G75183


Basic Information

Item Value
gene id G75183
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 416737 ~ 417747 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU89152
CTTCACAGCATCCAGGACTCCCTTCTGCTTAAAACTGCGGTACAGCCGCTGTCTCAGCTCctctgcactcacacactgctcctCGTCCTCGGCAGACATCCTCACGctcagctctctcacacacacacacacactcacgctcacacacacacacactcaggtctcacacacactctctcagtctcacttcacacacacacacacacacacacacacacg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89152 True 219 lncRNA 0.55 2 416737 417747

Neighbor

gene id symbol gene type direction distance location
trappc2 trappc2 coding downstream 679 412573 ~ 416058 (-)
LOC113524317 LOC108273544 coding downstream 62132 322246 ~ 354605 (-)
edar edar coding downstream 159291 232575 ~ 257446 (-)
LOC113524366 LOC108261406,LOC108270753 coding downstream 242378 164750 ~ 174359 (-)
LOC113524367 LOC108266218 coding downstream 260458 136834 ~ 156279 (-)
gpm6bb gpm6b,LOC108414227,LOC105898107,LOC103023481,LOC100694635 coding upstream 15540 433287 ~ 458683 (-)
fancb fancb coding upstream 72733 490480 ~ 501207 (-)
arsh LOC108266883 coding upstream 257772 675519 ~ 685478 (-)
LOC113524316 LOC108272333 coding upstream 302880 720627 ~ 724412 (-)
tlr7 tlr7,LOC108266215 coding upstream 307764 725511 ~ 729048 (-)
LOC117597330 NA non-coding downstream 330816 83870 ~ 85921 (-)
G75037 NA non-coding downstream 353449 62798 ~ 63288 (-)
G74827 NA non-coding downstream 370868 44484 ~ 45869 (-)
G74822 NA non-coding downstream 381294 35050 ~ 35443 (-)
G74818 h2afx,LOC106534936,LOC107386469,LOC104950138,LOC106516344,LOC106527800,LOC100693699,LOC105929328,LOC107677420 non-coding downstream 389841 13659 ~ 26896 (-)
G75195 NA non-coding upstream 13772 431519 ~ 434836 (-)
G75201 NA non-coding upstream 63321 481068 ~ 481964 (-)
G75240 NA non-coding upstream 143606 561353 ~ 561963 (-)
G75332 NA non-coding upstream 212697 630444 ~ 701572 (-)
LOC117597328 NA non-coding upstream 235406 653153 ~ 660719 (-)
LOC113524348 LOC108266920 other downstream 42093 372567 ~ 374644 (-)
LOC113524562 LOC108270747,LOC108273219,LOC108273545,LOC108261257,LOC108274210,LOC108270753 other downstream 86247 323463 ~ 330490 (-)
nms pdcl3,nms other downstream 215725 195031 ~ 201012 (-)
G75076 NA other downstream 254160 162214 ~ 162577 (-)
G74824 LOC108263794,LOC108263798 other downstream 372391 43731 ~ 44346 (-)
tmsb4x NA other upstream 273333 691080 ~ 719115 (-)
frmpd4 frmpd4 other upstream 311845 729592 ~ 765991 (-)
sox21b LOC108266914,LOC108440504,LOC107722114,LOC107674003,LOC107558380 other upstream 440657 858404 ~ 864607 (-)
LOC113524338 LOC108266882,LOC108266876,LOC108266218,LOC108258194 other upstream 502149 919896 ~ 936968 (-)
LOC113524372 NA other upstream 520265 938012 ~ 938203 (-)

Expression


Co-expression Network