 14198755 ~ 14211704 (+)
piwil2 piwil2 coding upstream 200554 14147570 ~ 14188917 (+)
msi1b msi1,LOC100704609 coding downstream 12557 14405140 ~ 14429432 (+)
prkab1b LOC103353610,LOC101165238 coding downstream 45242 14437825 ~ 14445152 (+)
pla2g1b NA coding downstream 58268 14450851 ~ 14454246 (+)
cfap77 NA coding downstream 156096 14548679 ~ 14555480 (+)
barhl1a NA coding downstream 163806 14556389 ~ 14563699 (+)
G61431 rnf10,LOC102784202 non-coding upstream 20983 14365232 ~ 14368488 (+)
G61391 NA non-coding upstream 59724 14328180 ~ 14329747 (+)
G61389 crybb3,LOC103469711 non-coding upstream 61938 14325390 ~ 14327533 (+)
G61376 NA non-coding upstream 126602 14262155 ~ 14262869 (+)
G61332 NA non-coding upstream 328300 14060922 ~ 14061171 (+)
G61448 NA non-coding downstream 8648 14401231 ~ 14401881 (+)
G61449 NA non-coding downstream 9472 14402055 ~ 14402762 (+)
G61450 NA non-coding downstream 11050 14403633 ~ 14404172 (+)
LOC120561034 NA non-coding downstream 72420 14465003 ~ 14465725 (+)
LOC120561032 NA non-coding downstream 76614 14469197 ~ 14472189 (+)
G61390 crybb2,LOC108234953,LOC100703162 other upstream 69965 14317539 ~ 14319506 (+)
G61383 NA other upstream 105600 14283417 ~ 14283871 (+)
LOC120560400 tmem150a,LOC106585116 other upstream 107700 14252256 ~ 14281771 (+)
G61338 htr7,LOC104934772,LOC101065316 other upstream 247421 14141442 ~ 14142050 (+)
G61337 LOC100705941,LOC102292089,LOC108234925,LOC106529513,LOC104934772,LOC103365846 other upstream 279925 14107483 ~ 14109546 (+)
LOC120560925 NA other downstream 38747 14431330 ~ 14434597 (+)
G61514 surf4,LOC103397973,LOC102307728,LOC100699423,LOC101479701,LOC101465012 other downstream 306942 14699525 ~ 14794602 (+)
LOC120561401 NA other downstream 362867 14755450 ~ 14762549 (+)
surf4l surf4,LOC103397973,LOC102307728,LOC100699423,LOC101479701,LOC101465012 other downstream 381930 14774513 ~ 14795943 (+)
cntrl NA other downstream 535790 14928373 ~ 14979797 (+)

Expression


Co-expression Network