oclnb (LOC104926565,LOC103397562)


Basic Information

Item Value
gene id oclnb
gene name LOC104926565,LOC103397562
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 11193487 ~ 11206112 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804537.1
GTTGACTGGGGAGTAGCCCACCACGTGATGAATACACACCTGTAGGCGCGCGTACTCATGCGGCCGCGCGCTCACTGTGTTTGCGTTCGTTACTGCTGTCTTCATCGGGATCAGGCTGTTCATCACACAAGTTGGATTTCAGTATGCCGAGCAAAAAACACAGGCCTTCTACGCACCAGTCAGGTGGTAGCAAACACCATAGCAGCAGACACAGGCACAGTGAGCTGATGTCCAACCCAGCCTTTTCCTACTACCCACGAGAGAAGATGCTTCACTTCTATAGTTGGACTTCACCACCTGGTGTGATGAAGATAATGtgtattatcatcatcatcatgtgtgtggctgtgtttgcctgtgtggcTGCCACATTGTCCTGGGACTACGATATGAGCCTCATGGGTCTGGGAGGTGGAGCTGGCTTAATGCCAGGTTATGGCGGCTCTTATGGTGGCTCTTATGGCGGCTCTTATGGTGGCAGCTCATATGGAGGCGGCTCTGGCATTGGCGGATCTTATGGCTATGGAGAAACACAAATGGATCCCAAAGCTGGCAAAGCCTTCATCATCGCCATCTCTGGCATTACCTTCATAGCTGTGCTCATCATATTTGTGTTGGTTGTTTCGAGGCAAACTACTGCCCGCTCATCAAAGTTCTACCTAGCAACCATCATCATCTGTGCCATTTTGGCATTTCTGATGATCATCGCCACTATTGTCTACCTGGTGGCAGTGAACCCAACAGCCCAGTCCACGGGGTCTGTCTACTACAGCCAGATCATCCAACTGTGTGCCCAgtaccagaaccagaaccaggccCAGGGCATCTTCCTCAACCAGTACCTCTACCATTACTGTGTGGTGGATCCTGAAGAGGCCATAGCTATCGTCCTCAGCTTCCTGGTGTTTATTGCCCTCATTATCCTGCTGGTGTTTGCAGTCAAGACTCGCTCTGCGATCAGGCGCTGGGGCCGGGATCGCATTCTCTGGGAGCAAGTGCCGGCAGTCAATAATGGTCTACACAACAGTGTCGGGGAGTggGTAAAAAACGTGTCTGGTGATCCAGAGGTGCTGGTGAATGACCACAATCCCAAAGTCAGGGGGTCAAGAGAGTATCTGGACGAGCTGGATCACAACAAGCCTCTTTACCTCCCAGGAGACTCAGACATCAGCAGTTCGGTGGGAGTCCTAAAGCCCAGGCTGAAGGACTATGACACTGGTGTGGAGTCTGGAAACGacctggaggaggaggacttCTCTGTTTTGTTTCCTTCCATTGTGGATGAGCAAGAGCGTCTGATCTACAAACAGGAATTTGACCGGGATCACCAGGAATACAAGAGCCTGCAGGCTGAGCTGGACAGCATAAACCAGGACCTGGCTGGCCTGGACAGAGAGCTGCACCAACACCCTGAGGGCAGTCCACAGTTCCTGGATGCCATGCATGAATACACCAGACTGAAGAATCTTAAGAAGTCCCCAGACTACCAGATTAAGAAGAAGAGGTGTAAATATCTGAGGTCCAAACTGTCACACATCAAGAGAAAGATCAGTGAATATGACCGCCGGCCTTAAACCTTCGCCTCTGACCGCCTTATGCAGGgaacaaatgcagagacaaaTTAGCAACGC
>XM_039804538.1
TCATGCGGCCGCGCGCTCACTGTGTTTGCGTTCGTTACTGCTGTCTTCATCGGGATCAGGCTGTTCATCACACAAGTTCCAGTTGGATTTCAGTATGCCGAGCAAAAAACACAGGCCTTCTACGCACCAGTCAGGTGGTAGCAAACACCATAGCAGCAGACACAGGCACAGTGAGCTGATGTCCAACCCAGCCTTTTCCTACTACCCACGAGAGAAGATGCTTCACTTCTATAGTTGGACTTCACCACCTGGTGTGATGAAGATAATGtgtattatcatcatcatcatgtgtgtggctgtgtttgcctgtgtggcTGCCACATTGTCCTGGGACTACGATATGAGCCTCATGGGTCTGGGAGGTGGAGCTGGCTTAATGCCAGGTTATGGCGGCTCTTATGGTGGCTCTTATGGCGGCTCTTATGGTGGCAGCTCATATGGAGGCGGCTCTGGCATTGGCGGATCTTATGGCTATGGAGAAACACAAATGGATCCCAAAGCTGGCAAAGCCTTCATCATCGCCATCTCTGGCATTACCTTCATAGCTGTGCTCATCATATTTGTGTTGGTTGTTTCGAGGCAAACTACTGCCCGCTCATCAAAGTTCTACCTAGCAACCATCATCATCTGTGCCATTTTGGCATTTCTGATGATCATCGCCACTATTGTCTACCTGGTGGCAGTGAACCCAACAGCCCAGTCCACGGGGTCTGTCTACTACAGCCAGATCATCCAACTGTGTGCCCAgtaccagaaccagaaccaggccCAGGGCATCTTCCTCAACCAGTACCTCTACCATTACTGTGTGGTGGATCCTGAAGAGGCCATAGCTATCGTCCTCAGCTTCCTGGTGTTTATTGCCCTCATTATCCTGCTGGTGTTTGCAGTCAAGACTCGCTCTGCGATCAGGCGCTGGGGCCGGGATCGCATTCTCTGGGAGCAAGTGCCGGCAGTCAATAATGGTCTACACAACAGTGTCGGGGAGTggGTAAAAAACGTGTCTGGTGATCCAGAGGTGCTGGTGAATGACCACAATCCCAAAGTCAGGGGGTCAAGAGAGTATCTGGACGAGCTGGATCACAACAAGCCTCTTTACCTCCCAGGAGACTCAGACATCAGCAGTTCGGTGGGAGTCCTAAAGCCCAGGCTGAAGGACTATGACACTGGTGTGGAGTCTGGAAACGacctggaggaggaggacttCTCTGTTTTGTTTCCTTCCATTGTGGATGAGCAAGAGCGTCTGATCTACAAACAGGAATTTGACCGGGATCACCAGGAATACAAGAGCCTGCAGGCTGAGCTGGACAGCATAAACCAGGACCTGGCTGGCCTGGACAGAGAGCTGCACCAACACCCTGAGGGCAGTCCACAGTTCCTGGATGCCATGCATGAATACACCAGACTGAAGAATCTTAAGAAGTCCCCAGACTACCAGATTAAGAAGAAGAGGTGTAAATATCTGAGGTCCAAACTGTCACACATCAAGAGAAAGATCAGTGAATATGACCGCCGGCCTTAAACCTTCGCCTCTGACCGCCTTATGCAGGgaacaaatgcagagacaaaTTAGCAACGC

Function

NR:

description
occludin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804537.1 True 1631 mRNA 0.51 9 11193487 11206112
XM_039804538.1 False 1582 mRNA 0.51 9 11193542 11206112

Neighbor

gene id symbol gene type direction distance location
marveld2b LOC104926564,LOC103371582,LOC102788930,LOC102293847,LOC101466532 coding upstream 5276 11173019 ~ 11188211 (+)
LOC120560494 NA coding upstream 1817741 9368199 ~ 9375746 (+)
tcima LOC104938922,LOC102777577,LOC103152810,LOC103353800,LOC101487124,LOC102217691 coding upstream 2058907 9133547 ~ 9134580 (+)
LOC120560490 abcb9 coding upstream 2204124 8972286 ~ 8989363 (+)
LOC120560802 abcb9,LOC106965289 coding upstream 2228381 8939829 ~ 8965106 (+)
gtf2h2 LOC100696048,LOC102788170,LOC101466805,LOC102292669,LOC102204724 coding downstream 12839 11218951 ~ 11231887 (+)
ankrd34bb NA coding downstream 68906 11275018 ~ 11277484 (+)
LOC120561249 fut7,LOC103353858 coding downstream 367868 11573980 ~ 11576354 (+)
stxbp1b LOC103353854,LOC103141940,LOC100712335 coding downstream 522350 11728462 ~ 11790629 (+)
LOC120561470 LOC107749966 coding downstream 631646 11837758 ~ 11848140 (+)
G60698 NA non-coding upstream 35253 11157934 ~ 11158234 (+)
G60682 NA non-coding upstream 73443 11119777 ~ 11120044 (+)
G60620 NA non-coding upstream 287858 10902061 ~ 10905629 (+)
G60607 NA non-coding upstream 340581 10812779 ~ 10852906 (+)
G60722 NA non-coding downstream 4553 11210665 ~ 11223962 (+)
G60723 NA non-coding downstream 5476 11211588 ~ 11214100 (+)
G60730 NA non-coding downstream 28235 11234347 ~ 11234580 (+)
G60780 NA non-coding downstream 282254 11488366 ~ 11544659 (+)
LOC120561253 NA non-coding downstream 321937 11528049 ~ 11528755 (+)
LOC120561144 NA other upstream 441047 10748116 ~ 10752440 (+)
LOC120561142 NA other upstream 446534 10726438 ~ 10746953 (+)
LOC120560959 golga7,LOC104937560,LOC106585131 other upstream 1212433 9926950 ~ 9981054 (+)
ppp3cca LOC104934810,LOC100705072,LOC105915415,LOC101486266,LOC102777092,LOC103366803,LOC102200614,LOC101072650,LOC106932221 other upstream 2137722 9017891 ~ 9055765 (+)
vps37ba vps37b,vps37c,LOC102776795 other upstream 2178584 8991441 ~ 9014903 (+)
G60897 NA other downstream 720071 11926183 ~ 11926601 (+)
G61139 tubb2b,tubb4b,LOC103024866,LOC101061694,LOC105901187 other downstream 1715035 12921147 ~ 12923836 (+)
LOC120560904 crb2,LOC103353841,LOC106959700,LOC106929552 other downstream 1925986 13132098 ~ 13180491 (+)
G61337 LOC100705941,LOC102292089,LOC108234925,LOC106529513,LOC104934772,LOC103365846 other downstream 2901371 14107483 ~ 14109546 (+)
G61338 htr7,LOC104934772,LOC101065316 other downstream 2935330 14141442 ~ 14142050 (+)

Expression


Co-expression Network