LOC120560310 (LOC103361049,LOC104963356,LOC100691800,LOC102799434)


Basic Information

Item Value
gene id LOC120560310
gene name LOC103361049,LOC104963356,LOC100691800,LOC102799434
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 34588133 ~ 34592716 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039802646.1
CAGCTGCAAGGGGAGGACGGTTTGCGGTTCTGCAGCATCACACTGGCATCTCTGGTTCTGCGTTGGAAATTTGCTTCTCGAGGATGCACGAATGCACATATTTCACACTCGGCTGCAGCAGACTTTGGCTTGCATACACCGATGGATTACTGCTTCTTTAAGAAACTGGCTCCCTGCCCACTGAGGGAGAAAAGATGCTGATTTAGGAAGGGAAAAAAGCACTCTGTTTTTGGAGCGGAAGACTGAACGGGCCACTTCAGGATCAGAAAAGAGACTCTGATGACAGGTTAACGGCTGCGTTGAGCTGaaaccgccccccccccctcctgctCCCTACTCCCCCCCCCAGTCCAAACATGAACTCTTCCTCCGATGCAAACCAAAGTGGCTCTCCCCCGTTCTGCCTGCTGGGCGCCGCGGGTTACTCCCGCAGCCTGGATACCTGCGTGCTGGAGGTGGTTGTCATTCTCTTCCTCACCGTGCTCATCATCGCGGGCAACCTGGTGGTGATCTTCGTCTTCCACTGCGCCCCGCTGCTGCACCACCACACCACCAGCCACTTCATCCAGACCATGGCCTACGCCGACCTGCTGGTGGGCGTCAGCTGCCTGGTGCCCTCGCTGTCCCTCCTCCACTACCTCCGGGGCCTGAATGAGGAGCTCACCTGCAAGGCGTTCGGCTATATGGTTTCCGTGCTGAAGAGCGTCTCCATGGCCTCGCTGGCGTGCATCAGCGTGGACCGCTACATTGCTATCACCCGTCCTCTGTCGTACGCCACGCTGGTGACGCCGTGCCGGCTGAGGGCGTGCATCGTCCTCATCTGGGTTTACTCCGCCCTGATCTTCCTGCCGTCCTTCTTCGGCTGGGGCAAGCCGGGTTACCACGGGGACATATTTCAGTGGTGCGCTGACTCTTGGGAGACCAACCCTGGGTTCAGCACCTTCATCTTGGTGCTGCTCTACGCGCCGGCAACGCTCACCGTCTGCTTCACCTACGGGAGTATATTCCGAATCTGCCGGCAGCACACGCGGGAGATCACCCAGCGCCACGCTCGCTTCAGCTCGCAGACGGAGGGCGATAAAGGCGAACGGGGGGAGCGCTGCGAGGGCTGCCCGGACAAACGCTACGCCATGGTGCTCTTCCGCATCACTAGTGTCTTCTACGTGCTGTGGATGCCGTACATCCTCTACTTCCTCCTGGAGAGCGCCGGGCTGTATCACCACAAGGTGGCGTCCTTCCTCACAACATGGTTGGCGATTAGCAACAGCTTCTGTAACTGTCTCATCTACAGCCTCTCCAACAGCGTCTTCCGGAAAGGTCTCGGCCGCCTCTTTAGCCCGTTGTTTTCCTCCTGCCTTGGCTGCATGGACGCCAAAAAGGCTCCAGCTCCCATCAGCCCGTGAGCAGACCCTCGATGGGTATGGGAAGTATGAGCCCTGACAACGATGAATTCGGTTGGGTCTCGGATTTCTTTAAGGTTTGCTTTGCACTCCGCTGCATAGCATGACACAGGTCTTTTTGGTCCCGCATTAAAATATGTTGAGGACCCCCTGCACGGAGCATGCAGAGGTGCCCGTGCAGATGCCTGTCGGTCGTCTCAAAGGCTGATTTTTGTGGAGGCTATGAAGCTTTCTCAAATGCTCTCGAGTGTCATGCTGCTCTTTCATGGCTGCAAAGATCACAAGCTGACGACACAGTAAAGAAGTTTGATATTGATAAAGAAAGTGGACTGTAGGAATAGGATTCATGTGTGTGTCACTTCAATGGATTTAATAAACCCTCTCGCCTGCACTGACTTAACAACTCCcagaagcaaaaaaaataataggaaAGCACAGCGCGACTTGTGTTGTTGCAATCCactgaaatgcaaaaaatattttgaatCTTTTCAAGCCTGCCTGAAAAATCTGCAAATTGTCTTGGTTTTTTCAGGGTAGAATCAGGTGATGCAAAAAATGTTGACACTACACTTGAAACAGACTACTGATCTGTTTCCCTTTTAGATTTTATGAGTGTATGAAAATCTGATAATCAGCCTGTGTGTGAGTTAAACATGTGTATCAGATGGACTTTAAGCTCATTTCCCAGAGAGAAGATTGAGGTTTATTTcagagcttgtgtgtgttttattcctCTCTTTTGAAGCTGGGTGTTAGCGGGAAGCTTCAAGTATGTTTACACGGTCTTGGGTTTCACATGAAATTGTTGATTGAAGAATTAGCTTTACTTACTAAGAAGGCCACTGACCGGGGACATTTTGCTGCCGGCAGACAGTGGCATGTCCTCATCAAAGAGACAATACATAGTATTTATTTGAAGAGTTGTATTCTCTGTTTGCATTTCCTCCTCAGGTTTATCAGCGGTTCTTTGTTAAGCCTCTGGGCTGTTTGCCTTTTGAGCTCAGCTGAAACAGTACATGACTCCTAAATCACAAGCCACGTAGCGTCTTAAGATAATCACCTCCTGACCTGTCACGTGTTGGTGAATCTGCTGTCTGCCGGGATACACCCGAACACCATGCAAAGACTAACTTGACTGTAGTCTTTATTGCTTGTGTCTCTTGAGCCCTCAAGCAGGTAACAGCTGTTCCAGGGTGAAGTGGATGAGAAGCGTTATCGCTGTGCATCACGAGCCCGACTTCAGAGTGTAAGAGGGTCAGAGCACTTTTTCAGAGAGCCAGTGACCACTTGCGGCTTCATGTAAATAGACTTCAGagtttaaatatttaaacagtggCTAACTGGGCCCCTGATGTAAAGTAGGCCTCTATGATTACAAATGATCTTGTGGATGGAGTGCTGTTGCGTGTTTCATAAAATACTTTATTTGTCACAGCCAAGAGGTCTGACACGCGACACTCAAGACtgaatctgtttgtttttttacagtgtggagAAGAAGAAGTGATTCTTTACGAACTGCAGGGAGATTTAAGACCTAAAGATTTAAGTGCTAGAGTTTTAAAGTCACAATGAAATGGTATTTCTGAGAGCGTCTTGCTCTTGAATTTGATATATTTGTGGTGGttgaaaaagaagaggaaacaaaaaaaacccacaataGCCCAAAGTATATGGACGGCCGATCACCAACCTTTGTGTAGCCGACTTTATCTGGGGCTGTTCTCAAGGTTTTGGGCTCCTGAGATTTTTAAGCAACAGCATACGTAGGTATTTTCAAAGGCAAAACAAAGCCTTGGATCAaattcagattttctttttttttataaatgtatattcTTTCCGTGGAAATAGCATGCTAAATTTGCAGTAAACTATAAAATTTAACTGAAAACCAAACCCCAGTTTGCAACACTCTGGTGTTGTAAAttgatgtgtattttatttatttattggttaATTTAACAGGGAAAGTTTACATTAATAAACCTTGCTGCCAATGAGCCGGATAGAAGAACCTGCAAGAGAAACTGTCATCTAAGCATAAGAACTATATCAAGTTAGGGTTAGCCTGAACTTGGGCCACATTTTTCCTCAAATATTATGTGTAAATGACATTTTTCGATGAGGTTATTTCATATCTCAATAATGATATTTATCACGATATAGCATGTTTTCtagtaattaataaataaatacataattattatgtatttaaatacacaattatttaataaataaatagtctatATGAAATAGCTACATGGTAAAGGCTATTTTTGTATATCAGTACTTGCATCGTCAAAATGACGCAAATATGGGCACCttgatagctcagttggtagagggggcgcccatatgtagaggtttactcctccacgcagcgggccagggttcaactccgacctgcagccctttgctgcatgtcattccccctctttctcccctttcatgtcttcagctgtcctgtcaaataaaggcctaaaaatggcccaaaaaaatGACGTTACTATAATATTGCCATAATGCAGTTTGGCTGCTGGTATTTCAAAATCGCGATAAAAACTATGATTTTGACTTTGAAGACAACTTTTCTgtgatatgttaaaaaaaaataaaaaatactcgAAACATAGTTGAaaatgcagtttagttgtatgggAACGTAATTTTAGGAGACAGAGCTGAAGAATGTGTATCGTTTGTCTAAGATTTTCCAAAGTCAGAGTGCAGATTGTAGGTGATATGTTCGGCCTGTACCAATGAATTTAGGGGTAAGAAGACATAAAATAAAGGCAGTACATCTCATCTGTTACACAGTTTCCCGGCTGAACTGAATATGGTAAACCATTCAGCTTTCCTGTAGGGCACCCCCAAACTagtgatagaccgattatcggccctggaCGATTATCGGTCCGTTTGCAGATCTTTAtcggcgttttatttgcctgataaatGATAAAGTTAATTCGttaaaaagtgcgctactttggctcggctacagctctgtgtctgtccctctgcttcggtttcactcaccactgagtctgacttaatctATGACTTAGACTTTCTGACTCTCTTTTACTgcgtattatgttgaaagttcagcttaaagcatttaaacaaagtttggtaacactttacttgaagatatgtacgtaagagtgacatgaca

Function

NR:

description
PREDICTED: probable G-protein coupled receptor 21

GO: NA

KEGG:

id description
K04318 GPR21; G protein-coupled receptor 21

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039802646.1 True 4584 mRNA 0.46 1 34588133 34592716

Neighbor

gene id symbol gene type direction distance location
p2rx7 p2rx7 coding upstream 24982 34551118 ~ 34563151 (+)
gstt1a LOC104934872 coding upstream 52428 34527409 ~ 34535705 (+)
smarcb1a smarcb1,LOC103361055,LOC106521870,LOC108242792,LOC100696262,LOC105917974 coding upstream 149626 34427821 ~ 34438507 (+)
si:ch211-251j10.3 ralgds,LOC102776401 coding upstream 166639 34351711 ~ 34421494 (+)
gle1 gle1 coding upstream 243934 34331842 ~ 34344199 (+)
sh2d3cb LOC103373862 coding downstream 182033 34774749 ~ 34805947 (+)
tor2a tor2a,LOC102798550 coding downstream 216368 34809084 ~ 34814495 (+)
LOC120561071 NA coding downstream 292822 34885538 ~ 34895629 (+)
LOC120561072 NA coding downstream 358786 34951502 ~ 34952477 (+)
mymk tmem8c,LOC107720238 coding downstream 532843 35125559 ~ 35131747 (+)
G66769 NA non-coding upstream 78520 34508142 ~ 34509613 (+)
G66695 NA non-coding upstream 101382 34486538 ~ 34486751 (+)
G66692 LOC104949787,LOC104934882 non-coding upstream 131384 34456490 ~ 34456749 (+)
G66689 NA non-coding upstream 148205 34430942 ~ 34439928 (+)
G66652 NA non-coding upstream 306204 34187830 ~ 34281929 (+)
G66830 NA non-coding downstream 222873 34815589 ~ 34816327 (+)
G66834 NA non-coding downstream 236176 34828892 ~ 34829654 (+)
G66907 NA non-coding downstream 407562 35000278 ~ 35002196 (+)
LOC120561203 NA non-coding downstream 662945 35255661 ~ 35258072 (+)
G66997 NA non-coding downstream 796060 35388776 ~ 35417807 (+)
cfap157 NA other upstream 60728 34514010 ~ 34527405 (+)
G66578 NA other upstream 811735 33775925 ~ 33776398 (+)
antxr2a antxr2 other upstream 984508 33517599 ~ 33603625 (+)
cds1 cds1,LOC103364266,LOC106922331,LOC103134889,LOC107386064 other upstream 1475317 33077246 ~ 33112816 (+)
slc39a14 slc39a14 other upstream 1975195 32572200 ~ 32612938 (+)
LOC120561070 NA other downstream 173214 34765930 ~ 34773806 (+)
G66832 NA other downstream 268783 34861499 ~ 34864690 (+)
LOC120561428 fam163b,LOC103374717,LOC102797860,LOC101061299,LOC102298266,LOC101485828,LOC104964271,LOC102215914 other downstream 454128 35046844 ~ 35059631 (+)
LOC120560625 cep120 other downstream 929949 35522665 ~ 35549231 (+)
G67146 NA other downstream 1248158 35840874 ~ 35852056 (+)

Expression


Co-expression Network