G75739


Basic Information

Item Value
gene id G75739
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 1454999 ~ 1455287 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU89840
cccttgattcttaatactgtgttgttacctgaatgatccacagctgtgtttttttgtttactgatagttgttcaagagtcccttgtttgtcctgaacagttaaactgcctgctgttcttcagaaaaatccttcaggtcccacaaattctttggttttccagcatttttgtgtatttgaaccctttccaacaatgactatGATTTtcagatccatcttttcacactgaggacaactgagggactcatatgcaactattacagaaggttcaaacgctcacagatgctccag

Function

GO:

id name namespace
GO:0051186 obsolete cofactor metabolic process biological_process
GO:0051188 obsolete cofactor biosynthetic process biological_process
GO:0006732 obsolete coenzyme metabolic process biological_process
GO:0009117 nucleotide metabolic process biological_process
GO:0006733 obsolete oxidoreduction coenzyme metabolic process biological_process
GO:0019362 pyridine nucleotide metabolic process biological_process
GO:0006753 nucleoside phosphate metabolic process biological_process
GO:0072524 pyridine-containing compound metabolic process biological_process
GO:0046496 nicotinamide nucleotide metabolic process biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU89840 True 289 lncRNA 0.39 1 1454999 1455287

Neighbor

gene id symbol gene type direction distance location
trnaw-cca_4 NA coding downstream 40260 1414668 ~ 1414739 (-)
esd esd,LOC107675365,LOC107601075,LOC107709410 coding downstream 50208 1396684 ~ 1404791 (-)
rubcnl rubcnl coding downstream 115777 1320263 ~ 1339222 (-)
dhrs12 dhrs12,LOC107685263,LOC107723690,LOC106511784 coding downstream 139666 1306954 ~ 1315333 (-)
si:dkey-230p4.1 LOC108271988 coding upstream 74538 1529825 ~ 1552435 (-)
LOC113524666 LOC108271633 coding upstream 99655 1554942 ~ 1566787 (-)
trnal-caa_7 NA coding upstream 113458 1568745 ~ 1568857 (-)
med4 med4,LOC107673119,LOC107709409,LOC107724027 coding upstream 160613 1615900 ~ 1624049 (-)
mlphb LOC108261129 coding upstream 267970 1723257 ~ 1747031 (-)
G75737 NA non-coding downstream 21772 1433022 ~ 1433227 (-)
G75736 NA non-coding downstream 40822 1413842 ~ 1414177 (-)
G75734 NA non-coding downstream 58477 1396297 ~ 1396522 (-)
G75732 NA non-coding downstream 59861 1392779 ~ 1395138 (-)
G75727 NA non-coding downstream 69477 1384858 ~ 1385522 (-)
G75740 NA non-coding upstream 12375 1467662 ~ 1467899 (-)
G75814 NA non-coding upstream 201086 1656373 ~ 1656848 (-)
G75875 NA non-coding upstream 267294 1722581 ~ 1722799 (-)
G75889 col6a3,LOC108262369 non-coding upstream 345985 1801272 ~ 1819183 (-)
G75880 NA non-coding upstream 393950 1849237 ~ 1873669 (-)
trnat-agu_4 NA other downstream 6735 1448191 ~ 1448264 (-)
lcp1 lcp1,LOC108439517,LOC107740717,LOC107660271,LOC107732195 other downstream 267500 1170709 ~ 1187499 (-)
rpl31 rpl31,LOC102795706,LOC106575914,LOC107740715 other downstream 295661 1145297 ~ 1159338 (-)
LOC113524372 NA other downstream 516796 938012 ~ 938203 (-)
LOC113524338 LOC108266882,LOC108266876,LOC108266218,LOC108258194 other downstream 518031 919896 ~ 936968 (-)
trnak-uuu_2 NA other upstream 16202 1471489 ~ 1471561 (-)
G75770 NA other upstream 73783 1529070 ~ 1529513 (-)
htr2aa NA other upstream 136668 1591955 ~ 1596479 (-)
trnat-agu_6 NA other upstream 183098 1638385 ~ 1638458 (-)
trnar-ucu_5 NA other upstream 183476 1638763 ~ 1638852 (-)

Expression


Co-expression Network