htr2aa


Basic Information

Item Value
gene id htr2aa
gene name NA
gene type misc
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 1591955 ~ 1596479 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU89924
GTGACTCCACTATCTGCCACGacgacatcatcagtggacttCATAATGTTTTTGTGTGGGTTGGATACCTGTCGTCAGCCGTGAACCCACTGGTCTACACTCTTTTCAATAAAACGTATCGTTCTGCCTTTGCTAGATATGTAAGATGTCAGtatagagaggagagaaaacCCCTGAGGCTCATCCTGGTCAACACCATCCCCC
>XM_026911019.2
AGCATGGAATCCTTTCCGCTCAGCAACCTGTCGAATCTGGAGGCAGGGTTTTGTGTGGGACTGGAGCTGGAACTGGGGCAGAAGAAGAACTGGGCAGCACTGTTGATCATGTTAATTGTGGTCATCACCATCACCGGGAACATTCTTGTCATTATGGCAGTCACATTGGAGCGGAAATTGCAGAATGCCACCAACTACTTTCTCATGTCACTGGCGATAGCTGACATGCTATTGGGCATCCTCGTCATGCCCATCTCCATGGTGACCATCTTGTATGGTTACTCGTGGCCACTTCCGAacatcctgtgcccactgtggATCTACCTCGACGTGCTGCTGTCCACAGCATCCATCATGCATCTGTGTGCTATCTCGGTAGATCGCTATATTGCTATCCGCAATCCGATAGCCCACAGCCGCGCCAAGTCCGCTTGGCGTGTCCGTGCCAAGATAACTGCTGTCTGGACCATTTCTGCCAGTATCTCCATGCCCATCCCAGTCCTAGGCCTCCATGACCACACCAAAGTGTTCAAAGAAGGGAGCTGCTTCCTGACAGACAGCTCATTTGTGCTCATCGGCTCCTTCATGGCCTTCTTCATGCCATTGACCATCATGGTGGTAACATACTTCCTGACCATAAGTGCCCTCCAGAGCGAGGCCACACTCTGCCTGGATCGGTTGGTGCCACGCCCCAGGTTTAGCGGTAGTTTGGCACTGGGCTTCCTCCCTTATGAGAAGAAGCTGTTTCTGCGGCGCTCATTGACCCTCAGCAATGAACAGAAGGCATCTAAAGTCCTGGGCGTTGTCTTTATCCTTTTTGTCATCATGTGGTGCCCATTTTTTGTTACGAATATCTTGGTGGCTGTGTGTGACTCCACTATCTGCCACGacgacatcatcagtggacttCATAATGTTTTTGTGTGGGTTGGATACCTGTCGTCAGCCGTGAACCCACTGGTCTACACTCTTTTCAATAAAACGTATCGTTCTGCCTTTGCTAGATATGTAAGATGTCAGtatagagaggagagaaaacCCCTGAGGCTCATCCTGGTCAACACCATCCCCCCGTTGGTCTACCAGTCAGCACTAGCTGAGGCTCTGGGAGATTTCTCTTCACCACTTACAAGTAAAAAGCCACAACCTTGTAAAAGAATCACTGAGGAAAGTGTTAGTTGTGTGTGA

Function

NR:

description
5-hydroxytryptamine receptor 2A-like

GO: NA

KEGG:

id description
K04157 HTR2; 5-hydroxytryptamine receptor 2

RNA

RNA id representative length rna type GC content exon number start site end site
TU89924 False 204 lncRNA 0.47 1 1592071 1592274
XM_026911019.2 True 1188 mRNA 0.50 3 1591955 1596479

Neighbor

gene id symbol gene type direction distance location
trnal-caa_7 NA coding downstream 23098 1568745 ~ 1568857 (-)
LOC113524666 LOC108271633 coding downstream 25168 1554942 ~ 1566787 (-)
si:dkey-230p4.1 LOC108271988 coding downstream 39520 1529825 ~ 1552435 (-)
trnaw-cca_4 NA coding downstream 177216 1414668 ~ 1414739 (-)
esd esd,LOC107675365,LOC107601075,LOC107709410 coding downstream 187164 1396684 ~ 1404791 (-)
med4 med4,LOC107673119,LOC107709409,LOC107724027 coding upstream 19421 1615900 ~ 1624049 (-)
mlphb LOC108261129 coding upstream 126778 1723257 ~ 1747031 (-)
cops8 cops8,LOC106581673,LOC107725246,LOC107723689,LOC107685920 coding upstream 261783 1858262 ~ 1871493 (-)
trim63b trim63b,LOC100194566,LOC100505419 coding upstream 265674 1862153 ~ 1863790 (-)
ranbp2 LOC108261082,LOC108440489 coding upstream 353653 1950132 ~ 1986039 (-)
G75740 NA non-coding downstream 124056 1467662 ~ 1467899 (-)
G75739 NA non-coding downstream 136668 1454999 ~ 1455287 (-)
G75737 NA non-coding downstream 158728 1433022 ~ 1433227 (-)
G75736 NA non-coding downstream 177778 1413842 ~ 1414177 (-)
G75734 NA non-coding downstream 195433 1396297 ~ 1396522 (-)
G75814 NA non-coding upstream 59894 1656373 ~ 1656848 (-)
G75875 NA non-coding upstream 126102 1722581 ~ 1722799 (-)
G75889 col6a3,LOC108262369 non-coding upstream 204793 1801272 ~ 1819183 (-)
G75880 NA non-coding upstream 252758 1849237 ~ 1873669 (-)
G75925 NA non-coding upstream 314717 1911196 ~ 1917438 (-)
G75770 NA other downstream 62442 1529070 ~ 1529513 (-)
trnak-uuu_2 NA other downstream 120394 1471489 ~ 1471561 (-)
trnat-agu_4 NA other downstream 143691 1448191 ~ 1448264 (-)
lcp1 lcp1,LOC108439517,LOC107740717,LOC107660271,LOC107732195 other downstream 404456 1170709 ~ 1187499 (-)
rpl31 rpl31,LOC102795706,LOC106575914,LOC107740715 other downstream 432617 1145297 ~ 1159338 (-)
trnat-agu_6 NA other upstream 41906 1638385 ~ 1638458 (-)
trnar-ucu_5 NA other upstream 42284 1638763 ~ 1638852 (-)
trnat-agu_7 NA other upstream 53574 1650053 ~ 1650126 (-)
trnar-ucu_6 NA other upstream 66041 1662520 ~ 1662609 (-)
trnat-agu_8 NA other upstream 77633 1674112 ~ 1674185 (-)

Expression


Co-expression Network