G76796


Basic Information

Item Value
gene id G76796
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 4007437 ~ 4007795 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU91182
tgacGTCACTCTCCACCCCATGTCGTCCAAATCGTATCAAATCGGTGCCGTTCGTTTGTGCTCGACTTGTGCCGGTTTGTGCTGTTAAAAGAAACGCGGTTACAAGGATTCTTTcttaaatataacaaacaacTAACCTTCCTTCAGGTGCCGTTACGTCACTCTCCATCCCACGTCGTCTAAATCGCTTCTGTTTTGTGCCGTAGAAAGAAACAACATAACTTGTTCCCATCTTTAGACATTAGCTATGTTTAGACTTCACGCGGCGCTGCACAGACCGATCGGCGTAGACACCGAAGTACCGCGAGAACGATTGGAGAACTACGCAGTACTGATCGCACAACTACGTTGTTTCTTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU91182 True 359 lncRNA 0.47 1 4007437 4007795

Neighbor

gene id symbol gene type direction distance location
gypc NA coding downstream 84163 3892480 ~ 3923274 (-)
parp14rs1 LOC108266413 coding downstream 223044 3770234 ~ 3784393 (-)
dnah7 dnah7 coding downstream 262055 3633992 ~ 3745382 (-)
tmeff2a tmeff2,tmeff2a,LOC107670719,LOC107728299 coding downstream 947200 2968680 ~ 3060237 (-)
cavin2a sdpr coding downstream 1047071 2944274 ~ 2960366 (-)
sfrp2 NA coding upstream 282277 4290072 ~ 4294136 (-)
LOC113535176 NA coding upstream 325100 4332895 ~ 4333842 (-)
tmem163a tmem163a,LOC108266155,LOC107725256,LOC108425930,LOC107658221,LOC107684456,LOC107555363 coding upstream 406248 4414043 ~ 4469641 (-)
map3k19 map3k19 coding upstream 497496 4505291 ~ 4515439 (-)
mmadhcb mmadhc coding upstream 640425 4648220 ~ 4655253 (-)
G76794 NA non-coding downstream 1529 4005694 ~ 4005908 (-)
G76688 NA non-coding downstream 39360 3967873 ~ 3968077 (-)
G76682 NA non-coding downstream 69437 3937794 ~ 3938000 (-)
G76658 NA non-coding downstream 155230 3851396 ~ 3852207 (-)
G76570 NA non-coding downstream 412026 3592818 ~ 3595411 (-)
G76813 NA non-coding upstream 35139 4042934 ~ 4043196 (-)
G76845 NA non-coding upstream 234458 4242253 ~ 4242524 (-)
G76852 NA non-coding upstream 257858 4265653 ~ 4270345 (-)
G76858 NA non-coding upstream 275758 4283553 ~ 4284394 (-)
G76860 NA non-coding upstream 277828 4285623 ~ 4285823 (-)
faima faima,LOC108266416,LOC108425966,LOC102793570,LOC107723686,LOC107567769,LOC101481285 other downstream 191378 3786956 ~ 3816059 (-)
LOC113541352 c6h21orf62 other downstream 1201574 2801006 ~ 2805863 (-)
ifngr2 NA other downstream 1253631 2684508 ~ 2753806 (-)
LOC113547075 slc5a7,LOC108440498,LOC106586545,LOC106582186,LOC107733037 other downstream 1943139 2047779 ~ 2064298 (-)
G75893 col6a3,LOC108262369,LOC106600155 other downstream 2203792 1797982 ~ 1803645 (-)
G77283 NA other upstream 832165 4839960 ~ 4844879 (-)
LOC113534947 NA other upstream 1323789 5331584 ~ 5339633 (-)
LOC117597406 LOC108266244 other upstream 2231160 6238955 ~ 6253346 (-)
LOC117597343 NA other upstream 2315248 6323043 ~ 6324680 (-)
G78058 LOC108266211,LOC108266891,LOC108262141,LOC108266899,LOC108266212,LOC108266919,LOC108266892,LOC108262627,LOC108266242,LOC108266894,LOC108266896,LOC108266893,LOC108266912,LOC108266890 other upstream 2521251 6529046 ~ 6615660 (-)

Expression


Co-expression Network