zgc:101664


Basic Information

Item Value
gene id zgc:101664
gene name NA
gene type misc
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 15431708 ~ 15434935 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803724.1
GTTTCCGGGAAGCGCACAACACAGAATTGGGATACAGCTTGTTAGTTGATTGGAACTTTACTCCTTGGCTGTTGAGAGAGAACCACAAACGGCTGATTTAAAGACTCCTGCCGTGTTCCCATCATTCATTGCATTGTCTAGCTAAATCAACCTCATCatgaggaggaagatgaggaggagcgTGGTGCAGTCAGTCATTTGATCTGTATGGATGATGTGGTTCTGCACTATCAGCCTGGATCAGCTGCTGGGTTCAGCTGTCTGttagagaggacagagaagctTCTGGTGACTTTCCCCTGCCGGACACCTCAAGTCTTCAGCCCCTGGTCCCCCAGCGCCGCAGACCGCCACCTGCCCATCAGACCGGCCAAACCAGCTCCCATCATCACATGCTCACGGGATTTACTCGTCTCTGACAGcaggacacacactgacacagcacAAATCCAACTGCAAGAACCTGAAGTTGACAGTCTTATTGCTGAAAGACCTCATAACCAACCATCAACACCAGCTGAAAATCCACAAGAACCTAAAGATGCCTCCTGCGTTTCAGAGACCCAAAACCCTCTCCTCCCAGAGAGAGAGGTCACCAGACTGCCTCCTAAAAAACACAAAGGCAAAGACGGCTTTCCTGTCACTGACTCGCCGGTCAAACGGTCCTGGAGCATCTTTACACATAAAGGAGTTCTGCTGCAGAGCTCCCAGTCGCTGTCCAAGCAGTTCCGTAACATGGTGTCGACCCACAGGCTCCACCTCCACCAGAGGGCCAAATGGGTGATCTGTCAGCACAACTGTGGGGCGGCCAGAGACATTGAACAGGTGTGGCGGGCTCTGAGCCGGGCCATGCAGAGCTCCAGGCTGCAGACGTGTAACGCCAACATCCAGAGGGAGCGTGCGGAGATCTGGGTGTTTTGTGACGTTATCCAGTCCGAGCAGGTGGGACGTGTCCTAAAGGGTGAGCTGCAGCTGTCGGGGAGGATCTGCCTGTCGGTTCACAGACTGGGAAACATCTTCAGCATGTAGCGCATGAGCATCAGCTGGAACAGTATGATCAATACAAAGAAGGCCCAGAATCAAATATGACAAACATGTTTACAGGTCCAGATGTTATGATCACACTAAGATGTCTCCATTATTAGAGGACAAACATGCAGTCTTGATTGTTTACTAATTTACTTGATATTTTATCCCATCTTGGGGAAACTATGAATACTACTGATGTTAGTGATCACATTACCTTTTTCCTCTAATGCAGTGCTTCTGAACTACTGGGCCATACACTGGTGCCAGGCTGTGAGGAATATTTGACCACTGGTTTCTAAAACCAGGATATGGTGtttacatgtgtatatataaatttGAGAACAGATGCTTATGATAGTATTTTTATATTGATTGTCTCGCTaatgtaaataaagatataATGGTTTAAATACA
>XR_005639522.1
GTTTCCGGGAAGCGCACAACACAGAATTGGGATACAGCTTGTTAGTTGATTGGAACTTTACTCCTTGGCTGTTGAGAGAGAACCACAAACGGCTGATTTAAAGACTCCTGCCGTGTTCCCATCATTCATTGCATTGTCTAGCTAAATCAACCTCATCatgaggaggaagatgaggaggagcgTGGTGCAGTCAGTCATTTGATCTGTATGGATGATGTGGTTCTGCACTATCAGCCTGGATCAGCTGCTGGGTTCAGCTGTCTGttagagaggacagagaagctTCTGGTGACTTTCCCCTGCCGGACACCTCAAGTCTTCAGCCCCTGGTCCCCCAGCGCCGCAGACCGCCACCTGCCCATCAGACCGGCCAAACCAGCTCCCATCATCACATGCTCACGGGATTTACTCGTCTCTGACAGcaggacacacactgacacagcacAAATCCAACTGCAAGAACCTGAAGTTGACAGTCTTATTGCTGAAAGACCTCATAACCAACCATCAACACCAGCTGAAAATCCACAAGAACCTAAAGATGCCTCCTGCGTTTCAGAGACCCAAAACCCTCTCCTCCCAGAGAGAGAGGTCACCAGACTGCCTCCTAAAAAACACAAAGGCAAAGACGGCTTTCCTGTCACTGACTCGCCGGTCAAACGGTCCTGGAGCATCTTTACACATAAAGGAGTTCTGCTGCAGAGCTCCCAGTCGCTGTCCAAGCAGTTCCGTAACATGGTGTCGACCCACAGGCTCCACCTCCACCAGAGGGCCAAATGGGTGATCTGTCAGCACAACTGTGGGGCGGCCAGAGACATTGAACAGGCTTTAGAGCGAGACAGTAGATGTGGGGAGAGAGGAAGGTATGAGATGCAACTCCGTTCCCCTGGACCGGCGGGAATCTTACCGTGGACGTTGGGGTGGTGTGACATGCGCCCTAAACATTAGGCTAcagtcagcatgctaacaggctcacaatgacaatgctaacatgctgatctTTAGAAGGTGTGGCGGGCTCTGAGCCGGGCCATGCAGAGCTCCAGGCTGCAGACGTGTAACGCCAACATCCAGAGGGAGCGTGCGGAGATCTGGGTGTTTTGTGACGTTATCCAGTCCGAGCAGGTGGGACGT

Function

NR:

description
uncharacterized protein FLJ26957-like

GO:

id name namespace
GO:0018130 heterocycle biosynthetic process biological_process
GO:0006351 transcription, DNA-templated biological_process
GO:0090304 nucleic acid metabolic process biological_process
GO:0097659 nucleic acid-templated transcription biological_process
GO:0006139 nucleobase-containing compound metabolic process biological_process
GO:0006725 cellular aromatic compound metabolic process biological_process
GO:1901360 organic cyclic compound metabolic process biological_process
GO:1901362 organic cyclic compound biosynthetic process biological_process
GO:0032774 RNA biosynthetic process biological_process
GO:0019438 aromatic compound biosynthetic process biological_process
GO:0034654 nucleobase-containing compound biosynthetic process biological_process
GO:0046483 heterocycle metabolic process biological_process

KEGG:

id description
ko03022 Basal transcription factors

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803724.1 True 1443 mRNA 0.48 3 15431708 15434935
XR_005639522.1 False 1134 transcript 0.53 4 15431708 15434443

Neighbor

gene id symbol gene type direction distance location
LOC120560841 ppp2cb,LOC100710281,LOC105920955,LOC101157601,LOC103131405 coding upstream 1126 15416456 ~ 15430582 (+)
mak16 mak16 coding upstream 125608 15298400 ~ 15306100 (+)
LOC120561495 NA coding upstream 133065 15298542 ~ 15298643 (+)
lrrc2 LOC102210414 coding upstream 179369 15242850 ~ 15252339 (+)
LOC120560530 NA coding upstream 450091 14979874 ~ 14981617 (+)
LOC120560844 LOC104935222,LOC101481450,LOC102294942,LOC106534038,LOC108245882,LOC100710015,LOC107386134 coding downstream 806 15435741 ~ 15467408 (+)
LOC120560525 NA coding downstream 73987 15508922 ~ 15520405 (+)
LOC120560850 LOC104965067,LOC101155523 coding downstream 123569 15558504 ~ 15562994 (+)
LOC120561471 NA coding downstream 170031 15604966 ~ 15612582 (+)
trnac-gca_19 NA coding downstream 182950 15617885 ~ 15617956 (+)
G61782 LOC106527778 non-coding upstream 55706 15374777 ~ 15376002 (+)
G61770 LOC103398011,LOC102234551,LOC103373450,LOC107386141,LOC106527788 non-coding upstream 117130 15306447 ~ 15314578 (+)
G61757 NA non-coding upstream 190266 15240416 ~ 15241442 (+)
G61754 NA non-coding upstream 206739 15224547 ~ 15224969 (+)
G61756 NA non-coding upstream 207243 15224114 ~ 15224465 (+)
G61867 NA non-coding downstream 97932 15532867 ~ 15572973 (+)
LOC120560847 NA non-coding downstream 104420 15539355 ~ 15539844 (+)
LOC120560848 NA non-coding downstream 105934 15540869 ~ 15545477 (+)
G61966 NA non-coding downstream 526666 15961601 ~ 16045838 (+)
G61968 NA non-coding downstream 600516 16035451 ~ 16056705 (+)
spinb spin1,LOC103373448,LOC108245887,LOC101477468,LOC100698355,LOC106527790 other upstream 79083 15249744 ~ 15352625 (+)
nudt18 nudt18,LOC104957221 other upstream 207693 15219137 ~ 15224015 (+)
G61535 LOC103368073 other upstream 348260 15078874 ~ 15083448 (+)
cntrl NA other upstream 451911 14928373 ~ 14979797 (+)
surf4l surf4,LOC103397973,LOC102307728,LOC100699423,LOC101479701,LOC101465012 other upstream 635765 14774513 ~ 14795943 (+)
LOC120560526 NA other downstream 83845 15518780 ~ 15532796 (+)
mctp1a mctp1,LOC102782783 other downstream 201863 15636798 ~ 15777141 (+)
fam172a fam172a,LOC102785942 other downstream 508763 15943698 ~ 16099484 (+)
LOC120560890 NA other downstream 1033375 16468310 ~ 16475905 (+)
LOC120560897 LOC105925468 other downstream 1097981 16532916 ~ 16534175 (+)

Expression


Co-expression Network