LOC120560526


Basic Information

Item Value
gene id LOC120560526
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 15518780 ~ 15532796 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU82867
TGTGTGTTTTAATATAATATCTTAAAATATTTAGAGTGCTTGATGCAACAAGAAGGCTCCCTGTCTATATCCTCAGGCTTTTCTTACACTCTGTGTTTCCTGTTCAATGAGCTACAGCCTGATTATTGTCATTGCAGTTTAAATGCACATCATTTATAACGACTATTCCTGTTATCATTTATATCATTCAGTATCGTTATTACACTCCGACCATAGTATATACTGTTTTGTGCAGTATTGTTCTGTAACTTCTACACCACCAAGGTCCATGTTGCTGTACTGGAGTTTTTGATCGAATGATCGTCCTCCttttaatcctatttgaatgtgtatttttatattgtcTTGTGATCTTTTTGTAATGTCTTTCTGTCTAATGTAAAGCACCTTGTTGTTGAAAGGTGTACACTAATAAATGTAGCTTGACATTCATGACTTTGTATGACATATGTATGACacatgtacgtgtatgtgacaataaagtacctttaccagAGCCGTatatatctcaacaactattggaggGATTGTGATGAAATatcattcatgttcccctcaggatgaattgtaaaaacttttgtgatcctctgacttttcatctagcgctATCAACAGGTCAATATTTTAACGTGtcaaatactttggtttatgaccaaatacatgc
>XM_039803141.1
tcttGTTTGTTTCGCAGCAAGAAATCCAGCAGGCCTACACTCAGCTCTCAGTGAGTCAGAGCTATCAGTCTGTACCAGGCCTGTACACGTCTTTATTGGAGGGGAAATGAAAAAGTAATAATTTCTGGTTCTTAATGCAGCAGTTGGTCTTCAGTTGAATGAGTGATGTTCACAGTAGAGCACACCATGGCGACTGCAGCATCAGATGATCTGTATCCTCTGAAGCGCTCGAGTAGCTGTGAGTGGCTGCCACCTAACATGTCTGAGCTGAGGGTTGTTCTGCTGGGGAACAGCTGGTCTGAGAGGAGTTCAGTGGGGAACTTGATACTGGGAGAGACTGTGTTCAAAACTGAGGAAGAACCAGACTGCtgtcagagagtcagaggacagTTGGAGGAGAAAAGAATAGTTCTGATCAACACTCCCGATCTGCTGCACCCCAACATCTCTGAAGAAAAACTGACAGAACATGTAGAAAACTGTGTGAGACTTTCTGATCCTGGCCCTCATGTGTTCCTGCTGGTTCTACAGCCTGAAGACTTCACTGAGAAACACAAAGTGAAGCTCTGCAGAATCCTTGAAAAGTTTAGTGACGGATCATTTAATCATTCATTGGATCTGATATCAACACCCAGAATAGAGAGATCAGGTTTAATGGAAACATACATGGAACACCCTCCATTAAAAGACATGATCAGAAAATGTAGATACAGATACTTGAAGCTGAAGGGTCTTGAACCTCCAGAGCTGTTAACACGCTTGGGTCAAACTGTGAAGGAGAACAATGGAGAGCATGTGAGCTGTGATGTATTTAAGGACACAACATCTACTTTACCAGGTGATCATCAAAGTCCAAAACAAAAGGAAACACAAACTCCCATCACAGATGCTGTTAAAGCTGCTGGGCTGCAACTGGTTAACAAAATCACTGCGCAATTATCACTCTCAGAGAAAACCCCTGTGGCTCACACATCAGCATTCAGGATTGTGCTTCTGGGAAAAAGTGAGGACAAACAGAAAAAGCTTTGTAACTTCATCTTTAGGGACAAAGGTTTTCCTTACCAAAGAATGTCCCAAATCAAGCAAAGTGTGGCCACCTTTGGAGATTGGAGAGGGAGACCATTAACATTAGTGAAAACTCCAGACATGTTCGGTCTGTCTGAGGAGAACGTGAGAAGAGAGGTTATGAGGTGTGTGACTCTTTGTCCTCCTGGACCAAATGTCCTCCTGCTGTTAGTGAAACCATCTGATTTCACTGAGAAGAATAGACAAACACTGAAGTTCATCCTGAGTTTGTTTGGTCAAGATGCCTTTAAGTACTCAATGATCATCATGACACATGAGGGGGATGAAATGAGTGTATGTGTTAATGAACTCCTTAAAGACTGTGGAGGAAGACACTACAGCATGTCTGAAGATGACCACAGATCATTGTTGCAGAAGATTGAGAAGATTGTGCATGAAAACAAAGGAACCTTCCTCACCTTCACTGAAGAGATCATCAGACCAACATCTGGACACATCAGACCAGCTTTAAACCTGGTTCTGTGtgggaggagaggagcagggaAGACTTCAGCAGCCAAGGCCATTTTAGGACAGACAGAGCTCCATTCAGTCTCCAACCCATCAGAGTGTGTTAAACATCAGGGAGAGGTGTGTGGACGTCGGGTGTCCCTGGTGGAGCTGCCTGCCTTGTATGGAGAACGTCAGGAGGCAGTGATGGAGGAATCATTCAGGTGTATCTCCCTCTGTGATCCTGAGGGTGTCCATGCCTTCATCCTGGTCCTACCTGTGGGTCCCCTCACTGATGAAGACAAAGGAGAGTTACAGACCATCCAGAACACTTTCAGTTCTCGAGTCAATCACTTCACCATGATTCTGTTCACTGTGGAGTCAGATCCTACAGCTCCAGATGTTGTTAAGTTTCTTAAGGAAAACAAGGACATCCAGGAGCTCCgtcagagctgtggaggaagatatGTTGTTCTCAACATCGAGGGCCAGCAGCAGATCCCAGAGCTGTTGGATGCTGTGGAAAAGACGATGAAATCtcaaaacaaaccaaatgtCTATACAGCTGAAACCTTTGCACATGTACAAATGGAAAAGATCATACAACAACACCATGAACTTGAAAGGCTGAAGAGCAAGATCACTTGTGATGATGAGAAGCAGAGCCCAGAGTGTCTCAGGATTGTGCTGATAGGGAAGACCGGCTGTGGAAAGAGCTCTTCAGGAAACACCATTCTAGGAAGTAAAGAGTTCAGAGCTGCATCAACCCAAAGATCAGTCACCAAAGAGTGTCAGAAAATTCATCCATTTCTTTTCACAAGAGGAGATTCATTGGAAAATGAGGAGCAGTCCAATGAACAATACATTGAAATGGGATGTGATGCTTCCTTTAAGAAACTGATCGCTGACTGTGGAGGAAGATACCATGTGTTCAATAACTATGATAAACAAAACCGGACACAAGTCAGTGAGCTGATAACCAAGATTGACACCATGGTGAAGGAAAATGGAGGCAGCTGCTACAGCAACGAGATGCTGCAAGAGGCCGAGGCAGCTATACAGAAAGAAGTGGAGAAGATCCTGAAGGAGAAGGAAGAagagatgcagagagagagggaggaactgGGAAGAAAACATAAGGAAGAAATGGAAGCagtgaaaagaaaaatggaagaacagagagcagaaattGTAAAGGAGAGAAAACTGAGAGAAAAAGAACTTGATGAAAAGGAGCAAAACATTAAGAAGGAAcatgaggagagaaagaaagaacagaagatgagagaagaagaagacaggaagagaaaacaagaggaagaaaaTCAACGACAGAAGTGGCAACAGAAAGTTGAAGCTTTGGAGCAAAAAATaagatcagaatcagaatctaaGGAAACCATTGACAAAAAGCTGGAGGAGACCagagaagagatgagaaaaGAACGAGAGAACtgggagaaggaaagaaaagaagagtggGAAAAACGAGAAAAAGAAGATAAACAGAAACAACAGGAGGAGCAAACAAGATTTAGAAAGCTTCAAGAAGAATTCGAAcaggaaagagaaaaatatgaaaagaaaagagaagaagaggacagaattagaagagaggaagaggaaaaagagagaaaagacattGAAGAGAACTATaagaaagaaatggaaaatCTCAAGAAGACACATGAAGAAGGAGCCAGAAAGAAAGCTGAAGAGTTCAATGAgttcaaagaagaaaaaaaaaaagagtttgcaGCTCAGAAGCAAATGCATGAGAAACAAATGAAAGAGAAAGACCAGCAATATGACATCTTAAAGGCACTTTCAGTCCACAAAGAAAAAGAAttaaagaagaaacaaaaagaacaaataaagaaaaaacaggGCGAAATTTATGACTTCCTGAAAAATGTGACCAAAAAGATAGAAGGTCTGTCAGAAATTAATAAGTTAatgaaaaaacatgaaaaagaaatGGAACAGGAGAAAAATGAGGATGTAAAGAAGAGTATGCGGCaacaacatgaaaaagaaaTTATTGACTTGATaccaacattttggaaaaaagaagacaaagaagACGCATCATGGTGGACGCGTTTCACATTCTATTGGTTCTGAAAACTGAAACTCTAAAAATGCAGAgcctttattttgtaatatgtTGCAATGACCTACACTGTAATTCGTACCAATGGGACTTGCATAAATTCTCATTGGCTCTCAGGTGTCTAATCAGCAGCCTGTATAATATTTAACGGCAGCTTTGTAAGCAGTTATCTGACTGTTAAAACTAAAGCCTAGtgcacaaaacaagactttgTAAATCTCAGCATTGTACAGCTCAGACCCGGCCTGTGATTATCTTGATGTGGAGCTGACCACAAAACTGATTTCAGACAATTATTTACTGAttacaattttattttgaattagATGCTTGATTGTAATATTACAagtttatgaaaaataaattttctCTGGTGGTATTGTGACTCATTGTTTTGGAATCAAGATTACTACAAAATATTTCTTTTCTGAAACGGTTGTCTTTCTAATTCCCTCtccacgtaataggatagcgctacaaccaggcagagcaacaaagaaAGTAGCAAAGCTAGTTGACATATTAAACTTTTGACGTAGGCCTGTCCGGTCGgaaaaactccgaacacatcttccttttttaagaatgatttcagtgccgttctttgttcttttctcaaagaaaagcttaactccaagtcttccagaagaccgctgttcccagcagcagcagcagcagccataagccccgcccaccgactagagtttggtttttccagctcacaagccaacggagagtgcctagacctaGGGTGCGTCTAAATTTCTAGGCTAAAATATTACAGCAAAtattaaacaaacaatataatttAAACTGCTTATCAgataaataaacttgaatgaTTATATCTGTCCTTGTTTTGTTACATGTCAAATAAAAATGGTTATAACTGATACACCAATTTAAGACTCatgttatgtattttatatttttttcattctaaACGATAAATAAAGTGTTTATCCTGTAGTTCAGTGTGGACTGTTGGTAATTCTGAAGTCAaaccagaaaaactaaaatctatttatttatttatgtatatcaTTGATCTTAGGAGACTAATGTTACTGGGGATACTGTATAAAAAGTGTGGGCCTATCATAGATGTTATGGTGTACTTGACCCagagagtccaagtcaagtctcagtCTCAAGTCTGCTGCAGCAGCTTACAGAAAAACGTCATCACAAAACATAGGCTATAAAATGCATTACAGTTAAAGTTAAAACATAAATCACCAATTTTAGAGACAGGTCTTCATATTATCACCTGTAACCAGAGGGTGTCTATGAATCCCCACTGTGGTTGTGAAGGTGACTGAGACTGAGTTTGCTCTGTAAAACATTTTGGTGTGTGAATAAGGAGGAATACTCTAATTTCTGCATTGTAATTCATCTGCTTctgctgtttgtgtttctgaCATTAGTGTGATATTTGCAGACATGTGCTAGCTAGCGTCAGCTACCCAGCAGGTGGTGACAGACTGAACAAAGAATGTTCACACTGTTCAGTTGATTCACACAGCTTCATTTCTTCTAAACAGATAATGCCTCATTACAACAACAGGAAGGGGAGAGATATCTGAATGTATCAACAAAAACGCTGTCAAAACATATAACCTGTGTAAGCTTTACAAAACATTTAAcgttttattaattatattgtTTAGTTCCCCTGGCGAAGGAGCCCATCAGTTTATTGATTAATTGATCATTTCAAACTGTGTTAGGTTGAATAACCAATGTATTCTTAAATATCAGTAACTGTATTGTATGTGTCATCCTGTGTGTTTTAATATAATATCTTAAAATATTTAGAGTGCTTGATGCAACAAGAAGGCTCCCTGTCTATATCCTCAGGCTTTTCTTACACTCTGTGTTTCCTGTTCAATGAGCTACAGCCTGATTATTGTCATTGCAGTTTAAATGCACATCATTTATAACGACTATTCCTGTTATCATTTATATCATTCAGTATCGTTATTACACTCCGACCATAGTATATACTGTTTTGTGCAGTATTGTTCTGTAACTTCTACACCACCAAGGTCCATGTTGCTGTACTGGAGTTTTTGATCGAATGATCGTCCTCCTtatacttattttttattttaacctttttaatcctatttgaatgtgtatttttatattgtcTTGTGATCTTTTTGTAATGTCTTTCTGTCTAATGTAAAGCACCTTGTTGTTGAAAGGTGTACACTAATAAATGTAGCTTGACATTCATGACTTTGTATGACATATGTATGACacatgtacgtgtatgtgacaataaagtacctttaccagA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU82867 False 664 lncRNA 0.34 2 15532108 15532796
XM_039803141.1 True 5933 mRNA 0.40 9 15518780 15532628

Neighbor

gene id symbol gene type direction distance location
LOC120560844 LOC104935222,LOC101481450,LOC102294942,LOC106534038,LOC108245882,LOC100710015,LOC107386134 coding upstream 51372 15435741 ~ 15467408 (+)
LOC120560841 ppp2cb,LOC100710281,LOC105920955,LOC101157601,LOC103131405 coding upstream 88198 15416456 ~ 15430582 (+)
mak16 mak16 coding upstream 212680 15298400 ~ 15306100 (+)
LOC120561495 NA coding upstream 220137 15298542 ~ 15298643 (+)
lrrc2 LOC102210414 coding upstream 266441 15242850 ~ 15252339 (+)
LOC120560850 LOC104965067,LOC101155523 coding downstream 25708 15558504 ~ 15562994 (+)
LOC120561471 NA coding downstream 72170 15604966 ~ 15612582 (+)
trnac-gca_19 NA coding downstream 85089 15617885 ~ 15617956 (+)
trnac-gca_20 NA coding downstream 85948 15618744 ~ 15618815 (+)
trnac-gca_21 NA coding downstream 86277 15619073 ~ 15619144 (+)
G61782 LOC106527778 non-coding upstream 142778 15374777 ~ 15376002 (+)
G61770 LOC103398011,LOC102234551,LOC103373450,LOC107386141,LOC106527788 non-coding upstream 204202 15306447 ~ 15314578 (+)
G61757 NA non-coding upstream 277338 15240416 ~ 15241442 (+)
G61754 NA non-coding upstream 293811 15224547 ~ 15224969 (+)
G61756 NA non-coding upstream 294315 15224114 ~ 15224465 (+)
G61867 NA non-coding downstream 71 15532867 ~ 15572973 (+)
LOC120560847 NA non-coding downstream 6559 15539355 ~ 15539844 (+)
LOC120560848 NA non-coding downstream 8073 15540869 ~ 15545477 (+)
G61966 NA non-coding downstream 428805 15961601 ~ 16045838 (+)
G61968 NA non-coding downstream 502655 16035451 ~ 16056705 (+)
zgc:101664 NA other upstream 83845 15431708 ~ 15434935 (+)
spinb spin1,LOC103373448,LOC108245887,LOC101477468,LOC100698355,LOC106527790 other upstream 166155 15249744 ~ 15352625 (+)
nudt18 nudt18,LOC104957221 other upstream 294765 15219137 ~ 15224015 (+)
G61535 LOC103368073 other upstream 435332 15078874 ~ 15083448 (+)
cntrl NA other upstream 538983 14928373 ~ 14979797 (+)
mctp1a mctp1,LOC102782783 other downstream 104002 15636798 ~ 15777141 (+)
fam172a fam172a,LOC102785942 other downstream 410902 15943698 ~ 16099484 (+)
LOC120560890 NA other downstream 935514 16468310 ~ 16475905 (+)
LOC120560897 LOC105925468 other downstream 1000120 16532916 ~ 16534175 (+)
LOC120560947 edil3 other downstream 1752852 17285648 ~ 17414595 (+)

Expression


Co-expression Network