LOC120561342


Basic Information

Item Value
gene id LOC120561342
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 19711448 ~ 19731573 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>TU84540
CCTCCaaaaatactatatatactgACAACTAATTGTTCTAAAAGTCACTGACTCCTGACTGCAGCTGAAGGTTCAACGTGGGACTTCCAAGACATCACAGGTTTGTCTTTTTCAGAGATGAAGTGGGCTTTGTGCCTGCTATCTGCAGGTCTTTTCCTGTGTTTGCAAAACCATGTGAATGCCGAACAACGTTTGAGCAGGAGTGTCATTGAAAATGCTGTGCTTGAAGCCAAGGCAACAGTGGATTCAACTTATGAGTACTCCAGAAGAGTGAGCCTTGATCGTGTGAGGAGGAATACAGCGAATCCTTCAGACATCCTGAGGCTGATGAAGCAGCCTGTTGGGCCAACCCGTACTGCTGTGCGTGCTGCTGACTATATGGATAATGCTGTTAATCTGATCAAGAGATCTTTGAAAAGACGTGAAAAACGCTCCATAAATGACAC
>XR_005639588.1
TGTGCCTGCTATCTGCAGGTCTTTTCCTGTGTTTGCAAAACCATGTGAATGCCGAACAACGTTTGAGCAGGAGTGTCATTGAAAATGCTGTGCTTGAAGCCAAGGCAACAGTGGATTCAACTTATGAGTACTCCAGAAGAGTGAGCCTTGATCTGTGAGGAGGAATACAGCGAATCCTTCAGACATCCTGAGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU84540 True 446 TUCP 0.45 4 19711448 19731573
XR_005639588.1 False 194 lncRNA 0.47 3 19730681 19731329

Neighbor

gene id symbol gene type direction distance location
ebf2 LOC101476299,LOC100704273 coding downstream 8355 19671019 ~ 19703093 (-)
ank1a LOC103374899,LOC102197896,LOC108234527,LOC101476008,LOC106585259,LOC104941581 coding downstream 64430 19555383 ~ 19647018 (-)
ccdc117 ccdc117 coding downstream 175306 19532679 ~ 19536142 (-)
rhbdd3 rhbdd3 coding downstream 348974 19357954 ~ 19362474 (-)
si:ch211-225b11.4 LOC103353536,LOC104950175 coding downstream 460611 19237905 ~ 19250837 (-)
usp39 usp39,LOC102783496 coding upstream 22560 19754133 ~ 19761050 (-)
mat2ab mat2a,LOC102784064,LOC101478089,LOC104920308 coding upstream 41123 19772696 ~ 19777584 (-)
inpp5jb LOC103363185 coding upstream 49549 19781122 ~ 19797559 (-)
smtnb smtn coding upstream 75148 19806721 ~ 19857165 (-)
trafd1 trafd1 coding upstream 128010 19859583 ~ 19872029 (-)
G63039 LOC100705440 non-coding downstream 171328 19536578 ~ 19540120 (-)
G63060 NA non-coding downstream 180822 19530421 ~ 19530626 (-)
LOC120560999 NA non-coding downstream 193996 19514668 ~ 19517452 (-)
G63050 NA non-coding downstream 202184 19505488 ~ 19509264 (-)
G63034 NA non-coding downstream 257393 19453851 ~ 19454055 (-)
LOC120560986 NA non-coding upstream 262000 19993573 ~ 20001773 (-)
LOC120560985 NA non-coding upstream 279324 20010897 ~ 20012908 (-)
G63282 NA non-coding upstream 289731 20021304 ~ 20021674 (-)
G63283 NA non-coding upstream 293326 20024899 ~ 20025407 (-)
G63284 NA non-coding upstream 294339 20025912 ~ 20026668 (-)
LOC120560442 LOC104920315,LOC103374896,LOC100704901 other downstream 156540 19549451 ~ 19554908 (-)
si:ch211-225b11.1 LOC103353539,LOC101465611,LOC100705171 other downstream 474362 19179505 ~ 19237086 (-)
ficd ficd other downstream 608974 19100244 ~ 19102474 (-)
mmab mmab other downstream 974042 18734908 ~ 18737406 (-)
G62626 LOC103357464 other downstream 1199187 18510155 ~ 18512261 (-)
LOC120561469 NA other upstream 377843 20109416 ~ 20124872 (-)
G63345 NA other upstream 537547 20269120 ~ 20282211 (-)
LOC120560417 LOC104920278,LOC103361005,LOC106523804,LOC103398708,LOC101066291,LOC101475922 other upstream 720021 20451594 ~ 20477805 (-)
G63487 NA other upstream 960305 20691878 ~ 20692279 (-)
ntrk2a ntrk2 other upstream 1748213 21479786 ~ 21584276 (-)

Expression


Co-expression Network