LOC120561471


Basic Information

Item Value
gene id LOC120561471
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 15604966 ~ 15612582 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039804631.1
ATAATCAGCGTTAATCAGCATCACTTTCTTCACGTGTGTTAATCTTCAAATACTGCCGGGGACGTGCGCGCCTGCTAGGCCTACTACCCAGTTTCCTCGTTTTTTTCCAGCTATTCAAATGCAGTGTCAAACTTACACACTgcggacagaaagagagaagtcGAGGCCAATAGACGACCACAAAAGTCGAGCAGTTAAACCTGGACTCCAGGAGGGCCTCTCTGTGTGAGAAAACCGGCCTAATGATGATGCAGTGTGGGATGAGAGGGGGCATCAATCACCGGTGATTTTTAACGATTGAGTTTTGAGGCTGTGCCAGGAGCATCTTCATCATCCTCCATGTCTGATGCCTCCAGTTCCTGCTGACCGCTGACAGCTCAACATCCTCCATCTGTTCTTCTGCTTGGAGCTtcactctcttcttctttcactCAATCCTTTCTCCATCCGTCTGTCTATCCACCGGTCATGAATCCCTACAGACACACAAGTCCACCTCCTGACCCTTATGATAATTCCCAAAATCCATCTCTGTCAGCCACCGTACCGTCTCCTCCGCTCATCCAGACAGGTCATAGCTCTGTGACAGTTTTGAGCCAGAACGTGCCTCACTATCTGGCCTCCTCAGACCACGATGGAGGAAACCTGGTCCCATCACCAAACTTGGACCGCTCCGCCTCATTGCTTCCAGGGTCCAGCCTAGTTTCAGTCTCGTCTTTGGCTCAAAGTCCATCTCCAGCTCCCACTCTGAACCCTTACCCTGCCCCCGGCACCCCCCCCTCCTGCCAGGTCTCCGTCATCGTCCCGTCCCCAGACCTCCGCCCGTCTCCCCTGCCGTCTCAGTGCTCCGAGGACACCTGCCCGGACCTGGAGTGCTCAATCTGCTTCAGCCAGTTCAACAACGTCTTCCGCTGTCCCAAGATGCTTCAGTGCAAGCACACCTTCTGCCTGGAGTGCCTGGCACGCATCAACGTCAAGTCGGCCGAGCCAAACTCCATCCAGTGCCCGCTGTGCCGCGGCCTCACGCCCCTGCCCACCCTCGGCCTGCCCAGACTGGCCACAAACTCAGACATGCTGTCCTGCCTGCCGGCCGCCATGCAGAGAGTCTACAGCATCCGCTTCCTGCGCAACAAAGGGAAGCTGCAGGTCAAAAGGTCATCTGAAGGTCAGAGGTCGCTGACATCTCTCAGGTCGATAAACCGTACTCTGGACGTGGGGCTACCCAGCCCGCCTGCCGGGAGCCGCGGCGCCGAAGCGGTCGGCATGGGCGGAGCTCTGTTCCGCCTGACGGGCCGGCCGGCGTGCCGGGCCTTCCTCCTGACGTccgtggtgatgatgatggtgcTGCTGACGGGCATCATCATCTTCCTCCTCACatacaaaagtgaaaaaagtgggTGACATCACATTTCTTCCTCctgctttttattttcagtgGTGGAAAAGGTCACCGAACAGTAGAATTCCGCCATCTGAAATGGAATAAAAAGCCATCGTTTCTGGCTTTTTAACGCTCCAAAGCCAAAAGGACACAAACCTCAACACTCAACTCATGAGCTGAGAAAGTGAGAAGCATAAAGACTTTCCACTCGTAGATTTTATTGTTCAGTCCTTAAAATTGACTCCCAGAATTCAGCTGAGGTTGAAAGGTGTGGTATCTGAGACTGAGAAGCAGTTGCCTTTAATCTGttttacagtgcttaacttgtGCCAAAAGCTTTAAATGATTTGCTAAATGTAGCTGGACATGAGAACCTTCTGCCTAAAGCAACACAATGGCAGTCATGTAACAGCCGAGTTGGAAAGGTGGGAAGCAGTGGCCTTTAATCTTACTTACAGCCCTTACACCCTCAACCTTCGATTACTTTAGGTTTTGGGGGAAAACACACACGATCACCACTTTTTAACGTCTTGAATTTCGTTGAACAAAATGGCTGATCTGATAGTCAAGTCATGGCAGAGAAGATGAGAAATGTAGACGTGCTGTATTATACCGATTGATCGCAGGTTTATTATATTACAAGGTCAAAGTCTCTGGTGGCTCCCATCCAGCTGCAGATAGGTCTAAAATAAACTTTGGACTCCAGGGACTGGAATCTAATTTCACTGTCACTTTGGGACATAAAACACTATTAAATAACAAgtaacgagaaaaaaaaaacaatattacatAAAGCTGTCTCCAGGTGGTGCCACCTTCTTCATATTTAAACTCCTTTTGGCAGCTTTCAGCACTTTAAAGAGAGCCTAGTGACTGAATTGTTACCTGTTAGTTTCTGTGTTGTTCCGTCTTTCTAAGTGGCTGTTATTTACATGAGTCTATTTCCTCCTGTCACTCCTCTGCCCCTCGTAACCAAATGCTGTAAACAGGAACCATGCAAATAAACCGGATTCAGTTACAGTCTGACACAGAGAGCACAGGCTTTCCATAGATGCTGGAACATTATACATGATGGAACTGAATATAGCTGGATAGTGTAACCGAATAGTTGACGCAAATTACAGAAATATTTTTCCACTTCACCTCTAGAGCGGTCTCTCCAATTCGGatagtatttgtttttattcgTCCAGGTTTTCAGATCATTTCTGCCTCCACATTGACACAATGCAGGATGATGGGATTCCATTTGAGGTGCTAAAAGCATCAGAATGCCTTCCCAtaattttagttttcacaatttaAAAAGGTGTCCTTGTAAAACTTTTGTTCCTGTTGATTATCCACAGTAATGGGGACCTTCTGTTGCAGTTTGattcttctttttaaatgtactttctCAAGACTGCAAGCACCACAAAATAAATCCCATCATCCTCAATGTCATTGATGTGGAGGCAGAAATCTGAAAACCTGGACGAATAAAACCAAAACTGTCTGCATGTATTTTGTAGtagtgacttaaaaaaaaaaaaaaaaaaaaggggtaaaGGAGCAAAAAGGTGTCTGTGGTTGAAAGCATGAGGCAGTCATGTACCTGAAGTTTTAAATATTGGGTCAGTATGCCTGTGTTCCGACCTGCAGGAGGCTGTGAGATGTGGGACAGTCCCTGGTCATGTTTTAACTGACCAATCAACAGATCAGTGACCATCAGTTCGCCGCTGAAAATGAAAGGACAGCCCACAAGGAAAACCTTTCCCACAAATTCTTTGACTTGCAAATCAAATGTGTCGTCCCAAAATAACTCATCCATTTACAAAAGCTTATTTACATTTAATGTTTCCATTTTTCAGCCTGCATCCAAGAGGGAAAATGGGTTTTAATCCAATGTTTATCTTCCGGTTTTTGGTCGGTTTctcctgttttgtgtttttaggcTCTGACCTTGTTTTACTgtgcaatgtaaaataaattattttatatatttatgactGTTTTAGCAAAGCTTGCTCTATCACTGTTTGCCTTGTGTTGAACTTAAATAAATTCCTTTTTGaattatg

Function

GO: NA

KEGG:

id description
ko00590 Arachidonic acid metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039804631.1 True 3444 mRNA 0.46 3 15604966 15612582

Neighbor

gene id symbol gene type direction distance location
LOC120560850 LOC104965067,LOC101155523 coding upstream 41972 15558504 ~ 15562994 (+)
LOC120560525 NA coding upstream 84561 15508922 ~ 15520405 (+)
LOC120560844 LOC104935222,LOC101481450,LOC102294942,LOC106534038,LOC108245882,LOC100710015,LOC107386134 coding upstream 137558 15435741 ~ 15467408 (+)
LOC120560841 ppp2cb,LOC100710281,LOC105920955,LOC101157601,LOC103131405 coding upstream 174384 15416456 ~ 15430582 (+)
mak16 mak16 coding upstream 298866 15298400 ~ 15306100 (+)
trnac-gca_19 NA coding downstream 5303 15617885 ~ 15617956 (+)
trnac-gca_20 NA coding downstream 6162 15618744 ~ 15618815 (+)
trnac-gca_21 NA coding downstream 6491 15619073 ~ 15619144 (+)
kiaa0825 kiaa0825 coding downstream 199103 15811685 ~ 15938853 (+)
LOC120561380 NA coding downstream 848656 16461238 ~ 16467976 (+)
G61867 NA non-coding upstream 31993 15532867 ~ 15572973 (+)
LOC120560848 NA non-coding upstream 59489 15540869 ~ 15545477 (+)
LOC120560847 NA non-coding upstream 65122 15539355 ~ 15539844 (+)
G61782 LOC106527778 non-coding upstream 228964 15374777 ~ 15376002 (+)
G61770 LOC103398011,LOC102234551,LOC103373450,LOC107386141,LOC106527788 non-coding upstream 290388 15306447 ~ 15314578 (+)
G61966 NA non-coding downstream 349019 15961601 ~ 16045838 (+)
G61968 NA non-coding downstream 422869 16035451 ~ 16056705 (+)
G61970 NA non-coding downstream 435801 16048383 ~ 16050693 (+)
G61975 NA non-coding downstream 510618 16123200 ~ 16198871 (+)
LOC120560394 NA non-coding downstream 522012 16134594 ~ 16142799 (+)
LOC120560526 NA other upstream 72170 15518780 ~ 15532796 (+)
zgc:101664 NA other upstream 170031 15431708 ~ 15434935 (+)
spinb spin1,LOC103373448,LOC108245887,LOC101477468,LOC100698355,LOC106527790 other upstream 252341 15249744 ~ 15352625 (+)
nudt18 nudt18,LOC104957221 other upstream 380951 15219137 ~ 15224015 (+)
G61535 LOC103368073 other upstream 521518 15078874 ~ 15083448 (+)
mctp1a mctp1,LOC102782783 other downstream 24216 15636798 ~ 15777141 (+)
fam172a fam172a,LOC102785942 other downstream 331116 15943698 ~ 16099484 (+)
LOC120560890 NA other downstream 855728 16468310 ~ 16475905 (+)
LOC120560897 LOC105925468 other downstream 920334 16532916 ~ 16534175 (+)
LOC120560947 edil3 other downstream 1673066 17285648 ~ 17414595 (+)

Expression


Co-expression Network