LOC120561040


Basic Information

Item Value
gene id LOC120561040
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 12474081 ~ 12501550 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804008.1
AAGCGACTACACCAAATATACTCTGCACGTCTGAGGTCTGAGCACACTTTGAAGCGCTAGCTAACTAACTTCGACTGGCTgcttttgagacattttattcCCTTTTTGCTTGAACAAAATGGCATCGTTCACCCGATACAGCACAAAAGAAGATACATCAGAGGAGGGGGAACTGGAAAGTGAAGACGATGGAGACTCAGGAGGAGAGAGTTTTCTCGCAGACGAAGAGGAATTTGTTCCAGATGAGGATTTTGATGATTACCAACAAGATGATGAAGAGCCTAGCACCTCTTCTGGAGGACAAGGTGGCAGCCCCCCTGGTGAAAAGTCTATCACCTCTGCTGCAGGACAAGATGCCAGCCCCCCTGCTGAAGAGCCTAGCACCTTACCTGCAGGAAAAGATGCCAGCCCCCCTGCTGAAGAGCCTAGCACCTCTCCTGCAGGAGAACATGTGAGGGCCGCTGCTGAAGATACTACCACCTCTGCTGCAGGACAAGATGCCAGCCTCTATGTTTCTACAGAAAGAGAGCAGCCCCCCCAGCATGGGAGAGCTCGTAGACGGACTAGACGACGATCTCCTTCTCCACCACACAGCAGGGCACAGGGATCCAGGTCCAAACGTGCACGACGATTATCAAGTGGCTGGACCAAAACCACATCCGGATCTCCTCGTAAGCCAAAACCAGTATACTCAGCCACTTCCTGGAAAACTGAGGAAGATCCTGATGTATGTCCAGAGCAAAGAAGGTTTGTCCCAGCAAGACCCCCCGGACATAAACTGAACCCGGACAAAACGTACACACCGATGGACCTTTTCAAACTGTTTTTCAGCAATGAAGCAGCTCTAACCATTTGTCATCACACAAATAAACAAGCTGCTAAAAACAttgcaaaaggaaaaaaatattcatgGACTAACATCACCATGGAGGAGTTTTTCAGGTATGTGGGACTGACTTTCTTTATAGCATTGGTGAAACTGAGTACGATCAGAGattactggaaaaaaaacacaatcttCAGTGTCCCATTTCCAGCCAATATCATGGTACGGGACAGGTATCAGGTGATATCTTGGAACATCCACATGAGTGATCCTGAGGAAGATGTTGAGAATGACAGAAAGAAAGGGACACCAGATCATGACCGCCTGTTTCGACTGAAGCCCCTCCTGGACACCATCAAAAATGCTTGCTTAGCATATTACCACCCCAGGCAGAACCTTGCGATTGACGAGAGGATGGTGGCGACAAAGGCCCATACTGGAATGACGCAACACATGAAAGCGAAGCCGATCAAGTGGGGTTTCAAGCTCTTTGTTTTGGCTGACAGCAGCAATGGCTACACTGTGGACTTTACTGTGTACACTGGAAAGTCACAGTTTGTCTCAGGCGTTGGACTTGCATATGACTCTGTGATGTCCCTGATGAACAAAGAATATCTGGGCAGTGGCTTTCATCTCTATGTGGAtaatttctacaccagtccaaaACTCTTCAAGGATCTGTTTAACCTGAATGTCGGAGCATGTGGCACATACAGAGGCAATAGAAAAGATGTTCCCCACACAGAATTGAATGTGCTGAAGAAAAATGCTCCTAGAGGCTCCATCAGGTGGATCCGTGAAGGCCCACTGGTTTTTGTGAAGTGGATGGACACACGTGAGGTCTCTATCTGCTCTACAATCCACCCGGCATTCTCTGGAAACACTGTGAAGAGGAGAGTCAAAACACGGGGTGGCGACTGGACCACCAAATGCTTTCCATGCCCAACACCTATCAGGGATTATAACAAGCACATGGGCGGTGTTGATATGTCTGACCAGCTGATACAGTATTACTCTGTACATCACAAGAGCATGCGCTGGTACCGGACCTTGTTCTTTCACTTCCTGGACATTGCAGCCACAAACAGCTACCTCCTCCACAAGGAGCTTTGCAGAGAGAAGCAGGAGGAACCCATGAGCCACAGGGACTTCCTGCAGGAGCTGACAGCCCAGTTGTGTGGTGTCACAGTTAAaacccctcctgcccagacacGCAGTAGCCACGTACCTGTAGCTATCGCTAAAATACTTGATGTAAGCAGGAAGGCCTCGTATGGACGCAGGCCCTGCGTAAACTGCAGACAGACCAGGAAGGCCAAACAGGCTACCCCCTGGAAGTGTAAGGAGTGTGATGTGGCCCTATGTGTCATTTCAGACAGGAACTGCTTTGAGGCATGGCACAGCTAACGTTTTGGACAAAAAGGAACTGGGACTTGACTAAAAGAATGTAAACAGTCTTTAATCTGTGTTTGCTACAATGTTGGTTTTTCCCCACTGATCACCAAGGCCctagtctggctcaacggatGTACATTGTGGTAGAGGTTTGGCAAACTAAAAAGTAGCCTAGATTGGGAACCTGTGCCATCACGGCACTAAATCCAACTTGTATTGCAGGCAGTGTTCGCCAGTAGCGTTACTAGTTTAACCTCTTCTCAATAGCGTCGCTGTTTTCTGAATCAAATAGCTTTTCATTAGCATAGCTCTGTTATTGATCAAGTAGCGCCGTAGCATCCACACAAGTTTGTACATTTCCCCAAGCTTTTCTGAAGCTCAAACACACTGGAgctatcttaaaataaaaataaaactgtgctGCCGATAAGGAAATGAGGTGCATTATTGCCACCATGTGATCTTGAATCACTACACTCTCATTATGGGCTCTCTCATTGCTCTCACTCAGGAGCGGCTGAGATAAGTGCGACACCTAGTGGTACATTTTGGAACACTGATCCAGTCCGGTGTTTGGCTTGATATCAAACCAGTATTAATTTTTTAACACCAGCCCTAATTGATCCTTCGCTAAGCCCCGCcctccttagttactgttgctacgcctGACAAGCTTTGGTGCCTGGCACGTCTATTATACTATGTATGCACCGGTGTCAGACATTCCCAAGGAGATAATTAGTAATTTTTGGCAAACAGGTGAAATATCTGAGAGAGCAAGACAAAGGGGACTGCAGTATGCATTCGAGGGATGTATCCATGACATAATATGCAACCGATTAGAGAATAATTTCATCAAAATTGAAGCTAAATCTATAGGTCATGCCTCATACGCTGACTATTCAAATGGAATCACACACATTGAGGAACAGCTATGTTCATGCACAGCAGGGGAAGTgaaatttgaaaataatctaataattATAAATCAAACAGCTTATCCATAAATCTTGTGGAATAAACACAAGACATTAGCCTGAACACTTTGCAATGATAACATTCTACTGCTTATATTTTTAGCGATTAACAAAATcctgaaatatattttaaagtatGTCAGTGAGCCTCAGTCTTGCCTTTAATCATTTTTAGGACAATTCCGGTTAACcgttaacatttagggaccctcattaggctaccgttgaagtgtggtgatattttgagccttttatTTGAGCCGATTTTTGTCTTTACTTTCCCTGTTtcccccgaatactagcgttgtaagctaatcagcagtccacgctagcttgtttcaagctacaaacacattagattagcatgaaaacatgtcccagagagcgatcgagtgggtacacatctgttatccCCTAGGTttattttgcgccggaattgtccttttattTTACGTTCAAATATATGCATTATGAACAAAGAACATAATTATTTCCAAGCAATGCTATGCTgagttaactagctagctaacattagcgtgTTCTTGCCTTGGAGCAAACGTACGTAGGTGTTTCTGTTAATCTTTTGACATTTAACTAGTTGTGAATGGGGCCTCCCACACTGCTTGATCCACGCCCGGCATTTCTCCCCTTGGGTTTTAGGTTTCgggaagggaaaaaattccaccacCCTGTCCAAACTTTTAGGATAACGGGTATCAGATTTGCACAATCCATACACACAACGCTTCGGCATGTTTCCCTCACTCGAACGCTTGACAGACCTCCCGCACCGAGTTATGGTTGTTAAGCCACCATTGGCCTGTGGCGGTTTTCGGGCGTGGAATAAAGCCCCGCCCAGGACagttgtgattgttttaaagaaataaacaacctgattgtttgtttgtttttccgaTCCCAGTATAGAtaggtggtgtagccagactttaCTACAGCACTGACACAGCGACGTAGATAGGTttgacaatgcgagactaccaagGCCTAGAAAAACAAATCTCAAAAGCCAAAAGTCTTGTTCACTATTGTTTtatgtatgatttttaaatgaatatctgtgatttaactttttattttgtcttcatGATCATATAACTATACACTCATGGGACAGCATACATATTCTGACAGCCcagtttttctttaaataaaatgtatataaccTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804008.1 True 4386 mRNA 0.45 3 12474081 12501550

Neighbor

gene id symbol gene type direction distance location
dpp7 dpp7 coding upstream 315383 12121425 ~ 12158698 (+)
LOC120561470 LOC107749966 coding upstream 625941 11837758 ~ 11848140 (+)
stxbp1b LOC103353854,LOC103141940,LOC100712335 coding upstream 683452 11728462 ~ 11790629 (+)
LOC120561249 fut7,LOC103353858 coding upstream 897727 11573980 ~ 11576354 (+)
ankrd34bb NA coding upstream 1196597 11275018 ~ 11277484 (+)
fgf17 fgf17,LOC100689794 coding downstream 239316 12740866 ~ 12748536 (+)
fkbp15b NA coding downstream 250960 12752510 ~ 12794431 (+)
ccn1l2 LOC104943830 coding downstream 329722 12831272 ~ 12837907 (+)
si:dkey-90l8.3 LOC104923788,LOC103353846 coding downstream 359040 12860590 ~ 12865252 (+)
bcl2l16 LOC103353844,LOC104923787,LOC108246437,LOC104963815 coding downstream 408264 12909814 ~ 12932999 (+)
G60901 NA non-coding upstream 485348 11988167 ~ 11988733 (+)
G60896 NA non-coding upstream 552692 11921031 ~ 11921389 (+)
G60894 NA non-coding upstream 567212 11906443 ~ 11906869 (+)
G60893 NA non-coding upstream 568167 11905646 ~ 11905914 (+)
G60892 NA non-coding upstream 574131 11899723 ~ 11899950 (+)
G61050 NA non-coding downstream 102206 12603756 ~ 12604210 (+)
G61052 NA non-coding downstream 106094 12607644 ~ 12608057 (+)
G61053 NA non-coding downstream 107554 12609104 ~ 12609458 (+)
G61067 NA non-coding downstream 137058 12638608 ~ 12638860 (+)
G61091 NA non-coding downstream 178159 12679709 ~ 12682068 (+)
G60897 NA other upstream 547480 11926183 ~ 11926601 (+)
LOC120561144 NA other upstream 1721641 10748116 ~ 10752440 (+)
LOC120561142 NA other upstream 1727128 10726438 ~ 10746953 (+)
LOC120560959 golga7,LOC104937560,LOC106585131 other upstream 2493027 9926950 ~ 9981054 (+)
ppp3cca LOC104934810,LOC100705072,LOC105915415,LOC101486266,LOC102777092,LOC103366803,LOC102200614,LOC101072650,LOC106932221 other upstream 3418316 9017891 ~ 9055765 (+)
G61139 tubb2b,tubb4b,LOC103024866,LOC101061694,LOC105901187 other downstream 419597 12921147 ~ 12923836 (+)
LOC120560904 crb2,LOC103353841,LOC106959700,LOC106929552 other downstream 630548 13132098 ~ 13180491 (+)
G61337 LOC100705941,LOC102292089,LOC108234925,LOC106529513,LOC104934772,LOC103365846 other downstream 1605933 14107483 ~ 14109546 (+)
G61338 htr7,LOC104934772,LOC101065316 other downstream 1639892 14141442 ~ 14142050 (+)
LOC120560400 tmem150a,LOC106585116 other downstream 1750706 14252256 ~ 14281771 (+)

Expression


Co-expression Network