G75727


Basic Information

Item Value
gene id G75727
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 1384858 ~ 1385522 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU89826
atcatatagctcattattatataactcgtgatcatatagctcattattatataactcgtgatcatatagctcattattatataactcattatcatacagctcattattatataactcgtgatcatatagctcattattatataactcattatcatatagctcattattatataactcgtgatcatatagctcattattatataactcattatcatatagctcattattatataactcgtgatcatatagctcattattatataactcgtgatcatatagctcattattatatagcTCGTGATCAtacagctcattattatataactcgtgatcatacagctcattattatataactcattatcatatagctcattattatataactcatgatcat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89826 True 395 lncRNA 0.25 2 1384858 1385522

Neighbor

gene id symbol gene type direction distance location
rubcnl rubcnl coding downstream 45636 1320263 ~ 1339222 (-)
dhrs12 dhrs12,LOC107685263,LOC107723690,LOC106511784 coding downstream 69525 1306954 ~ 1315333 (-)
trnal-caa_2 NA coding downstream 70432 1314314 ~ 1314426 (-)
trnan-guu_16 NA coding downstream 89088 1295696 ~ 1295770 (-)
trnat-agu_2 NA coding downstream 90914 1293871 ~ 1293944 (-)
esd esd,LOC107675365,LOC107601075,LOC107709410 coding upstream 11162 1396684 ~ 1404791 (-)
trnaw-cca_4 NA coding upstream 29146 1414668 ~ 1414739 (-)
si:dkey-230p4.1 LOC108271988 coding upstream 144303 1529825 ~ 1552435 (-)
LOC113524666 LOC108271633 coding upstream 169420 1554942 ~ 1566787 (-)
trnal-caa_7 NA coding upstream 183223 1568745 ~ 1568857 (-)
G75719 NA non-coding downstream 7669 1375386 ~ 1377189 (-)
G75713 NA non-coding downstream 17792 1366382 ~ 1367066 (-)
G75687 NA non-coding downstream 78505 1305989 ~ 1306353 (-)
G75663 NA non-coding downstream 130762 1237221 ~ 1254096 (-)
G75636 NA non-coding downstream 169154 1209385 ~ 1215704 (-)
G75732 NA non-coding upstream 7257 1392779 ~ 1395138 (-)
G75734 NA non-coding upstream 10775 1396297 ~ 1396522 (-)
G75736 NA non-coding upstream 28320 1413842 ~ 1414177 (-)
G75737 NA non-coding upstream 47500 1433022 ~ 1433227 (-)
G75739 NA non-coding upstream 69477 1454999 ~ 1455287 (-)
lcp1 lcp1,LOC108439517,LOC107740717,LOC107660271,LOC107732195 other downstream 197359 1170709 ~ 1187499 (-)
rpl31 rpl31,LOC102795706,LOC106575914,LOC107740715 other downstream 225520 1145297 ~ 1159338 (-)
LOC113524372 NA other downstream 446655 938012 ~ 938203 (-)
LOC113524338 LOC108266882,LOC108266876,LOC108266218,LOC108258194 other downstream 447890 919896 ~ 936968 (-)
sox21b LOC108266914,LOC108440504,LOC107722114,LOC107674003,LOC107558380 other downstream 520251 858404 ~ 864607 (-)
trnat-agu_4 NA other upstream 62669 1448191 ~ 1448264 (-)
trnak-uuu_2 NA other upstream 85967 1471489 ~ 1471561 (-)
G75770 NA other upstream 143548 1529070 ~ 1529513 (-)
htr2aa NA other upstream 206433 1591955 ~ 1596479 (-)
trnat-agu_6 NA other upstream 252863 1638385 ~ 1638458 (-)

Expression


Co-expression Network