G75428


Basic Information

Item Value
gene id G75428
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 929147 ~ 929357 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU89459
ggtaatgttaatgctacagcatacaaaggcattttagacatttatatgcttccacctttgtggcaacaggttGAGTATGGCCCTGGTCAGGAAAGGCCATGGTTAGATGAGTTTGGTATGgaggaactccagtggcctgcacagagccctaacctcaaaccccactgaacaactttgggatgaattagaaggctgttatagctgcaaaagg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89459 True 211 lncRNA 0.45 1 929147 929357

Neighbor

gene id symbol gene type direction distance location
dct dct coding downstream 95255 827281 ~ 833892 (-)
tlr7 tlr7,LOC108266215 coding downstream 200099 725511 ~ 729048 (-)
LOC113524316 LOC108272333 coding downstream 204735 720627 ~ 724412 (-)
arsh LOC108266883 coding downstream 243669 675519 ~ 685478 (-)
fancb fancb coding downstream 427940 490480 ~ 501207 (-)
LOC113524324 LOC108266872,LOC108260750 coding upstream 14962 944319 ~ 957738 (-)
LOC113524329 NA coding upstream 173683 1103040 ~ 1112551 (-)
trnas-uga_4 NA coding upstream 300952 1230309 ~ 1230390 (-)
trnal-cag_10 NA coding upstream 301230 1230587 ~ 1230669 (-)
trnaw-cca NA coding upstream 323566 1252923 ~ 1252994 (-)
G75429 NA non-coding downstream 181 927859 ~ 928966 (-)
G75348 NA non-coding downstream 37090 796822 ~ 892057 (-)
G75372 NA non-coding downstream 156717 767361 ~ 772430 (-)
G75369 NA non-coding downstream 164592 764295 ~ 764555 (-)
G75365 NA non-coding downstream 168309 760352 ~ 760838 (-)
G75599 NA non-coding upstream 150566 1079923 ~ 1080355 (-)
G75600 NA non-coding upstream 151850 1081207 ~ 1081406 (-)
G75628 NA non-coding upstream 206269 1135626 ~ 1140203 (-)
G75640 NA non-coding upstream 240102 1169459 ~ 1169693 (-)
G75636 NA non-coding upstream 280028 1209385 ~ 1215704 (-)
sox21b LOC108266914,LOC108440504,LOC107722114,LOC107674003,LOC107558380 other downstream 64540 858404 ~ 864607 (-)
frmpd4 frmpd4 other downstream 163156 729592 ~ 765991 (-)
tmsb4x NA other downstream 210032 691080 ~ 719115 (-)
LOC113524348 LOC108266920 other downstream 554503 372567 ~ 374644 (-)
LOC113524562 LOC108270747,LOC108273219,LOC108273545,LOC108261257,LOC108274210,LOC108270753 other downstream 598657 323463 ~ 330490 (-)
LOC113524372 NA other upstream 8655 938012 ~ 938203 (-)
rpl31 rpl31,LOC102795706,LOC106575914,LOC107740715 other upstream 215940 1145297 ~ 1159338 (-)
lcp1 lcp1,LOC108439517,LOC107740717,LOC107660271,LOC107732195 other upstream 241352 1170709 ~ 1187499 (-)
trnat-agu_4 NA other upstream 518834 1448191 ~ 1448264 (-)
trnak-uuu_2 NA other upstream 542132 1471489 ~ 1471561 (-)

Expression


Co-expression Network