G77763


Basic Information

Item Value
gene id G77763
gene name NA
gene type non-coding
species striped catfish (Pangasianodon hypophthalmus)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_047599.1
NCBI id CM018545.1
chromosome length 32114633
location 6202569 ~ 6202773 (-)
genome version GENO_Phyp_1.0_2019_striped_catfish_Genome

Sequence

>TU92287
gtatggggctgtgtagccacagacctgtcagagtgcccatgctgacctctgtccactgccaaaagtgcctacaatggacaggtgagcatcagaactggaccacggagcaatggaagaaggtggcctggtccgataaatcacattttcttttacatcatgtggaaggccgggtgcgtgtgcatcatttaccaggggaagagatggc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU92287 True 205 lncRNA 0.53 1 6202569 6202773

Neighbor

gene id symbol gene type direction distance location
arhgap15 arhgap15 coding downstream 720594 5440481 ~ 5481975 (-)
acvr2aa LOC108266626,LOC108412453,LOC107709421,LOC107673126 coding downstream 1043747 5115388 ~ 5158822 (-)
epc2 epc2 coding downstream 1099047 5091309 ~ 5103522 (-)
ubxn4 ubxn4 coding downstream 1342219 4850639 ~ 4860350 (-)
nmi nmi coding downstream 1373057 4822232 ~ 4829512 (-)
LOC113534858 LOC108266244 coding upstream 23081 6225854 ~ 6243712 (-)
LOC117597339 NA coding upstream 25435 6228208 ~ 6231192 (-)
mcf2lb LOC108266232,LOC108430488 coding upstream 205388 6408161 ~ 6431124 (-)
LOC113534875 rnf17 coding upstream 248591 6451364 ~ 6708475 (-)
LOC113534871 LOC108262141,LOC108266212,LOC108266893,LOC108266891,LOC108266894,LOC108266892,LOC108266896,LOC108266899,LOC108266890 coding upstream 279572 6482345 ~ 6485575 (-)
G77719 NA non-coding downstream 83431 6118931 ~ 6119138 (-)
G77645 efnb2 non-coding downstream 629185 5569857 ~ 5573384 (-)
G77629 NA non-coding downstream 654404 5493317 ~ 5548165 (-)
G77540 NA non-coding downstream 787793 5414341 ~ 5414776 (-)
G77511 LOC108266643,LOC108438030 non-coding downstream 820298 5380298 ~ 5382271 (-)
LOC117597312 NA non-coding upstream 51097 6253870 ~ 6255150 (-)
G77797 NA non-coding upstream 78226 6280999 ~ 6281424 (-)
G77799 NA non-coding upstream 87024 6289797 ~ 6290011 (-)
G77840 NA non-coding upstream 123326 6326099 ~ 6328085 (-)
LOC117597449 NA non-coding upstream 330677 6533450 ~ 6536271 (-)
LOC113534947 NA other downstream 862936 5331584 ~ 5339633 (-)
G77283 NA other downstream 1357690 4839960 ~ 4844879 (-)
faima faima,LOC108266416,LOC108425966,LOC102793570,LOC107723686,LOC107567769,LOC101481285 other downstream 2386510 3786956 ~ 3816059 (-)
LOC113541352 c6h21orf62 other downstream 3396706 2801006 ~ 2805863 (-)
ifngr2 NA other downstream 3448763 2684508 ~ 2753806 (-)
LOC117597406 LOC108266244 other upstream 36182 6238955 ~ 6253346 (-)
LOC117597343 NA other upstream 120270 6323043 ~ 6324680 (-)
G78058 LOC108266211,LOC108266891,LOC108262141,LOC108266899,LOC108266212,LOC108266919,LOC108266892,LOC108262627,LOC108266242,LOC108266894,LOC108266896,LOC108266893,LOC108266912,LOC108266890 other upstream 326273 6529046 ~ 6615660 (-)
LOC113534870 LOC108266896,LOC108266892,LOC108266899,LOC108266891,LOC108266212,LOC108266894,LOC108266242,LOC108266893,LOC108266890,LOC108262141 other upstream 339660 6542433 ~ 6545953 (-)
G78159 NA other upstream 841014 7043787 ~ 7046809 (-)

Expression


Co-expression Network