LOC120560300


Basic Information

Item Value
gene id LOC120560300
gene name NA
gene type non-coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053117.1
NCBI id CM020914.1
chromosome length 43979800
location 23219850 ~ 23245368 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XR_005639470.1
TAGATGCTTCATCACAGAACTAGAAGTGAGGAGGAGAGCGTGGACACCCCGGTCATAAAGCACTATTGGGAGCACGCCTATTTATAGCTGACTaccgccaccaccaccaccctgcAGGCTGAAAGTCACACCAGGAGATTTTGGGAGTGAAGTCCTTGAGCTACTCTGTCAATGCGAAGCATTGCAGTGACAAGTTTGCAGATGAGGTTGGTCACTGTGAAGACGCACTGCACCGTTCCCTACGCTAAAGCACAAGACTACATCCTTCAAAGACAAATAACTGAAACATTTGCCAAGAGCCCTGCCTACTCCATGAATGAGGAAAAAGACACTGGAAAAGAAGGAAGGGTAACAGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005639470.1 True 357 lncRNA 0.48 3 23219850 23245368

Neighbor

gene id symbol gene type direction distance location
elac1 elac1 coding upstream 328831 22884588 ~ 22891019 (+)
me2 me2 coding upstream 335976 22862584 ~ 22883874 (+)
mapk4 mapk4 coding upstream 357977 22840502 ~ 22861873 (+)
tspan36 LOC104956296 coding upstream 384780 22826626 ~ 22835070 (+)
smarcad1a smarcad1 coding upstream 408458 22791538 ~ 22811392 (+)
ndufaf2 ndufaf2 coding downstream 11893 23257261 ~ 23273702 (+)
LOC120560302 zswim6 coding downstream 37711 23283079 ~ 23330548 (+)
LOC120561043 NA coding downstream 107582 23352950 ~ 23354264 (+)
dock8 dock8 coding downstream 162848 23408216 ~ 23487506 (+)
ercc6l2 ercc6l2,LOC105014104 coding downstream 459034 23704402 ~ 23722529 (+)
G63914 NA non-coding upstream 231810 22987181 ~ 22988040 (+)
G63872 NA non-coding upstream 313884 22904035 ~ 22905966 (+)
G63792 NA non-coding upstream 1069726 22131884 ~ 22150124 (+)
G63715 NA non-coding upstream 1344163 21875445 ~ 21875687 (+)
G63714 NA non-coding upstream 1374712 21844832 ~ 21845138 (+)
G63976 smim15,LOC106580593,LOC103398561 non-coding downstream 29552 23274920 ~ 23281109 (+)
G64026 NA non-coding downstream 185322 23430690 ~ 23432473 (+)
LOC120560908 NA non-coding downstream 186113 23431481 ~ 23443313 (+)
G64127 NA non-coding downstream 489456 23734824 ~ 23735293 (+)
G64130 NA non-coding downstream 499571 23744939 ~ 23749835 (+)
G63905 NA other upstream 289645 22929899 ~ 22930205 (+)
LOC120560787 NA other upstream 1620561 21588876 ~ 21599289 (+)
G63480 rbm19 other upstream 2541934 20676417 ~ 20677916 (+)
wdr31 wdr31,LOC102796061 other upstream 2729264 20473651 ~ 20490586 (+)
vps13a vps13a other upstream 2777757 20400947 ~ 20442093 (+)
LOC120560905 clg12h9orf3,LOC103358904,LOC102294417,LOC101470200,LOC102214270 other downstream 242599 23487967 ~ 23562285 (+)
G64108 NA other downstream 447294 23692662 ~ 23693291 (+)
prxl2c aaed1 other downstream 1575946 24821314 ~ 24823066 (+)
cdc14b cdc14b,LOC102776968,LOC103141798,LOC106948523 other downstream 1578350 24823718 ~ 24837448 (+)
LOC120561182 LOC104948667,LOC104930137,LOC103397628,LOC103366370,LOC107092578,LOC102226292,LOC106956829,LOC106919698,LOC103470079,LOC103141747 other downstream 2439596 25684964 ~ 25696576 (+)

Expression


Co-expression Network