G276159


Basic Information

Item Value
gene id G276159
gene name NA
gene type unknown
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047612.1
NCBI id CM018558.1
chromosome length 23372418
location 3705810 ~ 3709250 (+)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU327267
aaaaggttgtagcacagcagctatgctcatacttacataggaataacattcatgaaatgtatcagtcaggatttaggcctcatcatagcacagagacagcactggtaaaagttgtaaatgacttactactggcctctgatcagggttgtgtctccttgctggtgctgcttgaccttagtgcagcttttgataccattgatcatgctattctccctcaatagactagaaaatgtagtaggcattaagggaacagccctttcctggctcaggtcttatttgactgatcgttatcagtttgtaaacataaatggtgacttctcttctcatgctaaggtaaagtttggtgttccgcaaggctctgttttaggcccactgctcttttctttatatatgctacctctgggcaaaattattcgtaagcatggtattagcttccactgttacgctgatgacacacagttgtatgtttcagcaaagccagatgacagacaccagcttaataaagttgaggaatgtgtaaaagacattagaaactggatgcttattaactttctcttacttaattctgacaagacagaagtacttgtactaggaccacatgcag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU327267 True 604 TUCP 0.40 2 3705810 3709250

Neighbor

gene id symbol gene type direction distance location
acss3 acss3,LOC107755903,LOC107694183,LOC107590709 coding upstream 163060 3501997 ~ 3542750 (+)
myf5 myf5 coding upstream 282248 3418836 ~ 3423562 (+)
myf6 myf6 coding upstream 291989 3393160 ~ 3413821 (+)
syt1a syt1,LOC107694178,LOC107755909,LOC107590640 coding upstream 504593 2966599 ~ 3201217 (+)
nav3 nav3 coding upstream 761172 2837590 ~ 2944638 (+)
llph NA coding downstream 25042 3734292 ~ 3736671 (+)
guca1a guca1a,LOC107590762,LOC107755893,LOC102788764 coding downstream 79329 3788579 ~ 3793136 (+)
lhfpl3 lhfpl3,LOC107680022 coding downstream 105631 3814881 ~ 3849222 (+)
sema3c sema3c,LOC106576426,LOC107694195 coding downstream 263822 3973072 ~ 4041095 (+)
nup107 nup107,LOC107710680,LOC107590859 coding downstream 565320 4274570 ~ 4295308 (+)
LOC117599596 NA non-coding upstream 147934 3554223 ~ 3557876 (+)
G275767 NA non-coding upstream 156707 3548734 ~ 3549103 (+)
G275734 NA non-coding upstream 277555 3428042 ~ 3428255 (+)
G275730 NA non-coding upstream 289977 3415614 ~ 3415833 (+)
G275727 NA non-coding upstream 331123 3374469 ~ 3374687 (+)
G276179 LOC108279640 non-coding downstream 59042 3768292 ~ 3773536 (+)
G276184 NA non-coding downstream 83412 3792662 ~ 3857918 (+)
G276205 NA non-coding downstream 99257 3808507 ~ 3878508 (+)
G276208 NA non-coding downstream 120514 3829764 ~ 3830444 (+)
G276242 NA non-coding downstream 269324 3978574 ~ 3979491 (+)
G275657 NA other upstream 399976 3257654 ~ 3305834 (+)
LOC113525606 LOC108279477,LOC108261384,LOC108261705,LOC108261423,LOC108261687,LOC108261555,LOC108262265,LOC108261932,LOC108261610 other upstream 1060421 2633602 ~ 2645389 (+)
G275365 LOC108261611,LOC108261384,LOC108279477,LOC108262118,LOC108261400,LOC108261705,LOC108261423,LOC108262466,LOC108261687 other upstream 1072816 2632436 ~ 2632994 (+)
LOC117599502 LOC108261705,LOC108279477,LOC108261610,LOC108261932,LOC108261423,LOC108261555,LOC108261515,LOC108262337,LOC108261554 other upstream 1352132 2170002 ~ 2353678 (+)
LOC117599546 NA other downstream 72960 3782210 ~ 3785627 (+)
ndufb2 ndufb2 other downstream 204374 3913624 ~ 3988660 (+)
gnai1 gnai1,LOC108279833,LOC107590838,LOC100706147,LOC103382723,LOC106609493 other downstream 349311 4058561 ~ 4156084 (+)
magi2a LOC108279726 other downstream 415470 4124720 ~ 4270478 (+)
mdm2 mdm2,LOC107577534,LOC107694202,LOC107692244,LOC107590969,LOC107710681,LOC107737846 other downstream 605922 4315172 ~ 4329746 (+)

Expression


Co-expression Network