LOC120560525


Basic Information

Item Value
gene id LOC120560525
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 15508922 ~ 15520405 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803140.1
ATGTTGGTGTCTCTCAGCCTCCTCTTCTGTCTTCCACCTGCAGACAGTCTGACAGTGAAAGCAGCCTCTGGACGTCCAGGAAGTAAAGTCTTTATTCTAGGAAGTAAAGTGTTCAGAGCCGCATCAAGCCAAAGATCAGTCACCAAAGAGTGTCAGAAAGCAGAGACCGTAGTGAACGGTCGTCCTGTCGCTGTGGTCGACACTCCTGGTCTGTTCGACACAACTTTGTCCCATGAAGAGGTGTATGAGGAGATGGTGAAATGCATCAGTCTTCTGGCTCCAGGACCTCATGTCTTCCTGTTGGTGTTAGGAATTGGCAGACTCACATCAGAGGAAAAGGAGACATTAAAACTCATCAAGGTCGTCTttggaaaaaaatctgaaaatttCACCCTCATTCTTTTCACAAGAGGAGATTCACTGGAACATGAGAAGCAGTGTGTTGAGGAATACATTCAAGAAGATTGTGATGATTCCTTTAAGAAACTGATCGCTGACTGTGGAGAAAGATACCATGTGTTCAATAACTATGATAAACAAAACCAAACGCAAGTTATTGAGCTGATAAACAAGATTGACACCATGGTGAAGGAAAATGGAGGTGGCTGCTACAGCAATGAGATGCTGCAAGAGGCCGAAGCAGCTATACAGAAAGAAGTGGAGAAGATCCTGAAAAACATGGAAGGAGTGAtgcagagagagcgagaggaacTCGAAAGACAACATGgagaagaaatgaaagaaatggaaaaaagaaTCCCAATTGCAATGAAGTGCTTTAAAAGGATAGTCCTGTCCCACATCAACAGAACCATCCCAGCCACCCTGGGCCAATTACAATTTGCGTATCGACAGAACCGGTCCACTGACGATGCTGTCAACGCCAACATCCACACAGCCCTCATGCTTCTTAAAGGCAAAGACGCATATCAAGAAATCCAGCAGGCCTACACTCAGCTCTCAGTGAGTCAGAGCTATCAGTCTGTACCAGGCCTGTACACGTCTTTATTGGAGGGGAAATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803140.1 True 1023 mRNA 0.45 5 15508922 15520405

Neighbor

gene id symbol gene type direction distance location
LOC120560844 LOC104935222,LOC101481450,LOC102294942,LOC106534038,LOC108245882,LOC100710015,LOC107386134 coding upstream 41514 15435741 ~ 15467408 (+)
LOC120560841 ppp2cb,LOC100710281,LOC105920955,LOC101157601,LOC103131405 coding upstream 78340 15416456 ~ 15430582 (+)
mak16 mak16 coding upstream 202822 15298400 ~ 15306100 (+)
LOC120561495 NA coding upstream 210279 15298542 ~ 15298643 (+)
lrrc2 LOC102210414 coding upstream 256583 15242850 ~ 15252339 (+)
LOC120560850 LOC104965067,LOC101155523 coding downstream 38099 15558504 ~ 15562994 (+)
LOC120561471 NA coding downstream 84561 15604966 ~ 15612582 (+)
trnac-gca_19 NA coding downstream 97480 15617885 ~ 15617956 (+)
trnac-gca_20 NA coding downstream 98339 15618744 ~ 15618815 (+)
trnac-gca_21 NA coding downstream 98668 15619073 ~ 15619144 (+)
G61782 LOC106527778 non-coding upstream 132920 15374777 ~ 15376002 (+)
G61770 LOC103398011,LOC102234551,LOC103373450,LOC107386141,LOC106527788 non-coding upstream 194344 15306447 ~ 15314578 (+)
G61757 NA non-coding upstream 267480 15240416 ~ 15241442 (+)
G61754 NA non-coding upstream 283953 15224547 ~ 15224969 (+)
G61756 NA non-coding upstream 284457 15224114 ~ 15224465 (+)
G61867 NA non-coding downstream 12462 15532867 ~ 15572973 (+)
LOC120560847 NA non-coding downstream 18950 15539355 ~ 15539844 (+)
LOC120560848 NA non-coding downstream 20464 15540869 ~ 15545477 (+)
G61966 NA non-coding downstream 441196 15961601 ~ 16045838 (+)
G61968 NA non-coding downstream 515046 16035451 ~ 16056705 (+)
zgc:101664 NA other upstream 73987 15431708 ~ 15434935 (+)
spinb spin1,LOC103373448,LOC108245887,LOC101477468,LOC100698355,LOC106527790 other upstream 156297 15249744 ~ 15352625 (+)
nudt18 nudt18,LOC104957221 other upstream 284907 15219137 ~ 15224015 (+)
G61535 LOC103368073 other upstream 425474 15078874 ~ 15083448 (+)
cntrl NA other upstream 529125 14928373 ~ 14979797 (+)
mctp1a mctp1,LOC102782783 other downstream 116393 15636798 ~ 15777141 (+)
fam172a fam172a,LOC102785942 other downstream 423293 15943698 ~ 16099484 (+)
LOC120560890 NA other downstream 947905 16468310 ~ 16475905 (+)
LOC120560897 LOC105925468 other downstream 1012511 16532916 ~ 16534175 (+)
LOC120560947 edil3 other downstream 1765243 17285648 ~ 17414595 (+)

Expression


Co-expression Network