G77719


Basic Information

Item Value
gene id G77719
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 6118931 ~ 6119138 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU92243
CAAAAACATCAAGTCTGATGCCTTGTCCCGCGTTTTTGATCGTCCCGATTGGCAGACCACTCCTGAGCTTATTTTACCCGAGAGACTTGTGGTCTCCACCATCACTTGGGAGATTGAGTCTAAGGTCCGCACGGCCTTACAAGGGGTAACTCCTCTGTCTGGGTGCCCACCAGGTCGGTTATTTGTGCCGGAGATTTTAAGGTCAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU92243 True 208 lncRNA 0.51 1 6118931 6119138

Neighbor

gene id symbol gene type direction distance location
arhgap15 arhgap15 coding downstream 636956 5440481 ~ 5481975 (-)
acvr2aa LOC108266626,LOC108412453,LOC107709421,LOC107673126 coding downstream 960109 5115388 ~ 5158822 (-)
epc2 epc2 coding downstream 1015409 5091309 ~ 5103522 (-)
ubxn4 ubxn4 coding downstream 1258581 4850639 ~ 4860350 (-)
nmi nmi coding downstream 1289419 4822232 ~ 4829512 (-)
LOC113534858 LOC108266244 coding upstream 106716 6225854 ~ 6243712 (-)
LOC117597339 NA coding upstream 109070 6228208 ~ 6231192 (-)
mcf2lb LOC108266232,LOC108430488 coding upstream 289023 6408161 ~ 6431124 (-)
LOC113534875 rnf17 coding upstream 332226 6451364 ~ 6708475 (-)
LOC113534871 LOC108262141,LOC108266212,LOC108266893,LOC108266891,LOC108266894,LOC108266892,LOC108266896,LOC108266899,LOC108266890 coding upstream 363207 6482345 ~ 6485575 (-)
G77645 efnb2 non-coding downstream 545547 5569857 ~ 5573384 (-)
G77629 NA non-coding downstream 570766 5493317 ~ 5548165 (-)
G77540 NA non-coding downstream 704155 5414341 ~ 5414776 (-)
G77511 LOC108266643,LOC108438030 non-coding downstream 736660 5380298 ~ 5382271 (-)
G77496 NA non-coding downstream 787544 5330898 ~ 5331387 (-)
G77763 NA non-coding upstream 83431 6202569 ~ 6202773 (-)
LOC117597312 NA non-coding upstream 134732 6253870 ~ 6255150 (-)
G77797 NA non-coding upstream 161861 6280999 ~ 6281424 (-)
G77799 NA non-coding upstream 170659 6289797 ~ 6290011 (-)
G77840 NA non-coding upstream 206961 6326099 ~ 6328085 (-)
LOC113534947 NA other downstream 779298 5331584 ~ 5339633 (-)
G77283 NA other downstream 1274052 4839960 ~ 4844879 (-)
faima faima,LOC108266416,LOC108425966,LOC102793570,LOC107723686,LOC107567769,LOC101481285 other downstream 2302872 3786956 ~ 3816059 (-)
LOC113541352 c6h21orf62 other downstream 3313068 2801006 ~ 2805863 (-)
ifngr2 NA other downstream 3365125 2684508 ~ 2753806 (-)
LOC117597406 LOC108266244 other upstream 119817 6238955 ~ 6253346 (-)
LOC117597343 NA other upstream 203905 6323043 ~ 6324680 (-)
G78058 LOC108266211,LOC108266891,LOC108262141,LOC108266899,LOC108266212,LOC108266919,LOC108266892,LOC108262627,LOC108266242,LOC108266894,LOC108266896,LOC108266893,LOC108266912,LOC108266890 other upstream 409908 6529046 ~ 6615660 (-)
LOC113534870 LOC108266896,LOC108266892,LOC108266899,LOC108266891,LOC108266212,LOC108266894,LOC108266242,LOC108266893,LOC108266890,LOC108262141 other upstream 423295 6542433 ~ 6545953 (-)
G78159 NA other upstream 924649 7043787 ~ 7046809 (-)

Expression


Co-expression Network