G75947


Basic Information

Item Value
gene id G75947
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 1945973 ~ 1946176 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU90126
AGGACCGGAATGTACTGTCCAGAGCGGTGAGGACAGCGGAGAAGACCATCAGGACTTCTCTCCCCTGCATCACATACAtcacagagagactcaggaggagtttctaccTTCAGGCAATCCAGCTACTGAATGAGGACACTTGAGAAATCTGCATATtactacctcacacacagacacacatacacaaacagttgCACTATGGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90126 True 204 lncRNA 0.49 1 1945973 1946176

Neighbor

gene id symbol gene type direction distance location
cops8 cops8,LOC106581673,LOC107725246,LOC107723689,LOC107685920 coding downstream 74480 1858262 ~ 1871493 (-)
trim63b trim63b,LOC100194566,LOC100505419 coding downstream 82183 1862153 ~ 1863790 (-)
mlphb LOC108261129 coding downstream 198942 1723257 ~ 1747031 (-)
med4 med4,LOC107673119,LOC107709409,LOC107724027 coding downstream 321924 1615900 ~ 1624049 (-)
trnal-caa_7 NA coding downstream 377116 1568745 ~ 1568857 (-)
ranbp2 LOC108261082,LOC108440489 coding upstream 3956 1950132 ~ 1986039 (-)
lims2 LOC108261084,LOC108440488,LOC105898085 coding upstream 42364 1988540 ~ 1998073 (-)
LOC113546994 LOC108261078 coding upstream 123371 2069547 ~ 2080413 (-)
LOC113540088 LOC108191725,LOC101885398,LOC107661227 coding upstream 288634 2234810 ~ 2246620 (-)
LOC113540058 LOC108266598,LOC108413855,LOC101471943,LOC107700103,LOC100693874 coding upstream 535418 2481594 ~ 2522385 (-)
G75926 NA non-coding downstream 20720 1913131 ~ 1925253 (-)
G75925 NA non-coding downstream 28535 1911196 ~ 1917438 (-)
G75927 NA non-coding downstream 31244 1914017 ~ 1914729 (-)
G75880 NA non-coding downstream 72304 1849237 ~ 1873669 (-)
G75889 col6a3,LOC108262369 non-coding downstream 126790 1801272 ~ 1819183 (-)
G76013 NA non-coding upstream 168014 2114190 ~ 2114599 (-)
G76057 NA non-coding upstream 325691 2271867 ~ 2274639 (-)
G76060 NA non-coding upstream 354545 2300721 ~ 2300940 (-)
G76093 NA non-coding upstream 503543 2449719 ~ 2450949 (-)
G76333 NA non-coding upstream 584478 2530654 ~ 2530992 (-)
G75893 col6a3,LOC108262369,LOC106600155 other downstream 142328 1797982 ~ 1803645 (-)
trnar-ucu_7 NA other downstream 271400 1674484 ~ 1674573 (-)
trnat-agu_8 NA other downstream 271788 1674112 ~ 1674185 (-)
trnar-ucu_6 NA other downstream 283364 1662520 ~ 1662609 (-)
trnat-agu_7 NA other downstream 295847 1650053 ~ 1650126 (-)
LOC113547075 slc5a7,LOC108440498,LOC106586545,LOC106582186,LOC107733037 other upstream 101603 2047779 ~ 2064298 (-)
ifngr2 NA other upstream 738332 2684508 ~ 2753806 (-)
LOC113541352 c6h21orf62 other upstream 854830 2801006 ~ 2805863 (-)
faima faima,LOC108266416,LOC108425966,LOC102793570,LOC107723686,LOC107567769,LOC101481285 other upstream 1840780 3786956 ~ 3816059 (-)
G77283 NA other upstream 2893784 4839960 ~ 4844879 (-)

Expression


Co-expression Network