bcl2l16 (LOC103353844,LOC104923787,LOC108246437,LOC104963815)


Basic Information

Item Value
gene id bcl2l16
gene name LOC103353844,LOC104923787,LOC108246437,LOC104963815
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 12909814 ~ 12932999 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039803768.1
tacagacacacttcaCTGAGACCCCAACACTCGTTCACCTGCTGgctgtttcttttttatctgTGTATGGCGTATGGCGAAGAGGAGCATCCCTACATCGCCATGACAGACTGATGTGACTTAGAGAATGGCTTTGCTGCCTGGTACTGGAGCTGTTATCTGTGTCCTACTGACCATCCATCTTGGTGATTAGTGAAGTGGCAATTGGAGAAGACCATGTGTCAGTCGGAGGTGCCAGGGGCCAGACTGGGCCTGAATAGTCCTGACCCGCTGGTGAGAGAGGCTTTTCTGATGGCCCATGACTACATAGACTATGTAACCACAGGCGGGGCAGATGGCGCCATGGGTCCAGCTCCTACAGCCTGCACCACGGCCCTGCGCTACGCCGGAGACGAGCTCCTCACCCGCTTCCCCATCTTCTTCCGGCGCTGGCCTCGGGTCTTCCAGGACGTGACAGAGAACACGGCCTGCCCCACGCTCATGAGCATCCTGGATGAGCACTTCTTCCCACCAGTCCCTGGGGGGCGGCGCAGGGACCTGGCCTGGAGCGCCGTGCTATCGGTGTATGTGCTGGCTGGCCAGATGGCTCTACATTGCCATGAGAGGGGCATGCCGGGGGTCCTGCCACAGCTGAAGGAGTGTGTGGGGTCCTATGTGGAGAGGGTCATCTGCCCTGAGATACGAGACAAGGGAGGATGGAGTGGTTTTGTATCACGCTTTGGAGAGAAGCAGGGCTTGGAGGGCCAGGTGAAGAAAGGGTGCTGTTGGACACTGCTGGCATTGGCCATAGGCATCCTCACCTACTTCTTGTGGAAAAGAATAGCTTAGCCAACACTGCCACCTAGTGTCCACAACCAAAAAA
>XM_039803769.1
tacagacacacttcaCTGAGACCCCAACACTCGTTCACCTGCTGgctgtttcttttttatctgTGTATGGCGTATGGCGAAGAGGAGCATCCCTACATCGCCATGACAGACTGATGTGACTTAGAGAATGGCTTTGCTGCCTGGTACTGGAGCTGTTATCTGTGTCCTACTGACCATCCATCTTGGTGATTAGTGAAGTGGCAATTGGAGAAGACCATGTGTCAGTCGGAGGTGCCAGGGGCCAGACTGGGCCTGAATAGTCCTGACCCGCTGGTGAGAGAGGCTTTTCTGATGGCCCATGACTACATAGACTATGTAACCACAGGCGGGGCAGATGGCGCCATGGGTCCAGCTCCTACAGCCTGCACCACGGCCCTGCGCTACGCCGGAGACGAGCTCCTCACCCGCTTCCCCATCTTCTTCCGGCGCTGGCCTCGGGTCTTCCAGGACGTGACAGAGAACACGGCCTGCCCCACGCTCATGAGCATCCTGGATGAGCACTTCTTCCCACCAGTCCCTGGGGGGCGGCGCAGGGACCTGGCCTGGAGCGCCGTGCTATCGGTGTATGTGCTGGCTGGCCAGATGGCTCTACATTGCCATGAGAGGGGCATGCCGGGGGTCCTGCCACAGCTGAAGGAGTGTGTGGGGTCCTATGTGGAGAGGGTCATCTGCCCTGAGATACGAGACAAGGGAGGATGGGATATGATGAGCAACACAGTGGTGCAGTGTCTTTCGCCCCAATGTcagctgggattggctccagctTCCTGCAACCCTGTAAAGGATACTCAGGTGCACATAATGGATAGATGACGAGCAAATTGGCA

Function

NR:

description
uncharacterized protein LOC109877819 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039803768.1 True 862 mRNA 0.57 3 12909814 12920471
XM_039803769.1 False 827 mRNA 0.57 3 12909814 12932999

Neighbor

gene id symbol gene type direction distance location
si:dkey-90l8.3 LOC104923788,LOC103353846 coding upstream 44562 12860590 ~ 12865252 (+)
ccn1l2 LOC104943830 coding upstream 71907 12831272 ~ 12837907 (+)
fkbp15b NA coding upstream 115383 12752510 ~ 12794431 (+)
fgf17 fgf17,LOC100689794 coding upstream 161278 12740866 ~ 12748536 (+)
LOC120561040 NA coding upstream 408264 12474081 ~ 12501550 (+)
lhx2b lhx2 coding downstream 416142 13349141 ~ 13366210 (+)
adgrd2 NA coding downstream 634560 13567559 ~ 13646350 (+)
LOC120561313 olfml2a coding downstream 936683 13869682 ~ 13902649 (+)
LOC120559997 NA coding downstream 1012039 13945038 ~ 13961157 (+)
atad1a atad1,LOC101479261,LOC100705680,LOC104934768,LOC102292399,LOC106527948 coding downstream 1053232 13986231 ~ 14000271 (+)
G61091 NA non-coding upstream 227746 12679709 ~ 12682068 (+)
G61067 NA non-coding upstream 270954 12638608 ~ 12638860 (+)
G61053 NA non-coding upstream 300356 12609104 ~ 12609458 (+)
G61052 NA non-coding upstream 301757 12607644 ~ 12608057 (+)
G61050 NA non-coding upstream 305604 12603756 ~ 12604210 (+)
G61160 NA non-coding downstream 66460 12999459 ~ 12999887 (+)
G61192 NA non-coding downstream 248583 13181582 ~ 13182308 (+)
G61194 NA non-coding downstream 249620 13182619 ~ 13184450 (+)
G61232 NA non-coding downstream 491752 13424751 ~ 13424951 (+)
G61244 nr5a1,LOC101062876 non-coding downstream 714298 13647297 ~ 13651464 (+)
G60897 NA other upstream 983213 11926183 ~ 11926601 (+)
LOC120561144 NA other upstream 2157374 10748116 ~ 10752440 (+)
LOC120561142 NA other upstream 2162861 10726438 ~ 10746953 (+)
LOC120560959 golga7,LOC104937560,LOC106585131 other upstream 2928760 9926950 ~ 9981054 (+)
ppp3cca LOC104934810,LOC100705072,LOC105915415,LOC101486266,LOC102777092,LOC103366803,LOC102200614,LOC101072650,LOC106932221 other upstream 3854049 9017891 ~ 9055765 (+)
LOC120560904 crb2,LOC103353841,LOC106959700,LOC106929552 other downstream 199099 13132098 ~ 13180491 (+)
G61337 LOC100705941,LOC102292089,LOC108234925,LOC106529513,LOC104934772,LOC103365846 other downstream 1174484 14107483 ~ 14109546 (+)
G61338 htr7,LOC104934772,LOC101065316 other downstream 1208443 14141442 ~ 14142050 (+)
LOC120560400 tmem150a,LOC106585116 other downstream 1319257 14252256 ~ 14281771 (+)
G61383 NA other downstream 1350418 14283417 ~ 14283871 (+)

Expression


Co-expression Network