LOC120559997


Basic Information

Item Value
gene id LOC120559997
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 13945038 ~ 13961157 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802081.1
CTCAGCAACAGCTGAGTGTATCTACAGTAACAGCCCTGCTGGTAAAATCAGCGTTTGGGTGTGGATCCATATTCACAGGAACATTACAAAATGGGACTTCATTCAAGATCTACACGTATGATTCCTCGGGGAGCCTGCTGAAAGACTTGAATGTCTGAATGAGAGCAGTAAAACTTGTTGGATGTGGGATGAATGACAGGAGGAAGCCTCAAGCAGAGTGTGCTGCAGGGGACAGCATGTATGTCCACAGCGTGCAGAAGAGGAACTTTCAGTCCAAACCCTTTTCAGAGAGCACAGTGTTCACTTTGCTTCCACCAAGACCCCGGTCCGATGGAGACACAGTGCTTTCCTCCAGAGGCTCGAAACTCCTGAGCCTGCAAGTACAGGGGTTCTGTTGTCCCCTACAGCAGAGGCCCAGCAGTGGGACGGTGACACGCAGGGTGACACCACCGagtagagagggaggagaggggagccTGACAATGTTAAGCAGTCTCAGAGGAAGGCTGGAGAGCAGAGGAAACCCAGCTTTAAGGTCCAGTACTGGGAGCAGACCTAAGAGGACTCCAGAAGGCGGACCTCCCACTGTATGCCATCCCAGAGAACCAGTCAGTAAAACAGCAGAAACTCCCACAACCCCCTGCGACAAAAAGAGGCAGGCTCGTCACGGTCATCCCGGCGCCACAAAGGTTTCCGAACTTCATCTGTATCTGCCTTTATCGATCTGTGACGATGAAGAGCAGGATGCTGAGACAGAGGAGATGAGGACTCCAGCAGAGGAGACTAGCGCTCCGGAATCCGAGGTCAATCCAAACAATGCAAACCATCTGGCGTTTACCCATCCTTCACACACCAGACAAGACCAACCTAACGCAGGACCCAGCACACCATCTGACAGCACAGCTGAGATGTCAAGTTGCTGAATCAGTGacttcttttaaatcacttcttaaaagacatttttataGACTTGCTTTCATGTGAtgctgtcttttaaaaaaatcttttcatcCTTTTGCCTTTTCTCTGTTCATAGCCACTTACTGACTGTTCTCCTATAACTTGATATTTCCACTTATCTTCGAATTttc
>XM_039802082.1
CTCAGCAACAGCTGAGTGTATCTACAGTAACAGCCCTGCTGGTAAAATCAGCGTTTGGGTGTGGATCCATATTCACAGGAACATTACAAAATGGGACTTCATTCAAGATCTACACGTATGATTCCTCGGGGAGCCTGCTGAAAGACTTGAATGTCTGAATGAGAGCAGGAGGAAGCCTCAAGCAGAGTGTGCTGCAGGGGACAGCATGTATGTCCACAGCGTGCAGAAGAGGAACTTTCAGTCCAAACCCTTTTCAGAGAGCACAGTGTTCACTTTGCTTCCACCAAGACCCCGGTCCGATGGAGACACAGTGCTTTCCTCCAGAGGCTCGAAACTCCTGAGCCTGCAAGTACAGGGGTTCTGTTGTCCCCTACAGCAGAGGCCCAGCAGTGGGACGGTGACACGCAGGGTGACACCACCGagtagagagggaggagaggggagccTGACAATGTTAAGCAGTCTCAGAGGAAGGCTGGAGAGCAGAGGAAACCCAGCTTTAAGGTCCAGTACTGGGAGCAGACCTAAGAGGACTCCAGAAGGCGGACCTCCCACTGTATGCCATCCCAGAGAACCAGTCAGTAAAACAGCAGAAACTCCCACAACCCCCTGCGACAAAAAGAGGCAGGCTCGTCACGGTCATCCCGGCGCCACAAAGGTTTCCGAACTTCATCTGTATCTGCCTTTATCGATCTGTGACGATGAAGAGCAGGATGCTGAGACAGAGGAGATGAGGACTCCAGCAGAGGAGACTAGCGCTCCGGAATCCGAGGTCAATCCAAACAATGCAAACCATCTGGCGTTTACCCATCCTTCACACACCAGACAAGACCAACCTAACGCAGGACCCAGCACACCATCTGACAGCACAGCTGAGATGTCAAGTTGCTGAATCAGTGacttcttttaaatcacttcttaaaagacatttttataGACTTGCTTTCATGTGAtgctgtcttttaaaaaaatcttttcatcCTTTTGCCTTTTCTCTGTTCATAGCCACTTACTGACTGTTCTCCTATAACTTGATATTTCCACTTATCTTCGAATTtt

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802081.1 True 1091 mRNA 0.49 5 13945038 13961157
XM_039802082.1 False 1059 mRNA 0.49 5 13945038 13961156

Neighbor

gene id symbol gene type direction distance location
LOC120561313 olfml2a coding upstream 42389 13869682 ~ 13902649 (+)
adgrd2 NA coding upstream 298688 13567559 ~ 13646350 (+)
lhx2b lhx2 coding upstream 578828 13349141 ~ 13366210 (+)
bcl2l16 LOC103353844,LOC104923787,LOC108246437,LOC104963815 coding upstream 1012039 12909814 ~ 12932999 (+)
si:dkey-90l8.3 LOC104923788,LOC103353846 coding upstream 1079786 12860590 ~ 12865252 (+)
atad1a atad1,LOC101479261,LOC100705680,LOC104934768,LOC102292399,LOC106527948 coding downstream 25074 13986231 ~ 14000271 (+)
piwil2 piwil2 coding downstream 186413 14147570 ~ 14188917 (+)
LOC120560074 NA coding downstream 237598 14198755 ~ 14211704 (+)
LOC120560659 LOC103369208,LOC102291259,LOC102215744,LOC101478239 coding downstream 251082 14212239 ~ 14233388 (+)
idua idua coding downstream 273121 14234278 ~ 14246305 (+)
LOC120561318 NA non-coding upstream 39698 13904693 ~ 13905340 (+)
LOC120561317 NA non-coding upstream 40380 13903363 ~ 13904658 (+)
LOC120561319 NA non-coding upstream 119804 13812112 ~ 13825234 (+)
G61259 NA non-coding upstream 258126 13686631 ~ 13686912 (+)
G61258 NA non-coding upstream 260832 13683996 ~ 13684206 (+)
G61332 NA non-coding downstream 99765 14060922 ~ 14061171 (+)
G61376 NA non-coding downstream 300998 14262155 ~ 14262869 (+)
G61389 crybb3,LOC103469711 non-coding downstream 364233 14325390 ~ 14327533 (+)
G61391 NA non-coding downstream 367023 14328180 ~ 14329747 (+)
G61431 rnf10,LOC102784202 non-coding downstream 404075 14365232 ~ 14368488 (+)
LOC120560904 crb2,LOC103353841,LOC106959700,LOC106929552 other upstream 764547 13132098 ~ 13180491 (+)
G61139 tubb2b,tubb4b,LOC103024866,LOC101061694,LOC105901187 other upstream 1021202 12921147 ~ 12923836 (+)
G60897 NA other upstream 2018437 11926183 ~ 11926601 (+)
LOC120561144 NA other upstream 3192598 10748116 ~ 10752440 (+)
LOC120561142 NA other upstream 3198085 10726438 ~ 10746953 (+)
G61337 LOC100705941,LOC102292089,LOC108234925,LOC106529513,LOC104934772,LOC103365846 other downstream 146326 14107483 ~ 14109546 (+)
G61338 htr7,LOC104934772,LOC101065316 other downstream 180285 14141442 ~ 14142050 (+)
LOC120560400 tmem150a,LOC106585116 other downstream 291099 14252256 ~ 14281771 (+)
G61383 NA other downstream 322260 14283417 ~ 14283871 (+)
G61390 crybb2,LOC108234953,LOC100703162 other downstream 356382 14317539 ~ 14319506 (+)

Expression


Co-expression Network