G74815 (LOC106958509,LOC105896829,LOC106963510,LOC107690788,LOC107723971)


Basic Information

Item Value
gene id G74815
gene name LOC106958509,LOC105896829,LOC106963510,LOC107690788,LOC107723971
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 18934 ~ 32039 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU88708
cacacacacacagcacgagAAACAGCTCTTTTTCTGGATGTTTGGGTGGCTCTTAAAAGAGCCGTTGTGTTCGCGTCGTTCGGTGTTGGAGCGTTTAACCGCCGAAGCCGTACAGGGTGCGTCGTTCGGTGTTGGAGCGTTTAACCGCCGAAGCCGTACAGGGTGCGTCCCTGGCGTTTCAGGGCATACACCACATCCATGGCGGTGACCGTCTTCCTCTTGGCATGCTCGGTGTAGGTGACGGCGTCGCGGATCACGTTCTCCAGGAACACCTTCAGCACACCGCGAGTCTCTTCGTAGATCAGACCGGAAATACGCTTAACACCGCCACGGCGAGCCAGACGGCGAATAGCCGGCTTGGTGATTCCCTGGATGTTATCGCGAAGAACTTTACGGTGACGCTTGGCGCCTCCTTTGCCAAGCCCCTTTCCGCCCTTGCCTCTGCCAGACATGATGCTGCTCTCTCGAAGTCAAGCTGCT
>TU88709
cacacacacacagcacgagAAACAGCTCTTTTTCTGGATGTTTGGGTGGCTCTTAAAAGAGCCGTTGTGTTCGCGTCGTTCGGTGTTGGAGCGTTTAACCGCCGAAGCCGTACAGGGTGCGTCCCTGGCGTTTCAGGGCATACACCACATCCATGGCGGTGACCGTCTTCCTCTTGGCATGCTCGGTGTAGGTGACGGCGTACACCACATCCATGGCGGTGACCGTCTTCCTCTTGGCATGCTCGGTGTAGGTGACGGCGTCGCGGATCACGTTCTCCAGGAACACCTTCAGCACACCGCGAGTCTCTTCGTAGATCAGACCGGAAATACGCTTAACACCGCCACGGCGAGCCAGACGGCGAATAGCCGGCTTGGTGATTCCCTGGATGTTATCGCGAAGAACTTTACGGTGACGCTTGGCGCCTCCTTTGCCAAGCCCCTTTCCGCCCTTGCCTCTGCCAGACATGATGCTGCTCTCTCGAAGTCAAGCTGCT

Function

NR:

description
PREDICTED: transcriptional regulatory protein AlgP-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88708 False 480 lncRNA 0.57 2 18934 32039
TU88709 True 494 TUCP 0.57 2 18934 32039

Neighbor

gene id symbol gene type direction distance location
LOC113524322 LOC108266876 coding upstream 18267 50306 ~ 129763 (-)
LOC113524326 LOC108266219,LOC108266218,LOC108266898 coding upstream 64143 96182 ~ 106080 (-)
LOC113524368 NA coding upstream 80140 112179 ~ 125540 (-)
LOC113524367 LOC108266218 coding upstream 104795 136834 ~ 156279 (-)
LOC117597326 LOC108266219,LOC108266898,LOC108266218,LOC108266876,LOC108258194 coding upstream 106899 138938 ~ 141293 (-)
G74822 NA non-coding upstream 3011 35050 ~ 35443 (-)
G74827 NA non-coding upstream 12445 44484 ~ 45869 (-)
G75037 NA non-coding upstream 30759 62798 ~ 63288 (-)
LOC117597330 NA non-coding upstream 51831 83870 ~ 85921 (-)
G75183 NA non-coding upstream 384698 416737 ~ 417747 (-)
G74824 LOC108263794,LOC108263798 other upstream 11692 43731 ~ 44346 (-)
G75076 NA other upstream 130175 162214 ~ 162577 (-)
nms pdcl3,nms other upstream 162992 195031 ~ 201012 (-)
LOC113524562 LOC108270747,LOC108273219,LOC108273545,LOC108261257,LOC108274210,LOC108270753 other upstream 291424 323463 ~ 330490 (-)
LOC113524348 LOC108266920 other upstream 340528 372567 ~ 374644 (-)

Expression


Co-expression Network