G76455


Basic Information

Item Value
gene id G76455
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 2936081 ~ 2936563 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU90778
GTTCATTctgccagtgtgtgtagtgtgtagtgtagttgtgtagttgtgccATGGCCCATAGTGTTcattctgtcagtgtgtgtagtgtgtagtgtagttgtgtagttgtgccATGGCCCATGGTGTTcattctgtcagtgtgtgtagtgtgtagttgtgtagttgtgccATGGCCCATAGTGTTCATTctgccagtgtgtgtagtgtgtagttgtgtagttgtgccATGGCCCATAGTGTTCATTctgccagtgtgtgtagtgtgtagtgtagttgtgtagttgtgccATGGCCCATAGTGTTCATTctgccagtgtgtgtagtgtgtagttgtgtagttgtgccATGGCCCATAGTGTTCATTctgccagtgtgtgtagtgtgtagttgtgtagttgtgccATGGCCCATAGTGTTcattctgtcagtgtgtgtagtgtgtagtgtagttgtgtagttgtgccATGACCCATAGTGTTCATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU90778 True 483 lncRNA 0.46 1 2936081 2936563

Neighbor

gene id symbol gene type direction distance location
c5h2orf69 c6h2orf69 coding downstream 16074 2919306 ~ 2920007 (-)
tyw5 tyw5,LOC107725219,LOC107728297 coding downstream 106260 2823816 ~ 2829821 (-)
crfb1 NA coding downstream 137079 2775840 ~ 2799002 (-)
LOC113540598 NA coding downstream 163692 2760250 ~ 2772389 (-)
LOC113541336 LOC108266841 coding downstream 175875 2745336 ~ 2760206 (-)
trnas-cga NA coding upstream 2758 2939321 ~ 2939402 (-)
cavin2a sdpr coding upstream 7711 2944274 ~ 2960366 (-)
tmeff2a tmeff2,tmeff2a,LOC107670719,LOC107728299 coding upstream 32117 2968680 ~ 3060237 (-)
dnah7 dnah7 coding upstream 697429 3633992 ~ 3745382 (-)
parp14rs1 LOC108266413 coding upstream 833671 3770234 ~ 3784393 (-)
G76400 stk17b non-coding downstream 19034 2914400 ~ 2917047 (-)
LOC117597440 NA non-coding downstream 38877 2893376 ~ 2897204 (-)
G76325 mink1,LOC108427066 non-coding downstream 376929 2556506 ~ 2559152 (-)
G76333 NA non-coding downstream 405089 2530654 ~ 2530992 (-)
G76093 NA non-coding downstream 485132 2449719 ~ 2450949 (-)
G76462 NA non-coding upstream 28703 2965266 ~ 2966533 (-)
G76570 NA non-coding upstream 656255 3592818 ~ 3595411 (-)
G76658 NA non-coding upstream 914833 3851396 ~ 3852207 (-)
G76682 NA non-coding upstream 1001231 3937794 ~ 3938000 (-)
G76688 NA non-coding upstream 1031310 3967873 ~ 3968077 (-)
LOC113541352 c6h21orf62 other downstream 130218 2801006 ~ 2805863 (-)
ifngr2 NA other downstream 182275 2684508 ~ 2753806 (-)
LOC113547075 slc5a7,LOC108440498,LOC106586545,LOC106582186,LOC107733037 other downstream 871783 2047779 ~ 2064298 (-)
G75893 col6a3,LOC108262369,LOC106600155 other downstream 1132436 1797982 ~ 1803645 (-)
trnar-ucu_7 NA other downstream 1261508 1674484 ~ 1674573 (-)
faima faima,LOC108266416,LOC108425966,LOC102793570,LOC107723686,LOC107567769,LOC101481285 other upstream 850393 3786956 ~ 3816059 (-)
G77283 NA other upstream 1903397 4839960 ~ 4844879 (-)
LOC113534947 NA other upstream 2395021 5331584 ~ 5339633 (-)
LOC117597406 LOC108266244 other upstream 3302392 6238955 ~ 6253346 (-)
LOC117597343 NA other upstream 3386480 6323043 ~ 6324680 (-)

Expression


Co-expression Network