G74822


Basic Information

Item Value
gene id G74822
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 35050 ~ 35443 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU88739
ccgttttgaagtactctgtgctgctataagcctattttgaagtacatcgtgctgctataagcccattttgaagtactctgtgctgctataagcccgttttgaagtactctgtgcggctataggcctattttgaagtacatcgtgctgctataagcccattttgaagtactctgtgcggctataagcctattttgaagtacatcgtgctgctataagcctattttgaagtactctgtgctgctataagcccgttttgaagtactctgtgctgctataagcctattttgaagtactctgtgcggCTATAGGCccgttttgaagtactctgcgctgctataggcctattttgaagtacatcgtgctgctataagcccgttttgaagtactctgtgct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU88739 True 394 lncRNA 0.43 1 35050 35443

Neighbor

gene id symbol gene type direction distance location
LOC113524322 LOC108266876 coding upstream 14863 50306 ~ 129763 (-)
LOC113524326 LOC108266219,LOC108266218,LOC108266898 coding upstream 60739 96182 ~ 106080 (-)
LOC113524368 NA coding upstream 76736 112179 ~ 125540 (-)
LOC113524367 LOC108266218 coding upstream 101391 136834 ~ 156279 (-)
LOC117597326 LOC108266219,LOC108266898,LOC108266218,LOC108266876,LOC108258194 coding upstream 103495 138938 ~ 141293 (-)
G74818 h2afx,LOC106534936,LOC107386469,LOC104950138,LOC106516344,LOC106527800,LOC100693699,LOC105929328,LOC107677420 non-coding downstream 8154 13659 ~ 26896 (-)
G74820 LOC108261568,LOC108441237,LOC108415981,LOC108435734,LOC108412211,LOC106024139,LOC108414221,LOC108261485,LOC108261826,LOC108262582 non-coding downstream 9258 12445 ~ 25792 (-)
G74827 NA non-coding upstream 9041 44484 ~ 45869 (-)
G75037 NA non-coding upstream 27355 62798 ~ 63288 (-)
LOC117597330 NA non-coding upstream 48427 83870 ~ 85921 (-)
G75183 NA non-coding upstream 381294 416737 ~ 417747 (-)
G75195 NA non-coding upstream 396076 431519 ~ 434836 (-)
G74815 LOC106958509,LOC105896829,LOC106963510,LOC107690788,LOC107723971 other downstream 3011 18934 ~ 32039 (-)
G74824 LOC108263794,LOC108263798 other upstream 8288 43731 ~ 44346 (-)
G75076 NA other upstream 126771 162214 ~ 162577 (-)
nms pdcl3,nms other upstream 159588 195031 ~ 201012 (-)
LOC113524562 LOC108270747,LOC108273219,LOC108273545,LOC108261257,LOC108274210,LOC108270753 other upstream 288020 323463 ~ 330490 (-)
LOC113524348 LOC108266920 other upstream 337124 372567 ~ 374644 (-)

Expression


Co-expression Network