G75365


Basic Information

Item Value
gene id G75365
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 760352 ~ 760838 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU89386
cacaaagctccgccccccaaAACATGgcaactagagttagcatgctaagcactgtcatgacatcactttcaagctcATTTGCCTGCTTGAAAGCTGAGTtataacactgtaaacacacgaAATTTCAGCTCATACTCTTTTATGAGAACGGTCAAGAGTGTTTTCActgtcctgttttgtttttaatgagatCTAGCATCGTTAGCATTTTAAGCTACACAATAGGAAATTCAGTTGCTTGTAAACCAAATTATAACAATATCAACAGCAAAGTGACgttgctgttttttctttctttgtaattaaataaaatgtatcgACTCGATCCATTATGTAAAGCCGGCTAATCGAATGATTCAAAGCTTTATAGAGATTGTGTTTACAAGCCTGTCCAGGAGCAACATCGCTAATTCTGCATCCAGCTTCAGCCCCATCGCCAGTAATAAATTGCTCCATTATGGAAAAATGCTGCCAGggtttattctgg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89386 True 487 lncRNA 0.39 1 760352 760838

Neighbor

gene id symbol gene type direction distance location
tlr7 tlr7,LOC108266215 coding downstream 31304 725511 ~ 729048 (-)
LOC113524316 LOC108272333 coding downstream 35940 720627 ~ 724412 (-)
arsh LOC108266883 coding downstream 74874 675519 ~ 685478 (-)
fancb fancb coding downstream 259145 490480 ~ 501207 (-)
gpm6bb gpm6b,LOC108414227,LOC105898107,LOC103023481,LOC100694635 coding downstream 301669 433287 ~ 458683 (-)
dct dct coding upstream 66443 827281 ~ 833892 (-)
LOC113524324 LOC108266872,LOC108260750 coding upstream 183481 944319 ~ 957738 (-)
LOC113524329 NA coding upstream 342202 1103040 ~ 1112551 (-)
trnas-uga_4 NA coding upstream 469471 1230309 ~ 1230390 (-)
trnal-cag_10 NA coding upstream 469749 1230587 ~ 1230669 (-)
G75356 NA non-coding downstream 39746 719505 ~ 720606 (-)
G75332 NA non-coding downstream 58780 630444 ~ 701572 (-)
LOC113524353 NA non-coding downstream 98261 660906 ~ 662091 (-)
LOC117597328 NA non-coding downstream 99633 653153 ~ 660719 (-)
G75240 NA non-coding downstream 198389 561353 ~ 561963 (-)
G75369 NA non-coding upstream 3457 764295 ~ 764555 (-)
G75372 NA non-coding upstream 6523 767361 ~ 772430 (-)
G75348 NA non-coding upstream 35984 796822 ~ 892057 (-)
G75429 NA non-coding upstream 167021 927859 ~ 928966 (-)
G75428 NA non-coding upstream 168309 929147 ~ 929357 (-)
tmsb4x NA other downstream 41237 691080 ~ 719115 (-)
LOC113524348 LOC108266920 other downstream 385708 372567 ~ 374644 (-)
LOC113524562 LOC108270747,LOC108273219,LOC108273545,LOC108261257,LOC108274210,LOC108270753 other downstream 429862 323463 ~ 330490 (-)
nms pdcl3,nms other downstream 559340 195031 ~ 201012 (-)
G75076 NA other downstream 597775 162214 ~ 162577 (-)
sox21b LOC108266914,LOC108440504,LOC107722114,LOC107674003,LOC107558380 other upstream 97566 858404 ~ 864607 (-)
LOC113524338 LOC108266882,LOC108266876,LOC108266218,LOC108258194 other upstream 159058 919896 ~ 936968 (-)
LOC113524372 NA other upstream 177174 938012 ~ 938203 (-)
rpl31 rpl31,LOC102795706,LOC106575914,LOC107740715 other upstream 384459 1145297 ~ 1159338 (-)
lcp1 lcp1,LOC108439517,LOC107740717,LOC107660271,LOC107732195 other upstream 409871 1170709 ~ 1187499 (-)

Expression


Co-expression Network