piwil2 (piwil2)


Basic Information

Item Value
gene id piwil2
gene name piwil2
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 14147570 ~ 14188917 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804269.1
GATACCGTCTATCAACCACTTAAGTCCAGTATCAGGTGGATTCATTTAGTACAGACGTTAAGCGGCTCTGGTTAGGAATAATTGGACCCCTCGTGCCAGTCAACCCATTTTGTGTCAACTGGTTATAAAAAGAACTTGACCAAATGGATCAAAAGAAACCACCTGATCTTGGTAGTATGTCGAGCATGCCTTGGCTGGGACGCAGAGGAGGACTACAGCCTCAGGACCCAGCTGTAGGGCGCAGTAGAGGGCTGCTGCTCTCTCCCGAAGGGCCTAATATAGGACGAGCCAGAGGTTTCCCCACTCTTGGCGATACCCCACAAGGGCGGGGAGTAACTCTACCCATTACGGAACCAGTGGTTGGCCGAGCCAGAGGGCTGCTCTTCCCAGCAGCTGAACCAAAGGTAGGGGTGGCAGGAGGTGCAATCATGCCTAGCCTGGAGACGCAGCACAGACCGATGGCTCCACATGAAACCCAGACGCAGCACCAAACAGTAGAGACCTCTGCTTCAACAACAAAAGAGGTTGACCTGCCTACCTTTGGTCAAAGATCATCACTGGTCTCAATGTTCAGGGGAATGGGCATTGAGCCATCAATGACCTTGTGGGGAAGAGGAACACCACCAGTagGAAGAGGAGCAGCTGGAGATTTGGGTGATGCAAAGCTGCAAGACACCCCCGTAGGTGTCATCAGCAGCCCAGAAAGCTTCAGCCAACTTGAAGAGGTTATGGGCAGAGGCATCAGTTTCCATGGCCGAGGTTTGTCCCCTCAGACGATGGTAGGGCTTGGAAGAGCAGCGATGCCTCACCTTGGAATAGGAAGAGCACGCCTGCTACCTCTTTCTCCTGGTCATGTTGAGTCTGTTTCTGAAGCCTGTGAGCAACAAGCAGTCCTACACACTCGGACTCCCCCCTCAGGAACTGTGCCCCTGTTGCCCACCCCTCAAGAGGTGATTGAGCTTTCTGCTGTTGCACCAGCAAAGATGGAGCTGAAAATGGAGGCAGTCCGTGAGCCAACTAATAAGGCTGGAACAAAAGGAGCTCTTATAAATATTGGCTCAAACCACATCACGATTCGTTGCAAGAATGAAGCTGTTTATCAGTACCATGTTACATTCACtccaaatgttgaatCAATGGCAATGCGTTTTGGCATGATGAAAGATCACCGTTCAGCGACAGGGGAAGTAATAGCTTTCGATGGCTCTATACTCTTTCTGCCTGTTAAACTGAAAGACGTGGTTGTTCTCAAGAGTGTGAGACGAACCGATAACGaggaaatacaaatacaaatccaGATGACAAAGATTTTGCCACCTAACTCGGATCTATGCATTCCATTCTACAATGTGGTGCTCAGgagggTAATGAAAATCATCGGGCTGAAGCTGGTGGGTCGAAATCATTATGATCCAGAAAGCGCGGTCATTCTTGGAAAACATCGGCTGCAAGTGTGGCCAGGTTATTCAACCGGAATCAAGCGCGCAGATGGAGGCCTGTACCTGAATGTGGATGTGTCTCACAAAGTCCTGCGGAATGACTCTGTGCTGAATATCATGAACATGCTGTATCAACAGAGCAAAGAGAACTTCAGAGACGAATGCACCAAAGAGCTCATCGGCAGCATCGTCATCACCCGCTACAACAACCGCACCTACCGCATTGATGCCATTGAGTGGAACAAGTCACCCAAAGACACCTTCACTTTGATGGATGGCACAGAAACCACCTTTGTTGAATACTACAGcaagAACTATGGGATTACCATCAAAGAGATGGACCAACCTCTACTCATGCATCGGCCAAAGGAGAGGGCTAAGCCAGGAGGGAAGCAAATCATTACTGGAGAGATCCTTCTAGTACCAGAGCTTTCCTTCATGACAGGAATCCCAGACAAAATGAGGAAGGACTTCAGAGCTATGAAGGACCTGACCATGCACATCAACGTGAGCGGTGAGCAGCACACCCACTCAATAAAACAGCTTCTGAAGAACATCAGCACTAACCCTGAGAGTCAGATGGAGCTCAGCCGATGGGGACTGGACGTTGACTCAGAAATCCTGATGACTAAAGGTAGAATTCTTCCTCTAGAAACCATATGTCTACAGTCAACATCCTTTACCACTGGCACTGATGTTTCCTGGTCCAGAGAGGTTGTTAGGGATCCTTCAATCAGCTCTGTCACATTGAACACCTGGTCCATCTTCTACCCTCGCCGCTGTGCAGAGCAGGCTGAAGAGCTGGTTTCCATCTTCAACAAGGTGGCGGGACCTATTGGGTTTCGACTGCAGCGACCCATTCGTGTGGAGCTGAAGGATGATCGCACTGAGACTTACGTCAAGAGCATCCACTCTCAGCTGACCAGTGAGCCCAAGATGCAGCTCGTAGTGTGCATCCTGGTCGGCAACAGAGAAGATCTCTACAGTGCCATCAAGAAGCTCTGCTGTGTCAAAAGTCCCATACCATCCCAGGCCATCAATGTCCGCACCATATCCCAGCCACAGAAGTTAAGAAGTGTTGCCCAAAAGATACTCCTGCAGATAAACAGCAAGTTAGGAGGAGAGCTATGGACTGTCAATGTCCCTCTGAAACACTTGATGGTGGTGGGAGTTGATGTCCACCATGACACCAGCAAGGCACATCAATCAGTCATGGGCTTTGTCGCCAGTGTGAACAGTTCACTGACCCGCTGGTACTCCAGAGTAACTTTCCAGACACCCACTGAGGAACTGATCAATGGCTTCAGAGTTTGTTTACTGGCTGCACTGCAGAAGTACTACGAGGTGAACCATAACTTGCCAGAGAAGATCGTGGTGTATCGGGATGGTGTGTCAGATGGTCAGCTAAAGATGGTGGAGCAGTACGAGATCCCACAGTTGATCAAATGCTTTGAGACTTTCCCCAGCTACGAGCCCAAGCTGGTCTTCATTGTGGTCCAAAAGCGCATCAGCACCACCCTCTACTCATTTGCTGCAAACAACATTGGCACACCTCCACCTGGAACTGTTCTGGATCACACCCTTACTCAGCAAGACTGGAcggatttctttttaatggcacaTTCCATTCGCCAGGGCTGTGGAATTCCGACACACTACATCTCCCTGTACAACACGGCAAACCTCTCACCAGACCATTTGCAAAGGCTGACTTTCAAAATGTGCCATTTGTACTGGAACTGGCCGGGCACCATTCGTGTGCCAGCGCCATGCAAGTATGCCCACAAGCTGGCTTACCTGTCTGGACAGTACTTGCACTCCGAGCCGGCCATCCAGCTTTCAGACAAGCTATTCTTCCTTTGAGCTGAGCCGAACTACCACAAGTAAACTGCTCAGGTTACAGCAAAACCAGCTGTGATGAACAATTGCGCTGAATAACAAACGACTCATTTGAAATAATGAGAGATtcattattttataatattatgattattactgagtaggaaaagcacatgtGTGTTCAATAACGATAATGATTGCTGTATTACACTTAGCAGATGTCCTGGCTGTGCATGCTGGCTGAATGGAaaagcttactgggacacttgataaATCTGAGccatctttaatgttttaattcaaAGTGAAACTGTTGTGAGTTTGGCAAAGTTACTAATACTGGTTACAAAGTTTcacagtatttttcttttttttttagccactGTTCTTGTGGCAAAAGTATTTGTCAGGGTTTTGTTAATGTTAAGCCCTTCCTGTACTGCCCTTGCTGCGCATTTTGTTGCGCAAAGCTAAACAGCCAGGTAAAAGTCCTCCAATAAACACATGGCTTGTCTTGTACTCTA

Function

symbol description
piwil2 Enables piRNA binding activity. Involved in several processes, including gamete generation; germ-line stem cell population maintenance; and piRNA metabolic process. Acts upstream of or within negative regulation of SMAD protein complex assembly and positive regulation of gene expression. Located in P granule and nucleus. Is expressed in axis; blastoderm; blastodisc; pharyngeal arch 3-7; and reproductive system. Orthologous to human PIWIL2 (piwi like RNA-mediated gene silencing 2).

NR:

description
piwi-like protein 2

GO:

id name namespace
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K02156 AUB, PIWI; aubergine

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804269.1 True 3802 mRNA 0.48 24 14147570 14188917

Neighbor

gene id symbol gene type direction distance location
atad1a atad1,LOC101479261,LOC100705680,LOC104934768,LOC102292399,LOC106527948 coding upstream 147299 13986231 ~ 14000271 (+)
LOC120559997 NA coding upstream 186413 13945038 ~ 13961157 (+)
LOC120561313 olfml2a coding upstream 244921 13869682 ~ 13902649 (+)
adgrd2 NA coding upstream 501220 13567559 ~ 13646350 (+)
lhx2b lhx2 coding upstream 781360 13349141 ~ 13366210 (+)
LOC120560074 NA coding downstream 9838 14198755 ~ 14211704 (+)
LOC120560659 LOC103369208,LOC102291259,LOC102215744,LOC101478239 coding downstream 23322 14212239 ~ 14233388 (+)
idua idua coding downstream 45361 14234278 ~ 14246305 (+)
unc119.1 unc119b coding downstream 188337 14377254 ~ 14383227 (+)
msi1b msi1,LOC100704609 coding downstream 216223 14405140 ~ 14429432 (+)
G61332 NA non-coding upstream 86399 14060922 ~ 14061171 (+)
LOC120561318 NA non-coding upstream 242230 13904693 ~ 13905340 (+)
LOC120561317 NA non-coding upstream 242912 13903363 ~ 13904658 (+)
LOC120561319 NA non-coding upstream 322336 13812112 ~ 13825234 (+)
G61259 NA non-coding upstream 460658 13686631 ~ 13686912 (+)
G61376 NA non-coding downstream 73238 14262155 ~ 14262869 (+)
G61389 crybb3,LOC103469711 non-coding downstream 136473 14325390 ~ 14327533 (+)
G61391 NA non-coding downstream 139263 14328180 ~ 14329747 (+)
G61431 rnf10,LOC102784202 non-coding downstream 176315 14365232 ~ 14368488 (+)
G61448 NA non-coding downstream 212314 14401231 ~ 14401881 (+)
G61338 htr7,LOC104934772,LOC101065316 other upstream 5520 14141442 ~ 14142050 (+)
G61337 LOC100705941,LOC102292089,LOC108234925,LOC106529513,LOC104934772,LOC103365846 other upstream 38024 14107483 ~ 14109546 (+)
LOC120560904 crb2,LOC103353841,LOC106959700,LOC106929552 other upstream 967079 13132098 ~ 13180491 (+)
G61139 tubb2b,tubb4b,LOC103024866,LOC101061694,LOC105901187 other upstream 1223734 12921147 ~ 12923836 (+)
G60897 NA other upstream 2220969 11926183 ~ 11926601 (+)
LOC120560400 tmem150a,LOC106585116 other downstream 63339 14252256 ~ 14281771 (+)
G61383 NA other downstream 94500 14283417 ~ 14283871 (+)
G61390 crybb2,LOC108234953,LOC100703162 other downstream 128622 14317539 ~ 14319506 (+)
c6h12orf43 NA other downstream 200554 14389471 ~ 14392583 (+)
LOC120560925 NA other downstream 242413 14431330 ~ 14434597 (+)

Expression


Co-expression Network