G75875


Basic Information

Item Value
gene id G75875
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 1722581 ~ 1722799 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU90012
CAGACTGGTTCGAGGTGagaggaaggctatggtaactcaaataactacactttttttacaattttgtgAGCAGAAAAATCATCACAAAAGGCACAACACATTCCTGTTCCACtcagaacaggaatctgaggctacaatgggcaGAGCTTCACAGAAACTGCACAgtttgaagattggaaaaacattgcctggtctggTCTGCCaggttttgagtttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90012 True 219 lncRNA 0.42 1 1722581 1722799

Neighbor

gene id symbol gene type direction distance location
med4 med4,LOC107673119,LOC107709409,LOC107724027 coding downstream 98532 1615900 ~ 1624049 (-)
trnal-caa_7 NA coding downstream 153724 1568745 ~ 1568857 (-)
LOC113524666 LOC108271633 coding downstream 155794 1554942 ~ 1566787 (-)
si:dkey-230p4.1 LOC108271988 coding downstream 170146 1529825 ~ 1552435 (-)
trnaw-cca_4 NA coding downstream 307842 1414668 ~ 1414739 (-)
mlphb LOC108261129 coding upstream 458 1723257 ~ 1747031 (-)
cops8 cops8,LOC106581673,LOC107725246,LOC107723689,LOC107685920 coding upstream 135463 1858262 ~ 1871493 (-)
trim63b trim63b,LOC100194566,LOC100505419 coding upstream 139354 1862153 ~ 1863790 (-)
ranbp2 LOC108261082,LOC108440489 coding upstream 227333 1950132 ~ 1986039 (-)
lims2 LOC108261084,LOC108440488,LOC105898085 coding upstream 265741 1988540 ~ 1998073 (-)
G75814 NA non-coding downstream 65733 1656373 ~ 1656848 (-)
G75740 NA non-coding downstream 254682 1467662 ~ 1467899 (-)
G75739 NA non-coding downstream 267294 1454999 ~ 1455287 (-)
G75737 NA non-coding downstream 289354 1433022 ~ 1433227 (-)
G75736 NA non-coding downstream 308404 1413842 ~ 1414177 (-)
G75889 col6a3,LOC108262369 non-coding upstream 78473 1801272 ~ 1819183 (-)
G75880 NA non-coding upstream 126438 1849237 ~ 1873669 (-)
G75925 NA non-coding upstream 188397 1911196 ~ 1917438 (-)
G75926 NA non-coding upstream 190332 1913131 ~ 1925253 (-)
G75927 NA non-coding upstream 191218 1914017 ~ 1914729 (-)
trnar-ucu_7 NA other downstream 48008 1674484 ~ 1674573 (-)
trnat-agu_8 NA other downstream 48396 1674112 ~ 1674185 (-)
trnar-ucu_6 NA other downstream 59972 1662520 ~ 1662609 (-)
trnat-agu_7 NA other downstream 72455 1650053 ~ 1650126 (-)
trnar-ucu_5 NA other downstream 83729 1638763 ~ 1638852 (-)
G75893 col6a3,LOC108262369,LOC106600155 other upstream 75183 1797982 ~ 1803645 (-)
LOC113547075 slc5a7,LOC108440498,LOC106586545,LOC106582186,LOC107733037 other upstream 324980 2047779 ~ 2064298 (-)
ifngr2 NA other upstream 961709 2684508 ~ 2753806 (-)
LOC113541352 c6h21orf62 other upstream 1078207 2801006 ~ 2805863 (-)
faima faima,LOC108266416,LOC108425966,LOC102793570,LOC107723686,LOC107567769,LOC101481285 other upstream 2064157 3786956 ~ 3816059 (-)

Expression


Co-expression Network